Personal tools

FFCP PHASE1:Mm9::chr6:144997269..144997325,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:144997269..144997325,-
|DHSsupport=NA
|short_description=p1@Bcat1
|DPIdataset=NA
|description=CAGE_peak_1_at_Bcat1_5end
|association_with_transcript=6bp_to_ENSMUST00000032402,ENSMUST00000087468,NM_001024468,uc009eqs.2_5end
|EntrezGene=12035
|EntrezGene=12035
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8CBC8,F8WIH8
|UniProt=Q8CBC8,F8WIH8
|association_with_transcript=6bp_to_ENSMUST00000032402,ENSMUST00000087468,NM_001024468,uc009eqs.2_5end
|cluster_id=chr6:144997269..144997325,-
|description=CAGE_peak_1_at_Bcat1_5end
|id=chr6:144997269..144997325,-
|ontology_enrichment_celltype=CL:0000117!7.94e-17!23;CL:0000337!7.94e-17!23;CL:0000540!3.50e-16!33;CL:0000047!3.50e-16!33;CL:0000031!3.50e-16!33;CL:0000404!3.50e-16!33;CL:0000221!5.80e-15!44;CL:0000133!5.80e-15!44;CL:0002319!6.35e-15!43;CL:0000393!6.46e-12!39;CL:0000211!6.46e-12!39;CL:0000055!5.98e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.84e-21,23;CL:0000337,5.84e-21,23;CL:0000540,1.84e-16,33;CL:0000047,1.84e-16,33;CL:0000031,1.84e-16,33;CL:0000404,1.84e-16,33;CL:0002319,4.32e-13,43;CL:0000221,1.55e-12,44;CL:0000133,1.55e-12,44;CL:0000393,2.83e-12,39;CL:0000211,2.83e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.06e-31!73;UBERON:0005743!1.06e-31!73;UBERON:0000073!1.15e-31!75;UBERON:0001016!1.15e-31!75;UBERON:0002346!4.46e-31!71;UBERON:0003075!4.46e-31!71;UBERON:0007284!4.46e-31!71;UBERON:0004121!8.44e-31!102;UBERON:0000924!8.44e-31!102;UBERON:0006601!8.44e-31!102;UBERON:0000033!1.46e-26!63;UBERON:0001049!5.07e-26!52;UBERON:0005068!5.07e-26!52;UBERON:0006241!5.07e-26!52;UBERON:0007135!5.07e-26!52;UBERON:0000955!1.10e-24!50;UBERON:0006238!1.10e-24!50;UBERON:0002616!5.08e-24!49;UBERON:0003056!1.41e-23!49;UBERON:0002020!2.00e-21!34;UBERON:0003080!8.48e-20!40;UBERON:0002780!5.45e-19!39;UBERON:0001890!5.45e-19!39;UBERON:0006240!5.45e-19!39;UBERON:0002791!8.44e-18!29;UBERON:0003528!8.44e-18!29;UBERON:0001893!8.44e-18!29;UBERON:0007811!6.13e-13!86;UBERON:0000956!3.87e-12!21;UBERON:0001869!3.87e-12!21;UBERON:0000203!3.87e-12!21;UBERON:0000153!1.31e-11!94;UBERON:0002619!4.86e-10!17;UBERON:0002021!2.28e-07!10;UBERON:0000411!2.28e-07!10;UBERON:0001950!2.28e-07!10;UBERON:0002420!5.94e-07!8;UBERON:0007245!5.94e-07!8;UBERON:0010009!5.94e-07!8;UBERON:0010011!5.94e-07!8;UBERON:0000454!5.94e-07!8;UBERON:0003076!9.23e-07!12;UBERON:0003057!9.23e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.07e-36,64;UBERON:0003075,4.07e-36,64;UBERON:0007284,4.07e-36,64;UBERON:0001017,3.96e-34,73;UBERON:0000073,1.29e-33,54;UBERON:0001016,1.39e-32,75;UBERON:0001049,2.48e-31,52;UBERON:0005068,2.48e-31,52;UBERON:0006241,2.48e-31,52;UBERON:0007135,2.48e-31,52;UBERON:0004121,1.06e-30,95;UBERON:0000924,1.06e-30,95;UBERON:0006601,1.06e-30,95;UBERON:0003056,5.22e-29,49;UBERON:0010371,7.16e-29,73;UBERON:0002020,8.20e-27,34;UBERON:0000955,1.67e-26,47;UBERON:0006238,1.67e-26,47;UBERON:0002616,1.09e-25,46;UBERON:0003080,3.35e-24,40;UBERON:0002780,3.53e-23,39;UBERON:0001890,3.53e-23,39;UBERON:0006240,3.53e-23,39;UBERON:0003528,3.38e-22,29;UBERON:0002791,3.38e-22,29;UBERON:0001893,3.38e-22,29;UBERON:0010314,1.78e-21,92;UBERON:0000956,5.34e-15,21;UBERON:0001869,5.34e-15,21;UBERON:0000203,5.34e-15,21;UBERON:0002619,2.48e-12,17;UBERON:0002021,6.05e-09,10;UBERON:0000411,6.05e-09,10;UBERON:0001950,6.05e-09,10;UBERON:0002420,2.04e-08,8;UBERON:0007245,2.04e-08,8;UBERON:0010009,2.04e-08,8;UBERON:0010011,2.04e-08,8;UBERON:0000454,2.04e-08,8;UBERON:0003076,1.80e-07,12;UBERON:0003057,1.80e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.09843091367236,1.74986909166855,1.1198913730029,1.43752564364972,0,0,0,0,0.286533439938757,0,60.2903053361601,68.2398363260922,70.9891171926921,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0.768436610643109,13.5833392124106,17.9557897981149,15.1433972172995,57.1301968807607,52.566712746484,28.1728838194394,21.6610764501214,32.1726575313507,126.633263149297,81.592209036435,85.2516259572151,60.6676923558892,49.4948151889036,53.1331637967895,99.668330643493,109.175946346146,81.1358695694862,71.5947462701013,51.3961767684762,47.5318586854516,0.227178579999552,0.831287161174641,0,0,0,0,0,0,1.96622188184453,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,0.693941307064543,3.04465478312141,0.461230994512117,1.20578112442098,1.76383060703557,0.251333182659351,0.247194967734374,0,0,0,0,0,0,16.9812862266697,15.2896095973822,0,0,0,0,96.7647530555155,45.292559679044,24.6282530141214,38.7628234028777,34.7773021969249,71.0635112393695,49.1591027095306,0.101839363850316,0,0,3.36706969418358,2.47228841629137,5.9774547152703,3.24111833649629,4.37043971723574,5.17077393550092,9.09607414022434,7.30873451565885,10.3481348295606,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,0,0,0,0,0,0,0,1.24275463521301,0.703578179943289,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0,0,0,0,35.1184214102093,9.36431972651488,0,0,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.569003702859245,0.342745537829186,0,0,0.775809948670503,0.210407459670956,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.3624526637373,68.2172015966622,0,0,0.631016438832513,1.56175497718655,2.36965737506079,0.716906393857656,0.222798674082394,1.41538265394416,0.404810701674894,2.33804686329049,1.97643888973262,37.2732727049296,2.98074178937364,0.890328018336276,0.488660878060728,0.989820737835213,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,2.88097750450096,1.29358683782755,0.428674070063185,0,1.60531935841864,2.96188237083818,2.74018454203139,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,55.0713146971214,0,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,1.04544148007234,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.496375471371293,0,0,0.337912250981556,0.938857909166032,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0.167884616364078,0.19318959403219,1.50145980360946,0.73260649706906,1.07184189539533,0,35.5793660848752,29.4608151364593,37.2382083735608,27.1528028103026,39.7347861466973,43.8128460486026,39.8263275136765,45.032120322422,47.5799529433415,55.4003533574447,3.1136204275253,5.58634822761443,3.41467211508268,5.10524105843418,5.24032906569956,3.67687016900028,5.33392146723877,3.29656091582231,3.85103051510178,3.03236654116557,4.30914809813408,6.97917463128482,2.80924522409647,3.64943368707755,4.53740204749345,2.85776214769844,4.1718357340148,4.82273051159263,3.29668720642645,4.12156976376312,2.74295401908332,5.14679837862079,3.33810665926249,4.50573891560218,3.57615645578256,4.65380343404221,3.10977553883713,4.99832451731901,4.07412341537585,7.85599180320834,3.32178050747688,3.94017929502254,3.6830793885272,3.71848418846318,1.73615949883027,10.7418548513317,4.44470056046276,1.50409737833809,3.06061331310149,1.32354851471709,1.85494268496337
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.09843091367236,1.74986909166855,1.1198913730029,1.43752564364972,0,0,0,0,0.286533439938757,0,60.2903053361601,68.2398363260922,70.9891171926921,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0.768436610643109,13.5833392124106,17.9557897981149,15.1433972172995,57.1301968807607,52.566712746484,28.1728838194394,21.6610764501214,32.1726575313507,126.633263149297,81.592209036435,85.2516259572151,60.6676923558892,49.4948151889036,53.1331637967895,99.668330643493,109.175946346146,81.1358695694862,71.5947462701013,51.3961767684762,47.5318586854516,0.227178579999552,0.831287161174641,0,0,0,0,0,0,1.96622188184453,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,0.693941307064543,3.04465478312141,0.461230994512117,1.20578112442098,1.76383060703557,0.251333182659351,0.247194967734374,0,0,0,0,0,0,16.9812862266697,15.2896095973822,0,0,0,0,96.7647530555155,45.292559679044,24.6282530141214,38.7628234028777,34.7773021969249,71.0635112393695,49.1591027095306,0.101839363850316,0,0,3.36706969418358,2.47228841629137,5.9774547152703,3.24111833649629,4.37043971723574,5.17077393550092,9.09607414022434,7.30873451565885,10.3481348295606,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,0,0,0,0,0,0,0,1.24275463521301,0.703578179943289,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0,0,0,0,35.1184214102093,9.36431972651488,0,0,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.569003702859245,0.342745537829186,0,0,0.775809948670503,0.210407459670956,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.3624526637373,68.2172015966622,0,0,0.631016438832513,1.56175497718655,2.36965737506079,0.716906393857656,0.222798674082394,1.41538265394416,0.404810701674894,2.33804686329049,1.97643888973262,37.2732727049296,2.98074178937364,0.890328018336276,0.488660878060728,0.989820737835213,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,2.88097750450096,1.29358683782755,0.428674070063185,0,1.60531935841864,2.96188237083818,2.74018454203139,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,55.0713146971214,0,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,1.04544148007234,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.496375471371293,0,0,0.337912250981556,0.938857909166032,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0.167884616364078,0.19318959403219,1.50145980360946,0.73260649706906,1.07184189539533,0,35.5793660848752,29.4608151364593,37.2382083735608,27.1528028103026,39.7347861466973,43.8128460486026,39.8263275136765,45.032120322422,47.5799529433415,55.4003533574447,3.1136204275253,5.58634822761443,3.41467211508268,5.10524105843418,5.24032906569956,3.67687016900028,5.33392146723877,3.29656091582231,3.85103051510178,3.03236654116557,4.30914809813408,6.97917463128482,2.80924522409647,3.64943368707755,4.53740204749345,2.85776214769844,4.1718357340148,4.82273051159263,3.29668720642645,4.12156976376312,2.74295401908332,5.14679837862079,3.33810665926249,4.50573891560218,3.57615645578256,4.65380343404221,3.10977553883713,4.99832451731901,4.07412341537585,7.85599180320834,3.32178050747688,3.94017929502254,3.6830793885272,3.71848418846318,1.73615949883027,10.7418548513317,4.44470056046276,1.50409737833809,3.06061331310149,1.32354851471709,1.85494268496337
|short_description=p1@Bcat1
}}
}}

Latest revision as of 21:55, 26 September 2015

Short description:p1@Bcat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bcat1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 6bp_to_ENSMUST00000032402, ENSMUST00000087468, NM_001024468, uc009eqs.2_5end
EntrezGene:Bcat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bcat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C360.29
Mouse Granule cells, donor2.CNhs12357.11731-123E368.24
Mouse Granule cells, donor3.CNhs12108.11636-122C770.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F157.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D552.57
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3126.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F381.59
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D785.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D460.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F449.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E499.67
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5109.18
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I681.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E147.53
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I215.29
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A496.76
corpus striatum, adult.CNhs10487.19-21D845.29
corpus striatum, neonate N00.CNhs11226.630-43F124.63
cortex, adult.CNhs10473.12-14D538.76
cortex, neonate N30.CNhs11107.1392-42F234.78
diencephalon, adult.CNhs10482.20-12F271.06
diencephalon, neonate N30.CNhs11201.1388-42B249.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C65.17
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E835.12
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C282.36
medulla oblongata, neonate N30.CNhs11200.1396-42A368.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I937.27
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C955.07
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A955.40
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.84e-2123
neuroblast (sensu Vertebrata)5.84e-2123
neuron1.84e-1633
neuronal stem cell1.84e-1633
neuroblast1.84e-1633
electrically signaling cell1.84e-1633
neural cell4.32e-1343
ectodermal cell1.55e-1244
neurectodermal cell1.55e-1244
electrically responsive cell2.83e-1239
electrically active cell2.83e-1239

Uber anatomy
Ontology termp-valuen
neurectoderm4.07e-3664
neural plate4.07e-3664
presumptive neural plate4.07e-3664
central nervous system3.96e-3473
regional part of nervous system1.29e-3354
nervous system1.39e-3275
neural tube2.48e-3152
neural rod2.48e-3152
future spinal cord2.48e-3152
neural keel2.48e-3152
ectoderm-derived structure1.06e-3095
ectoderm1.06e-3095
presumptive ectoderm1.06e-3095
pre-chordal neural plate5.22e-2949
ecto-epithelium7.16e-2973
gray matter8.20e-2734
brain1.67e-2647
future brain1.67e-2647
regional part of brain1.09e-2546
anterior neural tube3.35e-2440
regional part of forebrain3.53e-2339
forebrain3.53e-2339
future forebrain3.53e-2339
brain grey matter3.38e-2229
regional part of telencephalon3.38e-2229
telencephalon3.38e-2229
structure with developmental contribution from neural crest1.78e-2192
cerebral cortex5.34e-1521
cerebral hemisphere5.34e-1521
pallium5.34e-1521
regional part of cerebral cortex2.48e-1217
occipital lobe6.05e-0910
visual cortex6.05e-0910
neocortex6.05e-0910
basal ganglion2.04e-088
nuclear complex of neuraxis2.04e-088
aggregate regional part of brain2.04e-088
collection of basal ganglia2.04e-088
cerebral subcortex2.04e-088
posterior neural tube1.80e-0712
chordal neural plate1.80e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:144997269..144997325,-&oldid=4276432"