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FFCP PHASE1:Mm9::chr6:126690645..126690699,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:126690645..126690699,-
|DHSsupport=NA
|short_description=p1@Kcna6
|DPIdataset=NA
|description=CAGE_peak_1_at_Kcna6_5end
|association_with_transcript=0bp_to_ENSMUST00000040751,NM_013568,uc009dvc.2,uc009dvd.2_5end
|EntrezGene=16494
|EntrezGene=16494
|HGNC=
|HGNC=
|MCL_coexpression_id=1605
|TSSclassifier=NA
|UniProt=Q61923
|UniProt=Q61923
|association_with_transcript=0bp_to_ENSMUST00000040751,NM_013568,uc009dvc.2,uc009dvd.2_5end
|cluster_id=chr6:126690645..126690699,-
|description=CAGE_peak_1_at_Kcna6_5end
|id=chr6:126690645..126690699,-
|ontology_enrichment_celltype=CL:0000221!4.55e-19!44;CL:0000133!4.55e-19!44;CL:0002319!2.21e-18!43;CL:0000540!2.18e-17!33;CL:0000047!2.18e-17!33;CL:0000031!2.18e-17!33;CL:0000404!2.18e-17!33;CL:0000055!1.12e-12!50;CL:0000393!6.04e-12!39;CL:0000211!6.04e-12!39;CL:0000117!4.97e-11!23;CL:0000337!4.97e-11!23;CL:0000107!2.78e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000221,7.84e-20,44;CL:0000133,7.84e-20,44;CL:0002319,4.35e-19,43;CL:0000540,6.35e-19,33;CL:0000047,6.35e-19,33;CL:0000031,6.35e-19,33;CL:0000404,6.35e-19,33;CL:0000393,2.87e-13,39;CL:0000211,2.87e-13,39;CL:0000117,6.01e-12,23;CL:0000337,6.01e-12,23;CL:0000107,7.70e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.56e-33!75;UBERON:0001016!8.56e-33!75;UBERON:0001017!1.41e-31!73;UBERON:0005743!1.41e-31!73;UBERON:0004121!1.97e-30!102;UBERON:0000924!1.97e-30!102;UBERON:0006601!1.97e-30!102;UBERON:0002346!2.20e-22!71;UBERON:0003075!2.20e-22!71;UBERON:0007284!2.20e-22!71;UBERON:0000033!1.11e-19!63;UBERON:0001049!1.17e-19!52;UBERON:0005068!1.17e-19!52;UBERON:0006241!1.17e-19!52;UBERON:0007135!1.17e-19!52;UBERON:0000955!3.66e-18!50;UBERON:0006238!3.66e-18!50;UBERON:0002616!8.93e-18!49;UBERON:0002020!5.21e-16!34;UBERON:0003056!1.36e-15!49;UBERON:0003080!1.66e-14!40;UBERON:0002780!7.35e-14!39;UBERON:0001890!7.35e-14!39;UBERON:0006240!7.35e-14!39;UBERON:0002791!6.89e-13!29;UBERON:0003528!6.89e-13!29;UBERON:0001893!6.89e-13!29;UBERON:0000153!7.43e-10!94;UBERON:0000468!2.27e-09!333;UBERON:0000956!5.12e-09!21;UBERON:0001869!5.12e-09!21;UBERON:0000203!5.12e-09!21;UBERON:0007811!2.08e-08!86;UBERON:0002619!2.44e-08!17;UBERON:0000010!3.56e-08!11;UBERON:0002410!2.78e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.46e-35,75;UBERON:0001017,9.49e-34,73;UBERON:0004121,3.86e-31,95;UBERON:0000924,3.86e-31,95;UBERON:0006601,3.86e-31,95;UBERON:0002346,3.93e-24,64;UBERON:0003075,3.93e-24,64;UBERON:0007284,3.93e-24,64;UBERON:0000073,3.20e-22,54;UBERON:0010371,8.78e-22,73;UBERON:0001049,9.59e-21,52;UBERON:0005068,9.59e-21,52;UBERON:0006241,9.59e-21,52;UBERON:0007135,9.59e-21,52;UBERON:0002020,2.07e-17,34;UBERON:0003056,3.73e-17,49;UBERON:0000955,4.81e-17,47;UBERON:0006238,4.81e-17,47;UBERON:0002616,1.24e-16,46;UBERON:0003080,5.69e-16,40;UBERON:0010314,2.32e-15,92;UBERON:0002780,2.93e-15,39;UBERON:0001890,2.93e-15,39;UBERON:0006240,2.93e-15,39;UBERON:0003528,5.50e-14,29;UBERON:0002791,5.50e-14,29;UBERON:0001893,5.50e-14,29;UBERON:0000956,9.68e-10,21;UBERON:0001869,9.68e-10,21;UBERON:0000203,9.68e-10,21;UBERON:0002619,5.36e-09,17;UBERON:0000010,8.12e-09,11;UBERON:0002410,7.70e-08,9;UBERON:0002021,5.33e-07,10;UBERON:0000411,5.33e-07,10;UBERON:0001950,5.33e-07,10
|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,4.83309602015838,3.11087838518853,1.39986421625363,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,0,7.28339259094552,7.93486468908049,10.1413024560989,1.35537812827653,0.889294796111139,0,0,0,14.9800055259202,14.2160772968975,3.00699875694585,3.64516033495565,2.94454945891935,28.2794474559766,22.5285911770646,3.67472397644862,3.83381884072945,5.51531271966013,18.7196997698961,21.7068474744819,26.2667171868176,10.1552441552249,9.69769022185542,5.2091337055676,16.7509799400829,14.6318278608237,19.8637722109853,26.8112012781038,22.2099822046601,9.13357284543973,5.37655972665607,21.2356083900067,0,0,0,0,0,0,0.702222100658759,0,0,0,24.5067550411424,0,0,0,0,0,0,0.45673551887624,0,0.593768556259299,2.77576522825817,3.34912026143355,2.53677046981664,3.3158980921577,3.05730638552832,0.251333182659351,0.247194967734374,0.578397427679647,0,3.72063754879041,1.54589062922275,0.969750506270444,1.86391761218122,8.49064311333487,14.0329293565015,0,0,0,0,24.7154555017957,15.0975198930147,12.3141265070607,14.0797699355744,16.8772201838018,22.0255327233134,18.6577452527921,2.24046600470696,1.11966273549084,0,1.47309299120532,2.60240885925407,2.5289231487682,1.62055916824814,3.31550599238573,3.53789795586905,3.71529788826064,4.12287588062807,6.72628763921441,4.52692785158969,3.21480336285293,6.33424046990216,3.94552318369635,4.17070873838397,6.61679116392116,4.52720700097476,2.38841120182192,0,0,0,1.86413195281952,1.17263029990548,0.540186184383045,1.65721314909647,0.983821158737019,1.07986979021165,0.930135779001631,0.268273401399619,1.28441876603886,0.658239399653922,0.656669856316381,0.891756905004413,0.584799949701329,0.219550115291051,0.402619256281115,10.3042074796422,9.98174740079059,0,0.793351699990633,1.06644125267617,1.62565670302307,1.41754207454303,0.80673409849337,0.889512175379481,2.09248188723815,0.949058123089023,1.31759163779209,1.75934646160189,0.994782360205754,1.55971269695296,0,0.864552199498777,0.597423819763102,1.13800740571849,1.48523066392647,2.25415471346161,1.01825663922657,2.13347735884388,1.96380295692892,2.02356918797623,0.590440591918409,0.470996183524124,0.370191491765402,0,0.500535317148282,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,1.51593129416388,2.11854469374634,1.18821560042632,0.704070744865506,0.837531287209079,0.952174563544055,0.975668239288994,0.630540576424764,1.32878813789265,1.11618338060241,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,21.8348802383397,18.6366581681603,0,0.504941854408746,10.0962630213202,20.3028147034252,26.7125013188671,43.2533524294119,41.4405533793253,43.876862272269,24.2886421004937,25.4262596382841,33.5994611254545,5.14114106274891,0.425820255624806,4.27357448801413,3.90928702448583,0.329940245945071,0,1.21390318077491,0.906970670894253,1.32023555829129,2.65771703592696,2.45948118355142,2.32585463851399,1.09060118843252,2.85197902707777,1.26414703174326,1.05418608574999,0,0,2.16073312837572,1.94038025674132,3.42939256050548,2.48276327099183,3.0322698992352,5.59466670047211,6.08929898229199,1.17335854031855,0.21183207086382,1.10264199027481,1.31909002353184,0.968786560175433,1.02531972377865,2.02932984805332,0.656563598980245,0,19.655082013114,0,1.65109494370578,0.370389054739423,0,0,0.228778173206523,0,0,0,0,3.79603192297362,2.43983360552218,1.51207477150522,1.67270636811575,1.09181281873089,1.75323650300267,1.40510874733071,0.785267825952089,0.388844919875379,0.621339313086926,0,3.73791365109947,3.14371131868485,3.11121901350476,2.97067593998782,2.36538575687089,2.8165737274981,2.99470085141085,0.943734099831398,0.483168241652012,0,0,1.41907650703115,1.02710957164827,0.129920822977795,0.716106782669926,0.596044064343795,0.360586348559907,0,0.403865799792591,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0,1.15913756419314,0,0.549454872801795,0.214368379079066,0,14.1187960654267,18.8733346967943,17.1868654031819,13.4045482228076,16.4419804744954,11.3309084608455,14.8504950050997,13.0593148935024,14.9536994964788,15.5328093525546,1.24544817101012,4.78829848081237,4.43907374960749,3.40349403895612,2.72497111416377,3.8607136774503,4.4449345560323,3.5025959730612,4.1719497246936,2.52697211763797,4.81610669791456,3.9611531691076,3.183811253976,4.41773551593598,3.27382173046996,4.28664322154766,3.94006708212509,2.70072908649187,3.29668720642645,3.97437084362873,3.42869252385415,2.30718548007139,3.33810665926249,2.90692833264657,3.85848459702856,3.38458431566706,2.0122077016005,3.6829759601298,4.07412341537585,2.24456908663095,3.79632057997357,4.23569274214923,3.27384834535751,3.87342102964915,3.47231899766054,11.2414760072076,5.38042699424439,4.51229213501426,4.3996316375834,7.94129108830256,3.70988536992674
|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,4.83309602015838,3.11087838518853,1.39986421625363,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,0,7.28339259094552,7.93486468908049,10.1413024560989,1.35537812827653,0.889294796111139,0,0,0,14.9800055259202,14.2160772968975,3.00699875694585,3.64516033495565,2.94454945891935,28.2794474559766,22.5285911770646,3.67472397644862,3.83381884072945,5.51531271966013,18.7196997698961,21.7068474744819,26.2667171868176,10.1552441552249,9.69769022185542,5.2091337055676,16.7509799400829,14.6318278608237,19.8637722109853,26.8112012781038,22.2099822046601,9.13357284543973,5.37655972665607,21.2356083900067,0,0,0,0,0,0,0.702222100658759,0,0,0,24.5067550411424,0,0,0,0,0,0,0.45673551887624,0,0.593768556259299,2.77576522825817,3.34912026143355,2.53677046981664,3.3158980921577,3.05730638552832,0.251333182659351,0.247194967734374,0.578397427679647,0,3.72063754879041,1.54589062922275,0.969750506270444,1.86391761218122,8.49064311333487,14.0329293565015,0,0,0,0,24.7154555017957,15.0975198930147,12.3141265070607,14.0797699355744,16.8772201838018,22.0255327233134,18.6577452527921,2.24046600470696,1.11966273549084,0,1.47309299120532,2.60240885925407,2.5289231487682,1.62055916824814,3.31550599238573,3.53789795586905,3.71529788826064,4.12287588062807,6.72628763921441,4.52692785158969,3.21480336285293,6.33424046990216,3.94552318369635,4.17070873838397,6.61679116392116,4.52720700097476,2.38841120182192,0,0,0,1.86413195281952,1.17263029990548,0.540186184383045,1.65721314909647,0.983821158737019,1.07986979021165,0.930135779001631,0.268273401399619,1.28441876603886,0.658239399653922,0.656669856316381,0.891756905004413,0.584799949701329,0.219550115291051,0.402619256281115,10.3042074796422,9.98174740079059,0,0.793351699990633,1.06644125267617,1.62565670302307,1.41754207454303,0.80673409849337,0.889512175379481,2.09248188723815,0.949058123089023,1.31759163779209,1.75934646160189,0.994782360205754,1.55971269695296,0,0.864552199498777,0.597423819763102,1.13800740571849,1.48523066392647,2.25415471346161,1.01825663922657,2.13347735884388,1.96380295692892,2.02356918797623,0.590440591918409,0.470996183524124,0.370191491765402,0,0.500535317148282,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,1.51593129416388,2.11854469374634,1.18821560042632,0.704070744865506,0.837531287209079,0.952174563544055,0.975668239288994,0.630540576424764,1.32878813789265,1.11618338060241,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,21.8348802383397,18.6366581681603,0,0.504941854408746,10.0962630213202,20.3028147034252,26.7125013188671,43.2533524294119,41.4405533793253,43.876862272269,24.2886421004937,25.4262596382841,33.5994611254545,5.14114106274891,0.425820255624806,4.27357448801413,3.90928702448583,0.329940245945071,0,1.21390318077491,0.906970670894253,1.32023555829129,2.65771703592696,2.45948118355142,2.32585463851399,1.09060118843252,2.85197902707777,1.26414703174326,1.05418608574999,0,0,2.16073312837572,1.94038025674132,3.42939256050548,2.48276327099183,3.0322698992352,5.59466670047211,6.08929898229199,1.17335854031855,0.21183207086382,1.10264199027481,1.31909002353184,0.968786560175433,1.02531972377865,2.02932984805332,0.656563598980245,0,19.655082013114,0,1.65109494370578,0.370389054739423,0,0,0.228778173206523,0,0,0,0,3.79603192297362,2.43983360552218,1.51207477150522,1.67270636811575,1.09181281873089,1.75323650300267,1.40510874733071,0.785267825952089,0.388844919875379,0.621339313086926,0,3.73791365109947,3.14371131868485,3.11121901350476,2.97067593998782,2.36538575687089,2.8165737274981,2.99470085141085,0.943734099831398,0.483168241652012,0,0,1.41907650703115,1.02710957164827,0.129920822977795,0.716106782669926,0.596044064343795,0.360586348559907,0,0.403865799792591,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0,1.15913756419314,0,0.549454872801795,0.214368379079066,0,14.1187960654267,18.8733346967943,17.1868654031819,13.4045482228076,16.4419804744954,11.3309084608455,14.8504950050997,13.0593148935024,14.9536994964788,15.5328093525546,1.24544817101012,4.78829848081237,4.43907374960749,3.40349403895612,2.72497111416377,3.8607136774503,4.4449345560323,3.5025959730612,4.1719497246936,2.52697211763797,4.81610669791456,3.9611531691076,3.183811253976,4.41773551593598,3.27382173046996,4.28664322154766,3.94006708212509,2.70072908649187,3.29668720642645,3.97437084362873,3.42869252385415,2.30718548007139,3.33810665926249,2.90692833264657,3.85848459702856,3.38458431566706,2.0122077016005,3.6829759601298,4.07412341537585,2.24456908663095,3.79632057997357,4.23569274214923,3.27384834535751,3.87342102964915,3.47231899766054,11.2414760072076,5.38042699424439,4.51229213501426,4.3996316375834,7.94129108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|short_description=p1@Kcna6
}}
}}

Latest revision as of 17:29, 26 September 2015

Short description:p1@Kcna6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcna6_5end
Coexpression cluster:MCL_coexpression_mm9:1605
Association with transcript: 0bp_to_ENSMUST00000040751, NM_013568, uc009dvc.2, uc009dvd.2_5end
EntrezGene:Kcna6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcna6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C814.98
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F921.24
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I214.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.72
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F112.31
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F222.03
diencephalon, neonate N30.CNhs11201.1388-42B218.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C63.54
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E26.33
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G19.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C221.83
medulla oblongata, neonate N30.CNhs11200.1396-42A318.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.30
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D743.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D841.44
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D943.88
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.60
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C919.66
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.46e-3575
central nervous system9.49e-3473
ectoderm-derived structure3.86e-3195
ectoderm3.86e-3195
presumptive ectoderm3.86e-3195
neurectoderm3.93e-2464
neural plate3.93e-2464
presumptive neural plate3.93e-2464
regional part of nervous system3.20e-2254
ecto-epithelium8.78e-2273
neural tube9.59e-2152
neural rod9.59e-2152
future spinal cord9.59e-2152
neural keel9.59e-2152
gray matter2.07e-1734
pre-chordal neural plate3.73e-1749
brain4.81e-1747
future brain4.81e-1747
regional part of brain1.24e-1646
anterior neural tube5.69e-1640
structure with developmental contribution from neural crest2.32e-1592
regional part of forebrain2.93e-1539
forebrain2.93e-1539
future forebrain2.93e-1539
brain grey matter5.50e-1429
regional part of telencephalon5.50e-1429
telencephalon5.50e-1429
cerebral cortex9.68e-1021
cerebral hemisphere9.68e-1021
pallium9.68e-1021
regional part of cerebral cortex5.36e-0917
peripheral nervous system8.12e-0911
autonomic nervous system7.70e-089
occipital lobe5.33e-0710
visual cortex5.33e-0710
neocortex5.33e-0710
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