FFCP PHASE1:Mm9::chr6:113647068..113647153,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:113647068..113647153,+ to FFCP PHASE1:Mm9::chr6:113647068..113647153,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=381801 | |EntrezGene=381801 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1919 | |||
|TSSclassifier=NA | |||
|UniProt=F8VQE6 | |UniProt=F8VQE6 | ||
|association_with_transcript=24bp_to_ENSMUST00000089018_5end | |||
|cluster_id=chr6:113647068..113647153,+ | |||
|description=CAGE_peak_1_at_Tatdn2_5end | |||
|id=chr6:113647068..113647153,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.11e-10!32;CL:0002032!2.11e-10!32;CL:0000037!2.11e-10!32;CL:0000566!2.11e-10!32;CL:0000837!2.11e-10!32;CL:0000034!2.30e-08!97;CL:0000117!4.63e-08!23;CL:0000337!4.63e-08!23;CL:0002031!9.06e-08!25;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000838!5.43e-07!12;CL:0000542!6.54e-07!13;CL:0000051!6.54e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.10e-10,32;CL:0002032,2.10e-10,32;CL:0000037,2.10e-10,32;CL:0000837,2.10e-10,32;CL:0000034,2.29e-08,97;CL:0000117,4.63e-08,23;CL:0000337,4.63e-08,23;CL:0002031,9.02e-08,25;CL:0000791,2.25e-07,9;CL:0000789,2.25e-07,9;CL:0002420,2.25e-07,9;CL:0002419,2.25e-07,9;CL:0000790,2.25e-07,9;CL:0000838,5.43e-07,12;CL:0000542,6.54e-07,13;CL:0000051,6.54e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.31e-12!86;UBERON:0000153!3.59e-11!94;UBERON:0002020!3.08e-10!34;UBERON:0001049!6.36e-10!52;UBERON:0005068!6.36e-10!52;UBERON:0006241!6.36e-10!52;UBERON:0007135!6.36e-10!52;UBERON:0000955!1.80e-08!50;UBERON:0006238!1.80e-08!50;UBERON:0002791!3.77e-08!29;UBERON:0003528!3.77e-08!29;UBERON:0001893!3.77e-08!29;UBERON:0002616!4.02e-08!49;UBERON:0002780!6.06e-08!39;UBERON:0001890!6.06e-08!39;UBERON:0006240!6.06e-08!39;UBERON:0003080!6.35e-08!40;UBERON:0000033!7.59e-08!63;UBERON:0002390!9.58e-08!45;UBERON:0003061!9.58e-08!45;UBERON:0003056!7.14e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.08e-10,34;UBERON:0000073,4.76e-10,54;UBERON:0001049,6.36e-10,52;UBERON:0005068,6.36e-10,52;UBERON:0006241,6.36e-10,52;UBERON:0007135,6.36e-10,52;UBERON:0000955,3.34e-08,47;UBERON:0006238,3.34e-08,47;UBERON:0003528,3.77e-08,29;UBERON:0002791,3.77e-08,29;UBERON:0001893,3.77e-08,29;UBERON:0002780,6.06e-08,39;UBERON:0001890,6.06e-08,39;UBERON:0006240,6.06e-08,39;UBERON:0003080,6.35e-08,40;UBERON:0002616,7.49e-08,46;UBERON:0002390,9.58e-08,45;UBERON:0003061,9.58e-08,45;UBERON:0002346,4.11e-07,64;UBERON:0003075,4.11e-07,64;UBERON:0007284,4.11e-07,64;UBERON:0003056,7.14e-07,49;UBERON:0003081,7.24e-07,87;UBERON:0010314,7.60e-07,92 | |||
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| ||
|short_description=p1@Tatdn2 | |||
}} | }} |
Latest revision as of 11:40, 26 September 2015
Short description: | p1@Tatdn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tatdn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1919 |
Association with transcript: | 24bp_to_ENSMUST00000089018_5end |
EntrezGene: | Tatdn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.10e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.10e-10 | 32 |
hematopoietic stem cell | 2.10e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.10e-10 | 32 |
stem cell | 2.29e-08 | 97 |
CNS neuron (sensu Vertebrata) | 4.63e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.63e-08 | 23 |
hematopoietic lineage restricted progenitor cell | 9.02e-08 | 25 |
mature alpha-beta T cell | 2.25e-07 | 9 |
alpha-beta T cell | 2.25e-07 | 9 |
immature T cell | 2.25e-07 | 9 |
mature T cell | 2.25e-07 | 9 |
immature alpha-beta T cell | 2.25e-07 | 9 |
lymphoid lineage restricted progenitor cell | 5.43e-07 | 12 |
lymphocyte | 6.54e-07 | 13 |
common lymphoid progenitor | 6.54e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.08e-10 | 34 |
regional part of nervous system | 4.76e-10 | 54 |
neural tube | 6.36e-10 | 52 |
neural rod | 6.36e-10 | 52 |
future spinal cord | 6.36e-10 | 52 |
neural keel | 6.36e-10 | 52 |
brain | 3.34e-08 | 47 |
future brain | 3.34e-08 | 47 |
brain grey matter | 3.77e-08 | 29 |
regional part of telencephalon | 3.77e-08 | 29 |
telencephalon | 3.77e-08 | 29 |
regional part of forebrain | 6.06e-08 | 39 |
forebrain | 6.06e-08 | 39 |
future forebrain | 6.06e-08 | 39 |
anterior neural tube | 6.35e-08 | 40 |
regional part of brain | 7.49e-08 | 46 |
hematopoietic system | 9.58e-08 | 45 |
blood island | 9.58e-08 | 45 |
neurectoderm | 4.11e-07 | 64 |
neural plate | 4.11e-07 | 64 |
presumptive neural plate | 4.11e-07 | 64 |
pre-chordal neural plate | 7.14e-07 | 49 |
lateral plate mesoderm | 7.24e-07 | 87 |
structure with developmental contribution from neural crest | 7.60e-07 | 92 |