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FFCP PHASE1:Mm9::chr6:103460633..103460654,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:103460633..103460654,+
|DHSsupport=NA
|short_description=p6@Chl1
|DPIdataset=NA
|description=CAGE_peak_6_at_Chl1_5end
|association_with_transcript=-215bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|EntrezGene=12661
|EntrezGene=12661
|HGNC=
|HGNC=
|MCL_coexpression_id=905
|TSSclassifier=NA
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|association_with_transcript=-215bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|cluster_id=chr6:103460633..103460654,+
|description=CAGE_peak_6_at_Chl1_5end
|id=chr6:103460633..103460654,+
|ontology_enrichment_celltype=CL:0000540!2.26e-18!33;CL:0000047!2.26e-18!33;CL:0000031!2.26e-18!33;CL:0000404!2.26e-18!33;CL:0000221!4.25e-15!44;CL:0000133!4.25e-15!44;CL:0002319!1.01e-14!43;CL:0000393!4.62e-13!39;CL:0000211!4.62e-13!39;CL:0000117!7.30e-12!23;CL:0000337!7.30e-12!23;CL:0000055!2.80e-10!50;CL:0000107!7.21e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,4.18e-23,33;CL:0000047,4.18e-23,33;CL:0000031,4.18e-23,33;CL:0000404,4.18e-23,33;CL:0000221,9.18e-19,44;CL:0000133,9.18e-19,44;CL:0002319,2.93e-18,43;CL:0000393,1.58e-17,39;CL:0000211,1.58e-17,39;CL:0000117,2.00e-15,23;CL:0000337,2.00e-15,23;CL:0000107,4.70e-10,9;CL:0002321,4.16e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.26e-21!75;UBERON:0001016!2.26e-21!75;UBERON:0001017!2.04e-20!73;UBERON:0005743!2.04e-20!73;UBERON:0004121!3.61e-20!102;UBERON:0000924!3.61e-20!102;UBERON:0006601!3.61e-20!102;UBERON:0002346!1.25e-13!71;UBERON:0003075!1.25e-13!71;UBERON:0007284!1.25e-13!71;UBERON:0002020!1.53e-13!34;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0000033!9.22e-11!63;UBERON:0002791!1.68e-10!29;UBERON:0003528!1.68e-10!29;UBERON:0001893!1.68e-10!29;UBERON:0000955!2.13e-10!50;UBERON:0006238!2.13e-10!50;UBERON:0002616!2.75e-10!49;UBERON:0003080!1.36e-09!40;UBERON:0002780!2.57e-09!39;UBERON:0001890!2.57e-09!39;UBERON:0006240!2.57e-09!39;UBERON:0003056!4.43e-09!49;UBERON:0000010!1.42e-08!11;UBERON:0000468!4.64e-08!333;UBERON:0002410!7.21e-08!9;UBERON:0000956!4.44e-07!21;UBERON:0001869!4.44e-07!21;UBERON:0000203!4.44e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.02e-23,75;UBERON:0001017,3.30e-22,73;UBERON:0004121,2.63e-18,95;UBERON:0000924,2.63e-18,95;UBERON:0006601,2.63e-18,95;UBERON:0002020,3.68e-17,34;UBERON:0000073,3.41e-15,54;UBERON:0001049,1.68e-14,52;UBERON:0005068,1.68e-14,52;UBERON:0006241,1.68e-14,52;UBERON:0007135,1.68e-14,52;UBERON:0002346,2.46e-14,64;UBERON:0003075,2.46e-14,64;UBERON:0007284,2.46e-14,64;UBERON:0003528,4.18e-13,29;UBERON:0002791,4.18e-13,29;UBERON:0001893,4.18e-13,29;UBERON:0010371,4.19e-12,73;UBERON:0000010,5.28e-11,11;UBERON:0002616,1.48e-10,46;UBERON:0003080,3.99e-10,40;UBERON:0000955,4.17e-10,47;UBERON:0006238,4.17e-10,47;UBERON:0002410,4.70e-10,9;UBERON:0002780,9.06e-10,39;UBERON:0001890,9.06e-10,39;UBERON:0006240,9.06e-10,39;UBERON:0000956,1.50e-08,21;UBERON:0001869,1.50e-08,21;UBERON:0000203,1.50e-08,21;UBERON:0003056,3.98e-08,49;UBERON:0010314,3.32e-07,92
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94429899074283,0.419959264876088,0,0,0,0,0.257259436035947,0,0,6.47412674750713,6.34789175126439,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,4.04389488003063,3.24014251996058,3.15487442027073,4.85606673486466,4.41737081903227,3.91970557487853,2.20444583341944,2.75765635983006,2.20231761998777,1.40456071893706,3.07213066512487,9.49581271657396,10.9785172322892,13.5437476344758,1.95428099300967,2.25105044012672,2.44477196442896,16.2045722010517,18.9354335462807,11.183966749518,1.4387976733305,14.5097395405028,0,0,0,0,0,0,0.280888840263504,0,0,0,2.95771181531029,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.890652834388949,0,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.251333182659351,0,0.289198713839823,0,0.647067399789637,0,0.484875253135222,0,2.34224637609238,1.67557365450764,0,0,0,0,2.24685959107234,1.83000241127451,9.42407640846483,2.08589184230732,3.06858548796397,2.0778804455956,2.59586020908412,0,0.248813941220186,0,0.841767423545896,0,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,1.0249097622788,1.03071897015702,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,1.4404749548556,0,0,0,0,0,0.469052119962192,0,0,0,0.308534225774757,0,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0.292399974850665,0.658650345873152,0.671032093801859,6.72927835405207,20.6838270882362,0.330418782983798,0,1.06644125267617,1.39342003116263,1.28867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.988193728344065,0.754005626400808,1.1937388322469,1.75467678407208,2.69645822596266,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0.327726629431476,0.518054945597687,0,0,0,0,0,2.0871576698413,2.34423373184406,0,1.00988370881749,11.3582958989852,9.76096860741596,17.4492952163567,39.4298516621711,42.3317480756549,37.9322551257035,14.5731852602962,21.6269334854371,20.1596766752727,0.963963949265421,0.283880170416537,0.178065603667255,0.651547837414304,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,0.36012218806262,0.258717367565509,0.428674070063185,1.06404140185364,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0.882113592219848,0.49465875882444,0.807322133479528,0.965006798850494,1.07435109602823,0.656563598980245,0.874442509889552,2.96680483216816,0.170870880797853,0,0,0,0,0,0,0,0,0,1.89801596148681,1.82987520414164,1.08005340821801,3.13632444021703,2.40198820120795,1.07891477107857,1.57041565878138,0.523511883968059,0.518459893167171,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0.389762468933385,0,0,0.841368146639782,0.147689527174577,0.504832249740738,0.15241361331,0.504130925684203,0.38983152295901,0.769694733122636,0.467507608726276,1.81384306892169,0,0,0,0.579568782096571,0,0.36630324853453,0.214368379079066,0,5.0827665835536,3.22227665555024,2.29158205375759,3.09335728218638,1.37016503954128,3.0215755895588,1.35004500046361,1.35096360967266,0.906284817968409,1.55328093525546,1.14166082342594,2.39414924040619,2.73173769206615,3.8897074730927,2.93458427679175,3.30918315210025,4.66718128383392,3.91466608753899,5.77654577265267,2.02157769411038,3.04175159868288,5.65879024158229,3.65201879132541,4.54578582074572,4.53740204749345,4.28664322154766,5.67833197129792,3.8581844092741,2.88460130562315,3.67997300335993,4.80016953339582,3.90446773550542,2.62279808942053,6.39524233182245,3.95259397744389,4.56918882615053,4.75612729469209,3.94604567156764,4.07412341537585,6.73370725989286,4.62676570684279,3.74317033027141,3.27384834535751,4.80304207676495,3.47231899766054,7.49431733813838,3.04111090979031,3.22306581072447,2.48674831689496,0.882365676478062,1.15933917810211
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94429899074283,0.419959264876088,0,0,0,0,0.257259436035947,0,0,6.47412674750713,6.34789175126439,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,4.04389488003063,3.24014251996058,3.15487442027073,4.85606673486466,4.41737081903227,3.91970557487853,2.20444583341944,2.75765635983006,2.20231761998777,1.40456071893706,3.07213066512487,9.49581271657396,10.9785172322892,13.5437476344758,1.95428099300967,2.25105044012672,2.44477196442896,16.2045722010517,18.9354335462807,11.183966749518,1.4387976733305,14.5097395405028,0,0,0,0,0,0,0.280888840263504,0,0,0,2.95771181531029,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.890652834388949,0,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.251333182659351,0,0.289198713839823,0,0.647067399789637,0,0.484875253135222,0,2.34224637609238,1.67557365450764,0,0,0,0,2.24685959107234,1.83000241127451,9.42407640846483,2.08589184230732,3.06858548796397,2.0778804455956,2.59586020908412,0,0.248813941220186,0,0.841767423545896,0,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,1.0249097622788,1.03071897015702,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,1.4404749548556,0,0,0,0,0,0.469052119962192,0,0,0,0.308534225774757,0,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0.292399974850665,0.658650345873152,0.671032093801859,6.72927835405207,20.6838270882362,0.330418782983798,0,1.06644125267617,1.39342003116263,1.28867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.988193728344065,0.754005626400808,1.1937388322469,1.75467678407208,2.69645822596266,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0.327726629431476,0.518054945597687,0,0,0,0,0,2.0871576698413,2.34423373184406,0,1.00988370881749,11.3582958989852,9.76096860741596,17.4492952163567,39.4298516621711,42.3317480756549,37.9322551257035,14.5731852602962,21.6269334854371,20.1596766752727,0.963963949265421,0.283880170416537,0.178065603667255,0.651547837414304,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,0.36012218806262,0.258717367565509,0.428674070063185,1.06404140185364,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0.882113592219848,0.49465875882444,0.807322133479528,0.965006798850494,1.07435109602823,0.656563598980245,0.874442509889552,2.96680483216816,0.170870880797853,0,0,0,0,0,0,0,0,0,1.89801596148681,1.82987520414164,1.08005340821801,3.13632444021703,2.40198820120795,1.07891477107857,1.57041565878138,0.523511883968059,0.518459893167171,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0.389762468933385,0,0,0.841368146639782,0.147689527174577,0.504832249740738,0.15241361331,0.504130925684203,0.38983152295901,0.769694733122636,0.467507608726276,1.81384306892169,0,0,0,0.579568782096571,0,0.36630324853453,0.214368379079066,0,5.0827665835536,3.22227665555024,2.29158205375759,3.09335728218638,1.37016503954128,3.0215755895588,1.35004500046361,1.35096360967266,0.906284817968409,1.55328093525546,1.14166082342594,2.39414924040619,2.73173769206615,3.8897074730927,2.93458427679175,3.30918315210025,4.66718128383392,3.91466608753899,5.77654577265267,2.02157769411038,3.04175159868288,5.65879024158229,3.65201879132541,4.54578582074572,4.53740204749345,4.28664322154766,5.67833197129792,3.8581844092741,2.88460130562315,3.67997300335993,4.80016953339582,3.90446773550542,2.62279808942053,6.39524233182245,3.95259397744389,4.56918882615053,4.75612729469209,3.94604567156764,4.07412341537585,6.73370725989286,4.62676570684279,3.74317033027141,3.27384834535751,4.80304207676495,3.47231899766054,7.49431733813838,3.04111090979031,3.22306581072447,2.48674831689496,0.882365676478062,1.15933917810211
|short_description=p6@Chl1
}}
}}

Latest revision as of 10:26, 26 September 2015

Short description:p6@Chl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Chl1_5end
Coexpression cluster:MCL_coexpression_mm9:905
Association with transcript: -215bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end
EntrezGene:Chl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Chl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.18
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F914.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G120.68
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D739.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D842.33
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D937.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.16
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.02e-2375
central nervous system3.30e-2273
ectoderm-derived structure2.63e-1895
ectoderm2.63e-1895
presumptive ectoderm2.63e-1895
gray matter3.68e-1734
regional part of nervous system3.41e-1554
neural tube1.68e-1452
neural rod1.68e-1452
future spinal cord1.68e-1452
neural keel1.68e-1452
neurectoderm2.46e-1464
neural plate2.46e-1464
presumptive neural plate2.46e-1464
brain grey matter4.18e-1329
regional part of telencephalon4.18e-1329
telencephalon4.18e-1329
ecto-epithelium4.19e-1273
peripheral nervous system5.28e-1111
regional part of brain1.48e-1046
anterior neural tube3.99e-1040
brain4.17e-1047
future brain4.17e-1047
autonomic nervous system4.70e-109
regional part of forebrain9.06e-1039
forebrain9.06e-1039
future forebrain9.06e-1039
cerebral cortex1.50e-0821
cerebral hemisphere1.50e-0821
pallium1.50e-0821
pre-chordal neural plate3.98e-0849
structure with developmental contribution from neural crest3.32e-0792
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