FFCP PHASE1:Mm9::chr5:64041548..64041555,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:64041548..64041555,- to FFCP PHASE1:Mm9::chr5:64041548..64041555,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=F6TRM0 | |UniProt=F6TRM0 | ||
|association_with_transcript=-45bp_to_ENSMUST00000067917_5end | |||
|cluster_id=chr5:64041548..64041555,- | |||
|description=CAGE_peak_1_at_ENSMUST00000067917_5end | |||
|id=chr5:64041548..64041555,- | |||
|ontology_enrichment_celltype=CL:0000117!1.05e-14!23;CL:0000337!1.05e-14!23;CL:0002613!5.72e-11!3;CL:0002610!1.47e-10!3;CL:0000540!1.38e-09!33;CL:0000047!1.38e-09!33;CL:0000031!1.38e-09!33;CL:0000404!1.38e-09!33;CL:0000393!8.76e-08!39;CL:0000211!8.76e-08!39;CL:0002319!7.28e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.33e-65,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!1.47e-10!3;UBERON:0002275!1.47e-10!3;UBERON:0001017!3.35e-10!73;UBERON:0005743!3.35e-10!73;UBERON:0002616!7.22e-10!49;UBERON:0000073!7.92e-10!75;UBERON:0001016!7.92e-10!75;UBERON:0000955!1.30e-09!50;UBERON:0006238!1.30e-09!50;UBERON:0001049!7.88e-09!52;UBERON:0005068!7.88e-09!52;UBERON:0006241!7.88e-09!52;UBERON:0007135!7.88e-09!52;UBERON:0000033!3.82e-08!63;UBERON:0002020!1.93e-07!34;UBERON:0004121!4.35e-07!102;UBERON:0000924!4.35e-07!102;UBERON:0006601!4.35e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.27e-40,5;UBERON:0002435,7.27e-40,5;UBERON:0000204,7.27e-40,5;UBERON:0010082,7.27e-40,5;UBERON:0002420,2.39e-25,8;UBERON:0007245,2.39e-25,8;UBERON:0010009,2.39e-25,8;UBERON:0010011,2.39e-25,8;UBERON:0000454,2.39e-25,8;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,3.42904348098504,4.20843160571084,4.68822033501084,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83115217823824,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,3.42904348098504,4.20843160571084,4.68822033501084,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83115217823824,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000067917 | |||
}} | }} |
Latest revision as of 02:52, 26 September 2015
Short description: | p1@ENSMUST00000067917 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000067917_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -45bp_to_ENSMUST00000067917_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.33e-65 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.27e-40 | 5 |
striatum | 7.27e-40 | 5 |
ventral part of telencephalon | 7.27e-40 | 5 |
future corpus striatum | 7.27e-40 | 5 |
basal ganglion | 2.39e-25 | 8 |
nuclear complex of neuraxis | 2.39e-25 | 8 |
aggregate regional part of brain | 2.39e-25 | 8 |
collection of basal ganglia | 2.39e-25 | 8 |
cerebral subcortex | 2.39e-25 | 8 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
brain grey matter | 1.15e-07 | 29 |
regional part of telencephalon | 1.15e-07 | 29 |
telencephalon | 1.15e-07 | 29 |
regional part of nervous system | 2.91e-07 | 54 |