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FFCP PHASE1:Mm9::chr5:23929334..23929356,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:23929334..23929356,-
|DHSsupport=NA
|short_description=p2@Cdk5
|DPIdataset=NA
|description=CAGE_peak_2_at_Cdk5_5end
|association_with_transcript=0bp_to_ENSMUST00000030814,NM_007668,uc008wrl.1_5end
|EntrezGene=12568
|EntrezGene=12568
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P49615,Q543F6
|UniProt=P49615,Q543F6
|association_with_transcript=0bp_to_ENSMUST00000030814,NM_007668,uc008wrl.1_5end
|cluster_id=chr5:23929334..23929356,-
|description=CAGE_peak_2_at_Cdk5_5end
|id=chr5:23929334..23929356,-
|ontology_enrichment_celltype=CL:0000221!1.37e-17!44;CL:0000133!1.37e-17!44;CL:0002319!3.24e-17!43;CL:0000055!8.55e-16!50;CL:0000540!2.52e-14!33;CL:0000047!2.52e-14!33;CL:0000031!2.52e-14!33;CL:0000404!2.52e-14!33;CL:0000393!6.91e-14!39;CL:0000211!6.91e-14!39;CL:0000117!2.73e-12!23;CL:0000337!2.73e-12!23
|ontology_enrichment_celltype_v019_2=CL:0000221,1.36e-17,44;CL:0000133,1.36e-17,44;CL:0002319,3.24e-17,43;CL:0000540,2.52e-14,33;CL:0000047,2.52e-14,33;CL:0000031,2.52e-14,33;CL:0000404,2.52e-14,33;CL:0000393,6.91e-14,39;CL:0000211,6.91e-14,39;CL:0000117,2.73e-12,23;CL:0000337,2.73e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.53e-34!75;UBERON:0001016!1.53e-34!75;UBERON:0001017!2.12e-34!73;UBERON:0005743!2.12e-34!73;UBERON:0001049!1.55e-25!52;UBERON:0005068!1.55e-25!52;UBERON:0006241!1.55e-25!52;UBERON:0007135!1.55e-25!52;UBERON:0004121!2.35e-25!102;UBERON:0000924!2.35e-25!102;UBERON:0006601!2.35e-25!102;UBERON:0000955!5.69e-24!50;UBERON:0006238!5.69e-24!50;UBERON:0002346!8.95e-24!71;UBERON:0003075!8.95e-24!71;UBERON:0007284!8.95e-24!71;UBERON:0002616!1.61e-23!49;UBERON:0000033!5.68e-22!63;UBERON:0003080!1.22e-18!40;UBERON:0002780!5.01e-18!39;UBERON:0001890!5.01e-18!39;UBERON:0006240!5.01e-18!39;UBERON:0002020!6.29e-18!34;UBERON:0003056!1.02e-17!49;UBERON:0002791!7.06e-15!29;UBERON:0003528!7.06e-15!29;UBERON:0001893!7.06e-15!29;UBERON:0000153!1.48e-13!94;UBERON:0007811!2.09e-12!86;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002619!3.10e-09!17;UBERON:0003076!1.87e-07!12;UBERON:0003057!1.87e-07!12;UBERON:0002021!8.65e-07!10;UBERON:0000411!8.65e-07!10;UBERON:0001950!8.65e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.53e-34,75;UBERON:0001017,2.12e-34,73;UBERON:0000073,7.74e-27,54;UBERON:0004121,2.21e-26,95;UBERON:0000924,2.21e-26,95;UBERON:0006601,2.21e-26,95;UBERON:0002346,1.51e-25,64;UBERON:0003075,1.51e-25,64;UBERON:0007284,1.51e-25,64;UBERON:0001049,1.55e-25,52;UBERON:0005068,1.55e-25,52;UBERON:0006241,1.55e-25,52;UBERON:0007135,1.55e-25,52;UBERON:0000955,5.67e-22,47;UBERON:0006238,5.67e-22,47;UBERON:0002616,1.57e-21,46;UBERON:0010371,4.39e-20,73;UBERON:0003080,1.22e-18,40;UBERON:0002780,5.01e-18,39;UBERON:0001890,5.01e-18,39;UBERON:0006240,5.01e-18,39;UBERON:0002020,6.28e-18,34;UBERON:0003056,1.02e-17,49;UBERON:0010314,1.88e-16,92;UBERON:0003528,7.05e-15,29;UBERON:0002791,7.05e-15,29;UBERON:0001893,7.05e-15,29;UBERON:0000956,1.54e-10,21;UBERON:0001869,1.54e-10,21;UBERON:0000203,1.54e-10,21;UBERON:0002619,3.10e-09,17;UBERON:0003076,1.87e-07,12;UBERON:0003057,1.87e-07,12;UBERON:0002021,8.65e-07,10;UBERON:0000411,8.65e-07,10;UBERON:0001950,8.65e-07,10
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622,5.52943820177765,5.86839535649885,7.85267825952089,3.88844919875379,5.59205381778233,27.0572610568411,14.353588420222,16.876766026624,16.5283510092441,15.7574984642832,20.7816034353657,20.7722312402985,30.2074172837964,41.9437377702843,33.0970245531628,24.4825505319186,7.90027801570446,8.71718425747706,9.34669710199928,6.49604114888975,9.13036147904155,10.1327490938445,7.81270421879797,7.97523446742717,8.27924889574811,6.32516495236499,9.37683521772617,9.35595655101623,7.69694733122636,12.0383209247016,4.30787728868902,4.88369097422942,4.39597897386431,9.23365390002431,6.76163579112667,8.25802891985201,6.41030684935428,6.64541975145104,4.01257683228291,34.4498623996411,36.365693684067,32.0821487526062,27.6683623573337,33.5690434687615,19.6402413321322,29.7009900101995,24.3173449741079,23.5634052671786,24.3347346523355,12.1431196673487,19.1531939232495,16.2196925466427,11.6691224192781,7.33646069197938,10.4790799816508,6.88964856185007,5.76898160268904,10.2694147069381,9.8551912587881,9.37873409593887,10.1858224348481,11.143339388916,10.8202507564229,11.6019647290339,12.859929664643,7.99601849019503,8.87382414133043,8.65380391686944,10.009526569139,7.20025430009372,11.3584515941976,8.34526664815623,8.86613141457204,9.97559432402504,8.79991922073436,9.51225458938417,8.41823076601097,8.69146328613515,11.7839877048125,10.202611558679,8.27437651954733,8.18462086339379,9.76102099471586,10.2240503820005,12.4905288968973,9.35726433781634,7.95022899978704,7.07766828654721,7.94129108830256,8.81097775357602
|phase1_expression=12.8119077683835,1.04692622291808,5.0049916332849,3.93203474698879,5.50985302940982,3.02182689441402,4.43864017131499,4.9066862907799,1.12630977721333,1.87251621057595,0.513653904676515,0.558405112967355,4.79362043807376,4.54586092578786,2.33176833270964,3.23960427823721,0.699561878128147,5.36285681109004,3.29074640653773,2.54633791078818,15.9881385484011,10.5248408272938,9.66439219814061,7.03966660290989,3.21172993494038,2.29692785646008,3.87685796543167,5.38678081714723,4.18051522804023,3.52842181663903,4.21287970245079,4.44521471421742,9.22597181376855,0,3.46621943701529,3.15845826181135,3.67504841272264,7.53356935326434,7.813353445238,7.32933241563318,4.70585190424811,6.14740936462601,11.1667381197165,9.4422613481683,10.5432008468295,15.6014739337429,13.3006528539167,19.4042389178597,15.5977189741475,18.4708404120569,13.1587236327841,15.8127820801469,3.52343472721246,8.70434570413613,6.72187598284928,8.2323019531503,8.88253663810146,9.7977697532714,20.8385954685386,23.2756030879694,22.8179305262225,15.5868484751801,15.1180115338894,12.5985960419396,4.94433181283487,7.104801149461,20.6724076257699,27.6637179831519,14.2054768862614,14.9856591548177,17.8776217148675,45.4185065202048,39.977205912242,14.4539143073646,19.456630616702,23.8996884518605,28.6301290598411,36.2632040161933,33.1790111833486,21.4974649000216,26.4399290010964,20.3156214517136,37.4105218661851,33.2029939918691,30.4068513075852,24.4541725943144,27.4777343942269,24.6047268489397,8.5570598466498,15.870027622425,4.92769630792852,2.58127163094416,4.75979933595425,3.77792234146472,5.19821133958135,4.03224198387602,7.72444310724635,11.930122580464,14.8078022623635,11.3068663843309,16.1969932743183,3.84979432242953,0,0,6.27824018932521,4.81383744402687,11.62706223534,6.96521666286266,5.69663344023778,6.53145411885229,8.67426633830679,9.43842982767638,9.68585088475446,10.0984169170257,7.76085467095652,6.91166252313215,7.66304399976559,4.916378135277,7.07688441559899,7.117741397686,3.97514733228708,5.81850303762267,0,15.2246014446005,22.8296910426666,4.59822699375465,4.55297473122497,6.59893004092748,4.82866862877646,30.5572904385838,32.9400434029411,21.6125485634127,33.0266208365325,39.1244649715406,38.0252121543995,44.1296235544301,10.9986512958342,4.97627882440372,10.108910337347,4.41927897361595,14.053007839972,20.0014830857121,10.803727788321,14.9197769657358,9.72921937863988,10.6334387836425,9.18276900685342,6.72628763921441,12.5029435901048,15.695804653929,14.9558455539357,15.1245055375027,12.2340789659263,11.1440693287093,9.67176041117334,17.1169469463904,4.91549231119264,5.66165395652373,5.39910648851626,6.83515049367156,7.03578179943289,5.94204802821349,8.52281048106757,7.28027657465394,6.78775296704464,7.67362017676346,5.633741429392,4.78737903705395,5.10135534731789,7.38753588355929,5.02626619184305,3.80119967305864,3.95190207523891,5.77087600669599,32.3846520788756,15.5385964692719,5.94753809370836,3.96675849995316,15.3567540385368,13.9342003116263,8.24751752461397,8.67239155880373,5.78182913996663,8.3699275489526,5.21981967698963,4.77626968699632,8.04272668160862,6.36660710531683,5.06906626509712,2.69645822596266,8.42938394511308,4.18196673834171,13.0870851657626,10.0538691096561,6.76246414038483,10.1825663922657,10.6673867942194,7.64480436804472,6.70307293517127,5.46157547524528,7.37894020854462,8.76119863844784,6.22550516883013,4.67166296005063,5.50365186316968,4.04751802292737,2.02860121388503,3.61765739628625,3.8193877767213,4.02774592431135,3.08056930872567,2.47105271869273,5.75072826109418,2.97712758134803,3.43241440426017,4.2938409251009,2.87035861635059,5.78932225636041,5.35784251483154,15.9172785887207,10.7556884451737,8.48725428875941,8.91822943496308,9.04533790185805,6.42717830392237,4.48807390072937,6.77831119656621,7.0868700687608,7.97273843287435,5.07976275618788,5.00786447411097,5.35201516751593,4.52373851817817,4.35124547054968,0.983528546038072,4.41498794087572,42.2248051667893,58.4886316095094,11.639381121744,3.7870639080656,15.1443945319803,14.8366722832723,15.5104846367615,16.010909462821,14.2591151412732,13.587673477864,17.0020494703456,14.6127928955656,10.6727700045561,18.6366363524648,10.5035663054119,21.3678724400706,10.750539317336,9.89820737835213,2.65490276679926,9.95400608235424,8.76738315197778,6.41257271170054,5.90603785761546,7.37844355065426,4.9101375701962,3.99887102425256,4.9909632973861,4.42451461110142,7.37930260024991,3.09406629744561,10.2131881726136,15.4852540866927,17.9808570458029,16.289614662401,14.3645589250242,14.2695054081656,14.4803138129866,14.9187825066154,7.27482294997502,14.6164128896036,4.41056796109924,4.61681508236144,5.00539722757307,5.36785031860587,4.41677672811605,4.59594519286172,4.95517422270746,41.5352676503542,3.07567585436135,9.49379592630823,5.92622487583077,2.0720530270516,2.87057878214153,2.0590035588587,3.90950388985867,5.318155188299,4.00779924032829,5.72802370809068,15.0259596951039,9.96265388921559,9.93649135560572,7.94535524854981,7.64268973111622,5.52943820177765,5.86839535649885,7.85267825952089,3.88844919875379,5.59205381778233,27.0572610568411,14.353588420222,16.876766026624,16.5283510092441,15.7574984642832,20.7816034353657,20.7722312402985,30.2074172837964,41.9437377702843,33.0970245531628,24.4825505319186,7.90027801570446,8.71718425747706,9.34669710199928,6.49604114888975,9.13036147904155,10.1327490938445,7.81270421879797,7.97523446742717,8.27924889574811,6.32516495236499,9.37683521772617,9.35595655101623,7.69694733122636,12.0383209247016,4.30787728868902,4.88369097422942,4.39597897386431,9.23365390002431,6.76163579112667,8.25802891985201,6.41030684935428,6.64541975145104,4.01257683228291,34.4498623996411,36.365693684067,32.0821487526062,27.6683623573337,33.5690434687615,19.6402413321322,29.7009900101995,24.3173449741079,23.5634052671786,24.3347346523355,12.1431196673487,19.1531939232495,16.2196925466427,11.6691224192781,7.33646069197938,10.4790799816508,6.88964856185007,5.76898160268904,10.2694147069381,9.8551912587881,9.37873409593887,10.1858224348481,11.143339388916,10.8202507564229,11.6019647290339,12.859929664643,7.99601849019503,8.87382414133043,8.65380391686944,10.009526569139,7.20025430009372,11.3584515941976,8.34526664815623,8.86613141457204,9.97559432402504,8.79991922073436,9.51225458938417,8.41823076601097,8.69146328613515,11.7839877048125,10.202611558679,8.27437651954733,8.18462086339379,9.76102099471586,10.2240503820005,12.4905288968973,9.35726433781634,7.95022899978704,7.07766828654721,7.94129108830256,8.81097775357602
|short_description=p2@Cdk5
}}
}}

Latest revision as of 20:34, 25 September 2015

Short description:p2@Cdk5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdk5_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000030814, NM_007668, uc008wrl.1_5end
EntrezGene:Cdk5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cdk5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.54
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.60
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C320.84
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C820.67
Mouse Microglia, donor2.CNhs12634.11736-123E827.66
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D733.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.60
Mouse Schwann, donor1.CNhs12507.11728-123D98.56
Mouse Schwann, donor2.CNhs12573.11746-123F915.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I19.69
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I222.83
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A430.56
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F121.61
cortex, adult.CNhs10473.12-14D533.03
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F238.03
diencephalon, neonate N30.CNhs11201.1388-42B244.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C614.05
eyeball, embryo E14.CNhs10521.399-16E220.00
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D414.92
eyeball, neonate N00.CNhs11207.633-15C69.73
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G89.18
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E212.50
forelimb, embryo E12.CNhs10600.359-14H215.70
forelimb, embryo E13.CNhs10589.384-1E214.96
forelimb, embryo E14.CNhs10577.413-26A815.12
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I617.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G15.03
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E832.38
hippocampus, neonate N00.CNhs11228.627-43G115.54
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I515.36
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D88.25
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F810.05
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C710.67
kidney, neonate N00.CNhs11214.646-21G77.64
kidney, neonate N10.CNhs11206.758-6D56.70
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H18.76
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F810.76
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A69.05
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C242.22
medulla oblongata, neonate N30.CNhs11200.1396-42A358.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H721.37
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F49.95
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E615.49
pituitary gland, embryo E13.CNhs11009.370-44C717.98
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B914.36
pituitary gland, embryo E16.CNhs11036.449-43F614.27
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G314.62
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H35.37
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C941.54
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E315.03
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D49.94
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G527.06
testis, embryo E13.CNhs11031.389-23F514.35
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I515.76
testis, embryo E18.CNhs11027.503-18G520.78
testis, neonate N00.CNhs11189.1300-22B720.77
testis, neonate N07.CNhs11222.726-26I430.21
testis, neonate N10.CNhs11204.763-44D941.94
testis, neonate N20.CNhs11110.839-18H333.10
testis, neonate N30.CNhs11130.1391-42E224.48
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I29.35
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C77.98
thymus, neonate N06.CNhs11197.681-26C48.28
thymus, neonate N07.CNhs11211.713-19D36.33
thymus, neonate N10.CNhs11194.748-24E49.38
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G77.70
thymus, neonate N30.CNhs11132.1393-42G212.04
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I812.14
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H216.22
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F210.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.36e-1744
neurectodermal cell1.36e-1744
neural cell3.24e-1743
neuron2.52e-1433
neuronal stem cell2.52e-1433
neuroblast2.52e-1433
electrically signaling cell2.52e-1433
electrically responsive cell6.91e-1439
electrically active cell6.91e-1439
CNS neuron (sensu Vertebrata)2.73e-1223
neuroblast (sensu Vertebrata)2.73e-1223

Uber anatomy
Ontology termp-valuen
nervous system1.53e-3475
central nervous system2.12e-3473
regional part of nervous system7.74e-2754
ectoderm-derived structure2.21e-2695
ectoderm2.21e-2695
presumptive ectoderm2.21e-2695
neurectoderm1.51e-2564
neural plate1.51e-2564
presumptive neural plate1.51e-2564
neural tube1.55e-2552
neural rod1.55e-2552
future spinal cord1.55e-2552
neural keel1.55e-2552
brain5.67e-2247
future brain5.67e-2247
regional part of brain1.57e-2146
ecto-epithelium4.39e-2073
anterior neural tube1.22e-1840
regional part of forebrain5.01e-1839
forebrain5.01e-1839
future forebrain5.01e-1839
gray matter6.28e-1834
pre-chordal neural plate1.02e-1749
structure with developmental contribution from neural crest1.88e-1692
brain grey matter7.05e-1529
regional part of telencephalon7.05e-1529
telencephalon7.05e-1529
cerebral cortex1.54e-1021
cerebral hemisphere1.54e-1021
pallium1.54e-1021
regional part of cerebral cortex3.10e-0917
posterior neural tube1.87e-0712
chordal neural plate1.87e-0712
occipital lobe8.65e-0710
visual cortex8.65e-0710
neocortex8.65e-0710
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