FFCP PHASE1:Mm9::chr5:137791390..137791405,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:137791390..137791405,+ to FFCP PHASE1:Mm9::chr5:137791390..137791405,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13846 | |EntrezGene=13846 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1813 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C8K1 | |UniProt=Q8C8K1 | ||
|association_with_transcript=0bp_to_ENSMUST00000111055_5end | |||
|cluster_id=chr5:137791390..137791405,+ | |||
|description=CAGE_peak_3_at_Ephb4_5end | |||
|id=chr5:137791390..137791405,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.17e-09!14;UBERON:0000117!3.17e-09!14;UBERON:0000171!3.17e-09!14;UBERON:0000170!3.17e-09!14;UBERON:0005597!3.17e-09!14;UBERON:0000118!3.17e-09!14;UBERON:0009569!7.05e-09!66;UBERON:0005177!7.63e-09!85;UBERON:0005153!3.55e-08!17;UBERON:0005178!1.06e-07!17;UBERON:0005181!1.06e-07!17;UBERON:0002224!1.06e-07!17;UBERON:0000915!1.06e-07!17;UBERON:0008947!1.06e-07!17;UBERON:0003258!1.06e-07!17;UBERON:0000468!1.83e-07!333;UBERON:0002100!2.17e-07!98;UBERON:0004535!3.47e-07!23;UBERON:0001009!3.47e-07!23;UBERON:0000481!3.94e-07!230;UBERON:0005157!4.60e-07!27;UBERON:0001007!4.73e-07!128;UBERON:0001555!4.73e-07!128;UBERON:0007026!4.73e-07!128;UBERON:0000160!5.15e-07!43;UBERON:0007100!5.76e-07!18;UBERON:0000948!5.76e-07!18;UBERON:0005498!5.76e-07!18;UBERON:0004140!5.76e-07!18;UBERON:0009881!5.76e-07!18;UBERON:0004141!5.76e-07!18;UBERON:0003084!5.76e-07!18;UBERON:0007005!5.76e-07!18;UBERON:0004139!5.76e-07!18;UBERON:0004291!5.76e-07!18;UBERON:0004921!6.08e-07!126;UBERON:0004185!6.08e-07!126;UBERON:0004119!6.90e-07!130;UBERON:0000925!6.90e-07!130;UBERON:0006595!6.90e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.90e-11,79;UBERON:0002100,1.20e-09,90;UBERON:0002048,2.33e-09,14;UBERON:0000117,2.33e-09,14;UBERON:0000171,2.33e-09,14;UBERON:0000170,2.33e-09,14;UBERON:0005597,2.33e-09,14;UBERON:0000118,2.33e-09,14;UBERON:0009569,6.51e-09,66;UBERON:0005153,2.72e-08,17;UBERON:0005178,8.32e-08,17;UBERON:0005181,8.32e-08,17;UBERON:0002224,8.32e-08,17;UBERON:0000915,8.32e-08,17;UBERON:0008947,8.32e-08,17;UBERON:0003258,8.32e-08,17;UBERON:0004535,2.76e-07,23;UBERON:0001009,2.76e-07,23;UBERON:0007100,4.63e-07,18;UBERON:0000948,4.63e-07,18;UBERON:0005498,4.63e-07,18;UBERON:0004140,4.63e-07,18;UBERON:0009881,4.63e-07,18;UBERON:0004141,4.63e-07,18;UBERON:0003084,4.63e-07,18;UBERON:0007005,4.63e-07,18;UBERON:0004139,4.63e-07,18;UBERON:0004291,4.63e-07,18 | |||
|phase1_expression=3.04282809499109,0.697950815278722,2.27499619694768,0.90739263392049,3.50627010962443,7.38668796412315,5.37309073369709,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,5.27268398936633,0.0992909512008853,0,5.11975752938901,3.21172993494038,2.29692785646008,2.15380998079537,4.30942465371778,7.60093677825496,6.5527833737582,4.21287970245079,0,0,0,8.66554859253824,8.81043620400009,12.0459920194798,0,0,0,0,0,0,3.52511090331616,3.54819259268301,3.67093504323363,11.7358701652206,1.96222640742402,4.17403747195497,0.972149495371417,2.93971485413261,2.87505128729943,0,0,0,5.91696702882678,5.15760191889762,3.6097046459421,0.202316460859598,0.528990979272033,1.90149421051854,3.72728985276045,4.4464739805557,0.899899717281399,0,0,1.79760066311043,1.53687322128622,0.518448061542388,1.35005938331691,1.26194976810829,0.856952953211411,1.54607978666129,0.489963196859816,0.862609239164127,0,1.10115880999389,0.893811366596314,0.46081959976873,0.923204014111357,0.457438218012048,0.52091337055676,0.279182999001381,2.25105044012672,0.763991238884051,2.35702868378934,0.854230084794618,0.559198337475902,0.37863096666592,0.377857800533928,48.6972341018819,8.60423876981386,0,3.77792234146472,3.89865850468601,3.58421509677868,4.35377702408431,2.04516387093669,2.33807404142582,2.47337702157238,2.53518155598025,2.56652954828636,7.64415719119937,7.11066703153331,3.030874574157,2.78695852022608,3.0331466700887,3.53970027129086,1.55362730188303,6.82833839698194,6.07198643681475,3.95805121805784,5.30415643688935,3.91878865436819,6.93773372100658,4.02133092254962,2.47194967734374,5.49477556295664,0.884610551949874,4.36770494858005,2.20841518460394,0.969750506270444,7.45567044872489,0.585561594023094,0.628340120440365,7.15279754584056,0,0.599902730993408,0,0.599162557619291,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0.83115217823824,1.1356888414743,6.21220119486929,3.11017426525233,0.758168275301024,2.31486041475121,4.55421550369463,2.5289231487682,3.42118046630164,2.71268672104287,2.24520447199382,1.92170580427275,2.15513966487376,1.29351685369508,12.5029435901048,8.69887968771969,9.14945845652534,6.35667624039967,7.22922847986555,7.66154766348766,5.76189981942242,5.9710280045548,0,0,0,2.89976081549703,6.80125573945179,7.02242039697958,7.10234206755631,5.70616272067471,5.55361606394562,9.30135779001631,8.04820204198858,7.47298191149885,5.9241545968853,11.4917224855367,11.5117709555115,11.1111990443253,9.66020507280623,11.8101648509127,0.420579897128254,1.02904612379284,0.330418782983798,6.34681359992506,5.75878276445132,6.96710015581316,7.21657783403723,4.23535401709019,3.7804267453628,3.99473814836374,5.21981967698963,3.95277491337626,7.03738584640755,3.38226002469956,7.79856348476481,7.19055526923377,5.61958929674205,5.57595565112228,6.2590407314517,5.36968009265725,4.50830942692322,5.90588850751411,9.30971938404604,7.50453272826409,9.29577095726582,6.34723636312289,6.43694784149637,9.00799296629144,7.41131567717872,1.50160595144485,2.16214894624523,2.47348323623339,2.23146133527353,2.41177159752417,3.56476192493988,2.01387296215567,3.40483976227574,3.29473695825698,8.62609239164127,7.44281895337007,6.86482880852033,7.82994521636046,3.40855085691633,5.30687873499704,13.6717360723287,5.68474235311454,5.70377417547091,8.82674446030978,12.4385831592906,9.38035041674168,7.61739650835244,17.9522956029175,14.3447981136634,13.2878813789265,13.8725648732014,15.7308782127108,14.6782234586011,17.0685889126184,0,0,3.44234991113325,4.96686143348518,1.12385412991454,0.234423373184406,1.96721934452011,5.55436039849621,1.26203287766503,1.95219372148319,0.861693590931196,1.67278158566786,1.55959071857676,0.849229592366497,1.21443210502468,2.63030272120181,2.76701444562566,1.28528526568723,3.54850213020672,4.27357448801413,6.18970445543589,4.94910368917606,2.65490276679926,6.06951590387454,8.16273603804828,5.65815239267694,8.85905678642318,5.22639751504677,5.68542244970086,4.36240475373007,4.9909632973861,4.42451461110142,6.32511651449993,2.06271086496374,2.38307724027652,4.50152735078276,5.56242340265844,5.5727629108214,7.44828981297549,9.27517851530767,9.05019613311665,8.82948352432338,2.11204537257339,3.1774810629573,2.42581237860458,4.122156323537,8.07322133479528,4.88534691918062,3.34242563208782,4.59594519286172,7.28702091574627,0.556275906031529,1.02522528478712,6.60437977482312,3.33350149265481,1.50694765603753,1.77702496037333,0.686334519619568,0.169978429993855,0,0,1.90934123603023,7.90839983952838,5.08298667817122,3.45617090629764,6.27264888043406,3.71216358368502,3.10187996685088,6.36431609085087,2.87931536182433,8.81381818384192,1.86401793926078,0,4.03694674318743,4.13646226142744,3.11121901350476,5.68303223302017,5.23763989021412,5.04636126176742,4.1665403150064,3.14578033277133,0.724752362478018,1.15212002503146,0.316011120628178,4.05450430580328,3.49217254360413,2.33857481360031,1.9692936523423,1.78813219303138,0.841368146639782,0.738447635872886,1.00966449948148,0.914481679859998,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| |phase1_expression=3.04282809499109,0.697950815278722,2.27499619694768,0.90739263392049,3.50627010962443,7.38668796412315,5.37309073369709,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,5.27268398936633,0.0992909512008853,0,5.11975752938901,3.21172993494038,2.29692785646008,2.15380998079537,4.30942465371778,7.60093677825496,6.5527833737582,4.21287970245079,0,0,0,8.66554859253824,8.81043620400009,12.0459920194798,0,0,0,0,0,0,3.52511090331616,3.54819259268301,3.67093504323363,11.7358701652206,1.96222640742402,4.17403747195497,0.972149495371417,2.93971485413261,2.87505128729943,0,0,0,5.91696702882678,5.15760191889762,3.6097046459421,0.202316460859598,0.528990979272033,1.90149421051854,3.72728985276045,4.4464739805557,0.899899717281399,0,0,1.79760066311043,1.53687322128622,0.518448061542388,1.35005938331691,1.26194976810829,0.856952953211411,1.54607978666129,0.489963196859816,0.862609239164127,0,1.10115880999389,0.893811366596314,0.46081959976873,0.923204014111357,0.457438218012048,0.52091337055676,0.279182999001381,2.25105044012672,0.763991238884051,2.35702868378934,0.854230084794618,0.559198337475902,0.37863096666592,0.377857800533928,48.6972341018819,8.60423876981386,0,3.77792234146472,3.89865850468601,3.58421509677868,4.35377702408431,2.04516387093669,2.33807404142582,2.47337702157238,2.53518155598025,2.56652954828636,7.64415719119937,7.11066703153331,3.030874574157,2.78695852022608,3.0331466700887,3.53970027129086,1.55362730188303,6.82833839698194,6.07198643681475,3.95805121805784,5.30415643688935,3.91878865436819,6.93773372100658,4.02133092254962,2.47194967734374,5.49477556295664,0.884610551949874,4.36770494858005,2.20841518460394,0.969750506270444,7.45567044872489,0.585561594023094,0.628340120440365,7.15279754584056,0,0.599902730993408,0,0.599162557619291,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0.83115217823824,1.1356888414743,6.21220119486929,3.11017426525233,0.758168275301024,2.31486041475121,4.55421550369463,2.5289231487682,3.42118046630164,2.71268672104287,2.24520447199382,1.92170580427275,2.15513966487376,1.29351685369508,12.5029435901048,8.69887968771969,9.14945845652534,6.35667624039967,7.22922847986555,7.66154766348766,5.76189981942242,5.9710280045548,0,0,0,2.89976081549703,6.80125573945179,7.02242039697958,7.10234206755631,5.70616272067471,5.55361606394562,9.30135779001631,8.04820204198858,7.47298191149885,5.9241545968853,11.4917224855367,11.5117709555115,11.1111990443253,9.66020507280623,11.8101648509127,0.420579897128254,1.02904612379284,0.330418782983798,6.34681359992506,5.75878276445132,6.96710015581316,7.21657783403723,4.23535401709019,3.7804267453628,3.99473814836374,5.21981967698963,3.95277491337626,7.03738584640755,3.38226002469956,7.79856348476481,7.19055526923377,5.61958929674205,5.57595565112228,6.2590407314517,5.36968009265725,4.50830942692322,5.90588850751411,9.30971938404604,7.50453272826409,9.29577095726582,6.34723636312289,6.43694784149637,9.00799296629144,7.41131567717872,1.50160595144485,2.16214894624523,2.47348323623339,2.23146133527353,2.41177159752417,3.56476192493988,2.01387296215567,3.40483976227574,3.29473695825698,8.62609239164127,7.44281895337007,6.86482880852033,7.82994521636046,3.40855085691633,5.30687873499704,13.6717360723287,5.68474235311454,5.70377417547091,8.82674446030978,12.4385831592906,9.38035041674168,7.61739650835244,17.9522956029175,14.3447981136634,13.2878813789265,13.8725648732014,15.7308782127108,14.6782234586011,17.0685889126184,0,0,3.44234991113325,4.96686143348518,1.12385412991454,0.234423373184406,1.96721934452011,5.55436039849621,1.26203287766503,1.95219372148319,0.861693590931196,1.67278158566786,1.55959071857676,0.849229592366497,1.21443210502468,2.63030272120181,2.76701444562566,1.28528526568723,3.54850213020672,4.27357448801413,6.18970445543589,4.94910368917606,2.65490276679926,6.06951590387454,8.16273603804828,5.65815239267694,8.85905678642318,5.22639751504677,5.68542244970086,4.36240475373007,4.9909632973861,4.42451461110142,6.32511651449993,2.06271086496374,2.38307724027652,4.50152735078276,5.56242340265844,5.5727629108214,7.44828981297549,9.27517851530767,9.05019613311665,8.82948352432338,2.11204537257339,3.1774810629573,2.42581237860458,4.122156323537,8.07322133479528,4.88534691918062,3.34242563208782,4.59594519286172,7.28702091574627,0.556275906031529,1.02522528478712,6.60437977482312,3.33350149265481,1.50694765603753,1.77702496037333,0.686334519619568,0.169978429993855,0,0,1.90934123603023,7.90839983952838,5.08298667817122,3.45617090629764,6.27264888043406,3.71216358368502,3.10187996685088,6.36431609085087,2.87931536182433,8.81381818384192,1.86401793926078,0,4.03694674318743,4.13646226142744,3.11121901350476,5.68303223302017,5.23763989021412,5.04636126176742,4.1665403150064,3.14578033277133,0.724752362478018,1.15212002503146,0.316011120628178,4.05450430580328,3.49217254360413,2.33857481360031,1.9692936523423,1.78813219303138,0.841368146639782,0.738447635872886,1.00966449948148,0.914481679859998,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| ||
|short_description=p3@Ephb4 | |||
}} | }} |
Latest revision as of 14:42, 25 September 2015
Short description: | p3@Ephb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ephb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1813 |
Association with transcript: | 0bp_to_ENSMUST00000111055_5end |
EntrezGene: | Ephb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.90e-11 | 79 |
trunk | 1.20e-09 | 90 |
lung | 2.33e-09 | 14 |
respiratory tube | 2.33e-09 | 14 |
respiration organ | 2.33e-09 | 14 |
pair of lungs | 2.33e-09 | 14 |
lung primordium | 2.33e-09 | 14 |
lung bud | 2.33e-09 | 14 |
subdivision of trunk | 6.51e-09 | 66 |
epithelial bud | 2.72e-08 | 17 |
thoracic cavity element | 8.32e-08 | 17 |
thoracic segment organ | 8.32e-08 | 17 |
thoracic cavity | 8.32e-08 | 17 |
thoracic segment of trunk | 8.32e-08 | 17 |
respiratory primordium | 8.32e-08 | 17 |
endoderm of foregut | 8.32e-08 | 17 |
cardiovascular system | 2.76e-07 | 23 |
circulatory system | 2.76e-07 | 23 |
primary circulatory organ | 4.63e-07 | 18 |
heart | 4.63e-07 | 18 |
primitive heart tube | 4.63e-07 | 18 |
primary heart field | 4.63e-07 | 18 |
anterior lateral plate mesoderm | 4.63e-07 | 18 |
heart tube | 4.63e-07 | 18 |
heart primordium | 4.63e-07 | 18 |
cardiac mesoderm | 4.63e-07 | 18 |
cardiogenic plate | 4.63e-07 | 18 |
heart rudiment | 4.63e-07 | 18 |