Personal tools

FFCP PHASE1:Mm9::chr5:116082045..116082063,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:116082045..116082063,+
|DHSsupport=NA
|short_description=p3@Rab35
|DPIdataset=NA
|description=CAGE_peak_3_at_Rab35_5end
|association_with_transcript=49bp_to_NM_198163,uc008zei.1_5end
|EntrezGene=77407
|EntrezGene=77407
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3U0T9,Q6PHN9
|UniProt=Q3U0T9,Q6PHN9
|association_with_transcript=49bp_to_NM_198163,uc008zei.1_5end
|cluster_id=chr5:116082045..116082063,+
|description=CAGE_peak_3_at_Rab35_5end
|id=chr5:116082045..116082063,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0.960893082628764,6.2815573375085,4.09499315450582,2.11724947914781,4.00716583957078,2.51818907867835,3.73780224952841,1.54947988129892,5.77233760821834,3.04283884218592,0.513653904676515,0.398860794976682,4.45121897821135,2.36035086531293,0.999329285446988,1.61980213911861,0.699561878128147,0.946386496074713,0.411343300817216,1.27316895539409,1.61582251287033,1.78723712161594,2.61199789138935,2.71987118748791,1.83527424853736,3.44539178469012,4.30761996159075,2.37018355954478,3.23039813075836,2.77233142735924,1.99557459589774,0.635030673459631,0.61506478758457,15.8481681015439,1.44425809875637,1.82858109894342,1.22501613757421,4.60384793810598,8.5946887897618,8.37637990358077,9.99993529652724,12.294818729252,7.76816564849846,0.503587271902309,1.21652317463417,1.65192076945513,3.12956537739216,1.96222640742402,2.19686182734472,3.30530828426282,0.979904951377538,4.31257693094915,3.18786951509699,8.70434570413613,5.04140698713696,3.34437266846731,4.58453503902011,2.06268836910977,2.02316460859598,1.5869729378161,1.26766280701236,1.69422266034566,0.889294796111139,10.7987966073768,6.92206453796882,4.9733608046227,4.19440154725767,3.07374644257244,0.933206510776299,1.62007125998029,1.47227472945967,2.85650984403804,1.98781686856452,1.10241719293459,1.62937300731002,0,1.10115880999389,2.042997409363,1.53606533256243,1.18697658957174,1.18933936683133,1.56274011167028,1.95428099300967,1.12552522006336,2.13917546887534,2.06240009831567,1.70846016958924,1.86399445825301,1.4387976733305,2.11600368298999,4.05810284182349,0.860423876981386,0.679971333707751,1.61910957491345,0,1.34408066129201,0.842666520790511,1.87473354835864,1.55871602761721,1.06001872353102,0.563373679106722,3.84979432242953,2.54805239706646,0,0.865964164044856,1.77351905832569,4.04419556011827,1.94112595522402,2.33044095282455,1.63286352971307,1.56136794089522,0.913396434936424,1.15307748628029,1.65794904607885,1.52865319276416,2.13633205260448,4.20231445148436,1.87979163995885,2.65383165584962,1.94120219936891,2.20841518460394,0.969750506270444,0,0.585561594023094,0.41889341362691,3.32094171771169,1.31796636956512,4.19931911695385,2.66847476853436,0.748953197024114,2.28750301409313,1.25654352112864,0.869121600961382,1.27857728665165,0.41557608911912,1.29793010454206,1.01839363850316,2.36373244159177,0,1.89397670297827,0.520481771850815,0.229902104433473,1.0803727788321,1.35634336052144,1.2246569847239,0.640568601424249,0.655912071918102,0.517406741478031,0.646703978798527,0.756424320671277,0.703804496655795,1.31517439456545,0,0.696504333044333,1.4404749548556,0.398068533636986,3.51106593656617,2.57347907114715,1.42081749697796,1.65700618028402,0.938104239924385,1.62055855314913,1.18372367792605,1.96764231747404,2.00547246753592,1.62773761325285,4.29237442239391,2.21854150497622,2.79751744852917,2.29834449710733,1.94565142910054,3.50879969820798,1.75640092232841,3.22095405024892,0.841159794256509,0.92614151141356,5.61711931072457,3.17340679996253,0.853153002140936,1.16118335930219,1.28867461322093,2.01683524623343,2.00140239460383,2.28270751335071,3.32170343081158,2.47048432086016,1.25667604400135,1.1937388322469,3.31438948102504,0.898819408654221,3.6743468478698,3.98282546508734,0.758671603812327,0.913988100877831,1.1270773567308,1.4255592949172,0.969762435838129,1.8936671370386,1.64414996523069,2.06654207171443,2.511979645462,1.60416313098341,0.592905254174298,1.33476084572875,2.94838492669805,2.69834534861824,1.82574109249653,1.92941727801933,2.5462585178142,0.575392274901621,0.648540907100142,0.274561413188081,4.31304619582064,1.48856379067401,2.49630138491648,1.76805214562978,1.07638448113147,1.92977408545347,4.61882975416512,0.757965647081939,0.977789858652155,1.18821560042632,1.64283173801951,1.67506257441816,2.38043640886014,3.70753930929818,0.472905432318573,2.6575762757853,3.50800491046472,3.27726629431476,2.24490476425664,4.48412081602686,3.01582567878545,1.08781136763742,1.96705709207614,1.93155722413313,0.80275294993896,0.820481806145422,1.47541450839008,2.27223834483936,0.94652465824877,0.780877488593277,0.646270193198397,1.43381278771531,0.891194696329576,1.69845918473299,0.809621403349789,0.876767573733936,0.790575555893047,0.642642632843614,1.27746076687442,1.24645922567079,0.81443479676788,1.97964147567043,1.32745138339963,0.971122544619926,0.906970670894253,0,0.590603785761546,1.53717573971964,3.35956781118687,0.363533729477506,1.06949213515416,0.632073515871632,3.16255825724996,3.09406629744561,0.340439605753788,0.540183282093931,0.905510786479282,0.857348140126369,0.886701168211368,1.96205699362278,1.15184314421485,2.74018454203139,1.87737366450968,1.90648863777438,1.7642271844397,1.81374878235628,1.61464426695906,1.38719727334758,1.90995750405018,0.820704498725306,1.45740418314925,0.370850604021019,1.70870880797853,2.47664241555867,1.66675074632741,1.13021074202815,2.1871076435364,1.60144721244566,6.62915876976036,5.59805809294632,5.11339903076368,4.77335309007557,0.632671987162271,2.43983360552218,1.51207477150522,1.67270636811575,2.62035076495413,2.56242258131159,2.56225712748541,2.35580347785627,2.07383957266869,1.24267862617385,0,1.34564891439581,1.32366792365678,0.777804753376191,1.16243841129958,1.18269287843545,1.40828686374905,0.911430693907651,0.943734099831398,0.483168241652012,1.44015003128933,1.26404448251271,1.21635129174099,1.74608627180206,1.29920822977795,1.79026695667481,1.98681354781265,1.44234539423963,1.32920574457119,1.9183625490148,1.98137697303,2.11734988787365,2.14407337627455,1.82802499116626,1.98690733708667,1.36038230169127,1.99787358036658,2.42227412845584,2.51826924546118,2.12508553435409,3.19060208267009,1.64836461840539,3.21552568618599,0.501572104035363,0,0.920650473014354,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0.900642406448441,0,1.55328093525546,0.830298780673413,0.798049746802062,0.512200817262403,1.94485373654635,2.09613162627982,2.02227859295016,1.33348036680969,1.23621034343337,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,1.49826411951812,1.08842759088278,1.83793500657962,0.476293691283074,1.97003354106254,3.27945674788299,1.64834360321323,1.32479028120958,1.71434626192708,1.4198064492747,1.66905332963125,1.74415699958794,1.59985946706062,1.01537529470012,1.82927972872773,1.05227884575137,1.90125759384206,0.561142271657738,0.474540072496697,1.0835493061312,2.04615521584845,1.85924209423159,1.15743966588685,1.99848462350357,0.935726433781634,1.07435527024149,1.3390183244819,1.76473135295612,1.15933917810211
|phase1_expression=0.960893082628764,6.2815573375085,4.09499315450582,2.11724947914781,4.00716583957078,2.51818907867835,3.73780224952841,1.54947988129892,5.77233760821834,3.04283884218592,0.513653904676515,0.398860794976682,4.45121897821135,2.36035086531293,0.999329285446988,1.61980213911861,0.699561878128147,0.946386496074713,0.411343300817216,1.27316895539409,1.61582251287033,1.78723712161594,2.61199789138935,2.71987118748791,1.83527424853736,3.44539178469012,4.30761996159075,2.37018355954478,3.23039813075836,2.77233142735924,1.99557459589774,0.635030673459631,0.61506478758457,15.8481681015439,1.44425809875637,1.82858109894342,1.22501613757421,4.60384793810598,8.5946887897618,8.37637990358077,9.99993529652724,12.294818729252,7.76816564849846,0.503587271902309,1.21652317463417,1.65192076945513,3.12956537739216,1.96222640742402,2.19686182734472,3.30530828426282,0.979904951377538,4.31257693094915,3.18786951509699,8.70434570413613,5.04140698713696,3.34437266846731,4.58453503902011,2.06268836910977,2.02316460859598,1.5869729378161,1.26766280701236,1.69422266034566,0.889294796111139,10.7987966073768,6.92206453796882,4.9733608046227,4.19440154725767,3.07374644257244,0.933206510776299,1.62007125998029,1.47227472945967,2.85650984403804,1.98781686856452,1.10241719293459,1.62937300731002,0,1.10115880999389,2.042997409363,1.53606533256243,1.18697658957174,1.18933936683133,1.56274011167028,1.95428099300967,1.12552522006336,2.13917546887534,2.06240009831567,1.70846016958924,1.86399445825301,1.4387976733305,2.11600368298999,4.05810284182349,0.860423876981386,0.679971333707751,1.61910957491345,0,1.34408066129201,0.842666520790511,1.87473354835864,1.55871602761721,1.06001872353102,0.563373679106722,3.84979432242953,2.54805239706646,0,0.865964164044856,1.77351905832569,4.04419556011827,1.94112595522402,2.33044095282455,1.63286352971307,1.56136794089522,0.913396434936424,1.15307748628029,1.65794904607885,1.52865319276416,2.13633205260448,4.20231445148436,1.87979163995885,2.65383165584962,1.94120219936891,2.20841518460394,0.969750506270444,0,0.585561594023094,0.41889341362691,3.32094171771169,1.31796636956512,4.19931911695385,2.66847476853436,0.748953197024114,2.28750301409313,1.25654352112864,0.869121600961382,1.27857728665165,0.41557608911912,1.29793010454206,1.01839363850316,2.36373244159177,0,1.89397670297827,0.520481771850815,0.229902104433473,1.0803727788321,1.35634336052144,1.2246569847239,0.640568601424249,0.655912071918102,0.517406741478031,0.646703978798527,0.756424320671277,0.703804496655795,1.31517439456545,0,0.696504333044333,1.4404749548556,0.398068533636986,3.51106593656617,2.57347907114715,1.42081749697796,1.65700618028402,0.938104239924385,1.62055855314913,1.18372367792605,1.96764231747404,2.00547246753592,1.62773761325285,4.29237442239391,2.21854150497622,2.79751744852917,2.29834449710733,1.94565142910054,3.50879969820798,1.75640092232841,3.22095405024892,0.841159794256509,0.92614151141356,5.61711931072457,3.17340679996253,0.853153002140936,1.16118335930219,1.28867461322093,2.01683524623343,2.00140239460383,2.28270751335071,3.32170343081158,2.47048432086016,1.25667604400135,1.1937388322469,3.31438948102504,0.898819408654221,3.6743468478698,3.98282546508734,0.758671603812327,0.913988100877831,1.1270773567308,1.4255592949172,0.969762435838129,1.8936671370386,1.64414996523069,2.06654207171443,2.511979645462,1.60416313098341,0.592905254174298,1.33476084572875,2.94838492669805,2.69834534861824,1.82574109249653,1.92941727801933,2.5462585178142,0.575392274901621,0.648540907100142,0.274561413188081,4.31304619582064,1.48856379067401,2.49630138491648,1.76805214562978,1.07638448113147,1.92977408545347,4.61882975416512,0.757965647081939,0.977789858652155,1.18821560042632,1.64283173801951,1.67506257441816,2.38043640886014,3.70753930929818,0.472905432318573,2.6575762757853,3.50800491046472,3.27726629431476,2.24490476425664,4.48412081602686,3.01582567878545,1.08781136763742,1.96705709207614,1.93155722413313,0.80275294993896,0.820481806145422,1.47541450839008,2.27223834483936,0.94652465824877,0.780877488593277,0.646270193198397,1.43381278771531,0.891194696329576,1.69845918473299,0.809621403349789,0.876767573733936,0.790575555893047,0.642642632843614,1.27746076687442,1.24645922567079,0.81443479676788,1.97964147567043,1.32745138339963,0.971122544619926,0.906970670894253,0,0.590603785761546,1.53717573971964,3.35956781118687,0.363533729477506,1.06949213515416,0.632073515871632,3.16255825724996,3.09406629744561,0.340439605753788,0.540183282093931,0.905510786479282,0.857348140126369,0.886701168211368,1.96205699362278,1.15184314421485,2.74018454203139,1.87737366450968,1.90648863777438,1.7642271844397,1.81374878235628,1.61464426695906,1.38719727334758,1.90995750405018,0.820704498725306,1.45740418314925,0.370850604021019,1.70870880797853,2.47664241555867,1.66675074632741,1.13021074202815,2.1871076435364,1.60144721244566,6.62915876976036,5.59805809294632,5.11339903076368,4.77335309007557,0.632671987162271,2.43983360552218,1.51207477150522,1.67270636811575,2.62035076495413,2.56242258131159,2.56225712748541,2.35580347785627,2.07383957266869,1.24267862617385,0,1.34564891439581,1.32366792365678,0.777804753376191,1.16243841129958,1.18269287843545,1.40828686374905,0.911430693907651,0.943734099831398,0.483168241652012,1.44015003128933,1.26404448251271,1.21635129174099,1.74608627180206,1.29920822977795,1.79026695667481,1.98681354781265,1.44234539423963,1.32920574457119,1.9183625490148,1.98137697303,2.11734988787365,2.14407337627455,1.82802499116626,1.98690733708667,1.36038230169127,1.99787358036658,2.42227412845584,2.51826924546118,2.12508553435409,3.19060208267009,1.64836461840539,3.21552568618599,0.501572104035363,0,0.920650473014354,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0.900642406448441,0,1.55328093525546,0.830298780673413,0.798049746802062,0.512200817262403,1.94485373654635,2.09613162627982,2.02227859295016,1.33348036680969,1.23621034343337,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,1.49826411951812,1.08842759088278,1.83793500657962,0.476293691283074,1.97003354106254,3.27945674788299,1.64834360321323,1.32479028120958,1.71434626192708,1.4198064492747,1.66905332963125,1.74415699958794,1.59985946706062,1.01537529470012,1.82927972872773,1.05227884575137,1.90125759384206,0.561142271657738,0.474540072496697,1.0835493061312,2.04615521584845,1.85924209423159,1.15743966588685,1.99848462350357,0.935726433781634,1.07435527024149,1.3390183244819,1.76473135295612,1.15933917810211
|short_description=p3@Rab35
}}
}}

Latest revision as of 17:47, 1 October 2015

Short description:p3@Rab35
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rab35_5end
Coexpression cluster:NA
Association with transcript: 49bp_to_NM_198163, uc008zei.1_5end
EntrezGene:Rab35
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rab35

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:116082045..116082063,%2B&oldid=4314743"