FFCP PHASE1:Mm9::chr5:104522263..104522285,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:104522263..104522285,- to FFCP PHASE1:Mm9::chr5:104522263..104522285,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:104522263..104522285,- | |||
|description=CAGE_peak_at_chr5:104522263..104522285,- | |||
|id=chr5:104522263..104522285,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.04e-11!52;UBERON:0005068!9.04e-11!52;UBERON:0006241!9.04e-11!52;UBERON:0007135!9.04e-11!52;UBERON:0000955!4.33e-10!50;UBERON:0006238!4.33e-10!50;UBERON:0002616!1.23e-09!49;UBERON:0000033!6.67e-09!63;UBERON:0002020!1.10e-08!34;UBERON:0002346!1.48e-08!71;UBERON:0003075!1.48e-08!71;UBERON:0007284!1.48e-08!71;UBERON:0001017!2.36e-08!73;UBERON:0005743!2.36e-08!73;UBERON:0004111!3.45e-08!122;UBERON:0002021!8.11e-08!10;UBERON:0000411!8.11e-08!10;UBERON:0001950!8.11e-08!10;UBERON:0000073!1.05e-07!75;UBERON:0001016!1.05e-07!75;UBERON:0000025!1.15e-07!114;UBERON:0003080!4.50e-07!40;UBERON:0000468!4.73e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-12,54;UBERON:0001049,7.56e-11,52;UBERON:0005068,7.56e-11,52;UBERON:0006241,7.56e-11,52;UBERON:0007135,7.56e-11,52;UBERON:0002021,1.39e-09,10;UBERON:0000411,1.39e-09,10;UBERON:0001950,1.39e-09,10;UBERON:0000025,1.53e-09,114;UBERON:0002020,2.14e-09,34;UBERON:0004111,5.52e-09,122;UBERON:0000955,4.01e-08,47;UBERON:0006238,4.01e-08,47;UBERON:0002346,5.70e-08,64;UBERON:0003075,5.70e-08,64;UBERON:0007284,5.70e-08,64;UBERON:0002616,1.24e-07,46;UBERON:0001017,1.51e-07,73;UBERON:0010314,2.65e-07,92;UBERON:0001016,5.33e-07,75 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.777719596297134,1.39986421625363,0,0,0,0,0.771778308107841,2.29226751951005,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.725827286159344,1.35005938331691,0.210324961351382,5.14171771926846,5.07997644188711,0.734944795289724,0.287536413054709,0,17.6185409599022,30.9003358166154,33.0254046500923,0,0.548925861614458,0.52091337055676,16.7509799400829,17.4456409109821,24.6005178920664,29.4628585473668,22.3523538854592,2.42319279572891,0,0.226714680320357,0,0,0,0,0,0,1.12355536105401,1.02258193546835,0.779358013808606,0.70667914902068,0.845060518660083,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0,1.04091196059682,0.304465478312141,1.15307748628029,0.452167921657868,0.940709657085638,0.376999773989026,0.494389935468748,0.144599356919912,0,0.970601099684455,1.76673214768315,1.45462575940567,1.86391761218122,6.14839673724249,9.21565509979202,0.255457055208591,0,0,0,10.0359728401231,7.77751024791665,1.13088916901578,3.99795936442236,9.2057564638919,9.3504620051802,10.8701646255398,6.51771928642024,0.248813941220186,0.758168275301024,0.631325567659422,0.260240885925407,0,0,1.50704817835715,0.884474488967262,1.0249097622788,0.749613796477831,1.81092359517311,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0,0.234526059981096,0.540186184383045,0.710234206755631,1.37734962223183,2.77680803197281,3.0229412817553,0.536546802799238,2.45207218971056,1.15191894939436,7.88003827579657,3.32382119138008,1.60819986167866,3.07370161407471,2.01309628140558,4.41608891984667,3.08713837137853,0,0.528901133327089,2.13288250535234,1.39342003116263,1.15980715189884,1.21010114774006,2.00140239460383,0.380451252225118,1.89811624617805,1.97638745668813,3.01602250560323,1.1937388322469,1.16978452271472,3.59527763461689,3.45820879799511,1.39398891278057,0.189667900953082,0.799739588268102,0,0.814605311381257,1.55161989734101,0.771494018793504,0.442655759869801,1.03327103585722,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,7.18841032636773,0,0.936113019343682,0.252578877947112,0,0,2.03228509183265,0.37898282354097,1.30371981153621,1.35796068620151,5.86725620721255,2.68010011906905,4.76087281772027,5.85400943573396,2.36452716159286,6.42247599981447,3.50800491046472,7.70157579163969,8.11619414769709,5.64131328467895,0,0,0,0.275936746304732,10.1146871692309,8.43924143463863,0,2.01976741763498,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,6.10510501201433,1.70328102249922,2.13678724400706,4.23506094319298,3.62934270539578,0,2.42780636154981,0.906970670894253,2.64047111658257,0.885905678642318,0.922305443831782,1.29214146584111,1.45413491791002,2.49548164869305,0.632073515871632,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.905510786479282,0.428674070063185,0.177340233642274,1.78368817602071,1.81003922662333,0.304464949114599,0,0.42366414172764,0.220528398054962,0,0.807322133479528,0.542816324353403,0.358117032009409,0.164140899745061,3.20628920292836,10.9400928186201,0.512612642393558,1.23832120777933,0.925972636848558,0.941842285023455,0.410082683163076,0,0,0,0,0,0.316335993581135,0.813277868507395,2.80813886136683,5.22720740036172,3.9305261474312,4.45052343069908,3.30613822901344,3.14107130380836,2.20345454596048,0.621339313086926,0,0.598066184175915,0.165458490457098,0.194451188344048,1.42075805825504,3.04121025883401,2.8165737274981,2.0832701575032,1.15345278868282,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0.649604114888975,0.179026695667481,0.198681354781265,0.480781798079875,0,0.201932899896295,0.15241361331,0.302478555410522,0.292373642219257,0.288635524920988,0.467507608726276,0.906921534460845,0,0,0,4.056981474676,2.25218970541418,2.56412273974171,1.2862102744744,1.00314420807073,24.2843292325339,14.7304075682297,18.3326564300607,8.42080593484069,7.53590771747707,21.1510291269116,16.2005400055633,14.8605997063993,20.3914084042892,18.1216109113137,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.824140228955577,0.962757628775446,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,0.832326981263301,0.746661096422973,1.42888107384922,0.927074607558844,1.73618298417335,2.06042950401653,1.76638704161277,3.42869252385415,1.59728225543404,2.14592570952589,1.59881058295561,1.31753132581463,1.35383372626682,2.0122077016005,3.94604567156764,1.22223702461276,2.24456908663095,1.06771516311757,2.46261205938909,1.22769312950907,0.77468420592983,0.771626443924566,0.499621155875892,0.701794825336225,0.859484216193193,1.3390183244819,1.10295709559758,0.695603506861264 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|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.777719596297134,1.39986421625363,0,0,0,0,0.771778308107841,2.29226751951005,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.725827286159344,1.35005938331691,0.210324961351382,5.14171771926846,5.07997644188711,0.734944795289724,0.287536413054709,0,17.6185409599022,30.9003358166154,33.0254046500923,0,0.548925861614458,0.52091337055676,16.7509799400829,17.4456409109821,24.6005178920664,29.4628585473668,22.3523538854592,2.42319279572891,0,0.226714680320357,0,0,0,0,0,0,1.12355536105401,1.02258193546835,0.779358013808606,0.70667914902068,0.845060518660083,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0,1.04091196059682,0.304465478312141,1.15307748628029,0.452167921657868,0.940709657085638,0.376999773989026,0.494389935468748,0.144599356919912,0,0.970601099684455,1.76673214768315,1.45462575940567,1.86391761218122,6.14839673724249,9.21565509979202,0.255457055208591,0,0,0,10.0359728401231,7.77751024791665,1.13088916901578,3.99795936442236,9.2057564638919,9.3504620051802,10.8701646255398,6.51771928642024,0.248813941220186,0.758168275301024,0.631325567659422,0.260240885925407,0,0,1.50704817835715,0.884474488967262,1.0249097622788,0.749613796477831,1.81092359517311,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0,0.234526059981096,0.540186184383045,0.710234206755631,1.37734962223183,2.77680803197281,3.0229412817553,0.536546802799238,2.45207218971056,1.15191894939436,7.88003827579657,3.32382119138008,1.60819986167866,3.07370161407471,2.01309628140558,4.41608891984667,3.08713837137853,0,0.528901133327089,2.13288250535234,1.39342003116263,1.15980715189884,1.21010114774006,2.00140239460383,0.380451252225118,1.89811624617805,1.97638745668813,3.01602250560323,1.1937388322469,1.16978452271472,3.59527763461689,3.45820879799511,1.39398891278057,0.189667900953082,0.799739588268102,0,0.814605311381257,1.55161989734101,0.771494018793504,0.442655759869801,1.03327103585722,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,7.18841032636773,0,0.936113019343682,0.252578877947112,0,0,2.03228509183265,0.37898282354097,1.30371981153621,1.35796068620151,5.86725620721255,2.68010011906905,4.76087281772027,5.85400943573396,2.36452716159286,6.42247599981447,3.50800491046472,7.70157579163969,8.11619414769709,5.64131328467895,0,0,0,0.275936746304732,10.1146871692309,8.43924143463863,0,2.01976741763498,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,6.10510501201433,1.70328102249922,2.13678724400706,4.23506094319298,3.62934270539578,0,2.42780636154981,0.906970670894253,2.64047111658257,0.885905678642318,0.922305443831782,1.29214146584111,1.45413491791002,2.49548164869305,0.632073515871632,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.905510786479282,0.428674070063185,0.177340233642274,1.78368817602071,1.81003922662333,0.304464949114599,0,0.42366414172764,0.220528398054962,0,0.807322133479528,0.542816324353403,0.358117032009409,0.164140899745061,3.20628920292836,10.9400928186201,0.512612642393558,1.23832120777933,0.925972636848558,0.941842285023455,0.410082683163076,0,0,0,0,0,0.316335993581135,0.813277868507395,2.80813886136683,5.22720740036172,3.9305261474312,4.45052343069908,3.30613822901344,3.14107130380836,2.20345454596048,0.621339313086926,0,0.598066184175915,0.165458490457098,0.194451188344048,1.42075805825504,3.04121025883401,2.8165737274981,2.0832701575032,1.15345278868282,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0.649604114888975,0.179026695667481,0.198681354781265,0.480781798079875,0,0.201932899896295,0.15241361331,0.302478555410522,0.292373642219257,0.288635524920988,0.467507608726276,0.906921534460845,0,0,0,4.056981474676,2.25218970541418,2.56412273974171,1.2862102744744,1.00314420807073,24.2843292325339,14.7304075682297,18.3326564300607,8.42080593484069,7.53590771747707,21.1510291269116,16.2005400055633,14.8605997063993,20.3914084042892,18.1216109113137,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.824140228955577,0.962757628775446,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,0.832326981263301,0.746661096422973,1.42888107384922,0.927074607558844,1.73618298417335,2.06042950401653,1.76638704161277,3.42869252385415,1.59728225543404,2.14592570952589,1.59881058295561,1.31753132581463,1.35383372626682,2.0122077016005,3.94604567156764,1.22223702461276,2.24456908663095,1.06771516311757,2.46261205938909,1.22769312950907,0.77468420592983,0.771626443924566,0.499621155875892,0.701794825336225,0.859484216193193,1.3390183244819,1.10295709559758,0.695603506861264 | ||
|short_description=p@chr5:104522263..104522285,- | |||
}} | }} |
Latest revision as of 22:16, 5 August 2015
Short description: | p@chr5:104522263..104522285, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:104522263..104522285, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.72e-12 | 54 |
neural tube | 7.56e-11 | 52 |
neural rod | 7.56e-11 | 52 |
future spinal cord | 7.56e-11 | 52 |
neural keel | 7.56e-11 | 52 |
occipital lobe | 1.39e-09 | 10 |
visual cortex | 1.39e-09 | 10 |
neocortex | 1.39e-09 | 10 |
tube | 1.53e-09 | 114 |
gray matter | 2.14e-09 | 34 |
anatomical conduit | 5.52e-09 | 122 |
brain | 4.01e-08 | 47 |
future brain | 4.01e-08 | 47 |
neurectoderm | 5.70e-08 | 64 |
neural plate | 5.70e-08 | 64 |
presumptive neural plate | 5.70e-08 | 64 |
regional part of brain | 1.24e-07 | 46 |
central nervous system | 1.51e-07 | 73 |
structure with developmental contribution from neural crest | 2.65e-07 | 92 |
nervous system | 5.33e-07 | 75 |