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FFCP PHASE1:Mm9::chr4:155560324..155560388,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:155560324..155560388,-
|DHSsupport=NA
|short_description=p2@Agrn
|DPIdataset=NA
|description=CAGE_peak_2_at_Agrn_5end
|association_with_transcript=0bp_to_uc008wgg.1_5end
|EntrezGene=11603
|EntrezGene=11603
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc008wgg.1_5end
|cluster_id=chr4:155560324..155560388,-
|description=CAGE_peak_2_at_Agrn_5end
|id=chr4:155560324..155560388,-
|ontology_enrichment_celltype=CL:0000117!1.96e-13!23;CL:0000337!1.96e-13!23;CL:0000540!2.57e-12!33;CL:0000047!2.57e-12!33;CL:0000031!2.57e-12!33;CL:0000404!2.57e-12!33;CL:0000221!2.94e-11!44;CL:0000133!2.94e-11!44;CL:0002319!3.66e-11!43;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39;CL:0000055!9.61e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-15,23;CL:0000337,3.51e-15,23;CL:0000540,6.08e-13,33;CL:0000047,6.08e-13,33;CL:0000031,6.08e-13,33;CL:0000404,6.08e-13,33;CL:0000221,1.11e-11,44;CL:0000133,1.11e-11,44;CL:0002319,1.45e-11,43;CL:0000393,4.59e-09,39;CL:0000211,4.59e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.72e-27!71;UBERON:0003075!1.72e-27!71;UBERON:0007284!1.72e-27!71;UBERON:0001017!2.53e-25!73;UBERON:0005743!2.53e-25!73;UBERON:0004121!3.09e-25!102;UBERON:0000924!3.09e-25!102;UBERON:0006601!3.09e-25!102;UBERON:0000073!2.29e-24!75;UBERON:0001016!2.29e-24!75;UBERON:0003056!2.20e-23!49;UBERON:0000033!1.63e-22!63;UBERON:0001049!2.30e-21!52;UBERON:0005068!2.30e-21!52;UBERON:0006241!2.30e-21!52;UBERON:0007135!2.30e-21!52;UBERON:0000955!1.88e-19!50;UBERON:0006238!1.88e-19!50;UBERON:0002616!7.06e-19!49;UBERON:0003080!1.08e-18!40;UBERON:0002780!3.19e-18!39;UBERON:0001890!3.19e-18!39;UBERON:0006240!3.19e-18!39;UBERON:0002020!5.11e-18!34;UBERON:0002791!6.48e-15!29;UBERON:0003528!6.48e-15!29;UBERON:0001893!6.48e-15!29;UBERON:0000956!4.07e-11!21;UBERON:0001869!4.07e-11!21;UBERON:0000203!4.07e-11!21;UBERON:0007811!3.26e-09!86;UBERON:0002619!6.03e-09!17;UBERON:0000153!6.37e-09!94;UBERON:0000468!4.86e-08!333;UBERON:0000025!9.83e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.81e-29,64;UBERON:0003075,1.81e-29,64;UBERON:0007284,1.81e-29,64;UBERON:0001017,5.01e-28,73;UBERON:0001016,1.73e-26,75;UBERON:0003056,4.50e-26,49;UBERON:0000073,2.46e-25,54;UBERON:0004121,4.04e-25,95;UBERON:0000924,4.04e-25,95;UBERON:0006601,4.04e-25,95;UBERON:0001049,1.62e-24,52;UBERON:0005068,1.62e-24,52;UBERON:0006241,1.62e-24,52;UBERON:0007135,1.62e-24,52;UBERON:0010371,4.14e-24,73;UBERON:0010314,1.90e-21,92;UBERON:0000955,2.35e-21,47;UBERON:0006238,2.35e-21,47;UBERON:0003080,3.21e-21,40;UBERON:0002616,1.07e-20,46;UBERON:0002780,1.12e-20,39;UBERON:0001890,1.12e-20,39;UBERON:0006240,1.12e-20,39;UBERON:0002020,1.92e-20,34;UBERON:0003528,7.01e-17,29;UBERON:0002791,7.01e-17,29;UBERON:0001893,7.01e-17,29;UBERON:0000956,1.60e-12,21;UBERON:0001869,1.60e-12,21;UBERON:0000203,1.60e-12,21;UBERON:0002619,4.92e-10,17;UBERON:0002021,9.64e-07,10;UBERON:0000411,9.64e-07,10;UBERON:0001950,9.64e-07,10
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.97717564461025,1.36100929351998,1.67983705950435,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,29.5382032855013,30.6814767977779,27.8885817542719,0,0,0,0,0,1.49800055259202,5.76327457982332,15.5534418462716,19.3058491814318,16.4053469854078,11.9973413449598,12.8103753751936,23.0282702524114,22.2361492762308,35.8495326777908,8.8092704799511,3.44755812830007,3.07213066512487,40.7528629086299,28.0867065859398,30.2129754922921,3.35019598801657,3.37657566019008,10.5430790965999,25.0434297652618,16.3727432918968,25.9095229697168,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.11418387971906,0,1.1875371125186,5.03107447621794,6.39377504455497,3.68984795609694,5.72746034099966,5.40908052824242,1.0053327306374,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,1.25668024088073,0,0,0,0,8.38827580667007,5.49000723382352,36.3141077606178,8.51739168942155,13.0414883238469,3.94797284663164,6.97637431191358,3.66621709861139,0.373220911830279,0,0.420883711772948,11.7108398666433,20.0014830857121,20.5270827978098,20.4958552256572,30.1401691240382,26.9038812598185,26.4238863258435,6.20888089773638,1.29340795759705,2.08016688184601,1.23165786914764,1.09597866213787,0.278047249225598,0.696504333044333,1.02891068203972,2.58744546864041,0,0,0,4.14251545071004,1.17263029990548,2.52086886045421,0.473489471170421,1.57411385397923,0.617068451549513,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.536825675041487,9.46304768538573,50.8348785153665,0,0.264450566663544,3.19932375802851,1.85789337488351,2.44848176511977,2.21851877085677,2.00140239460383,0.951128130562796,0,0.988193728344065,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0,1.70701110857774,3.88444942873078,5.63538678365402,2.24016460629846,2.13347735884388,2.38461787627083,0.822074982615345,0,0.470996183524124,0.246794327843601,0,0.500535317148282,0.589676985339609,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,2.08440552947533,1.30371981153621,1.69745085775188,0.938760993154008,1.67506257441816,0.714130922658041,0.195133647857799,2.67979744980525,3.32197034473162,3.02964060449226,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,4.65596710964597,4.68846746368813,0,0,1.26203287766503,1.17131623288992,2.58508077279359,1.43381278771531,1.78238939265915,0.566153061577665,0.404810701674894,2.63030272120181,2.76701444562566,11.8888887076069,0.425820255624806,4.45164009168138,2.93196526836437,1.64970122972535,0,0.971122544619926,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,3.40439605753788,9.54323798365944,8.66703181344455,7.93047029616891,6.38424841112185,4.10248280484762,4.93647061806363,7.61162372786498,0,0,0,0.16488625294148,0,0.422190474497091,0.119372344003136,0.164140899745061,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,3.16335993581135,1.82987520414164,1.08005340821801,1.25452977608681,0.87345025498471,0.539457385539283,0.826534557253359,0,0.388844919875379,0,0,0.897099276263873,1.32366792365678,1.55560950675238,1.6790777052105,1.35164900392623,1.76035857968631,0.781226309063701,0,0,0,0,0,0.308132871494482,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,16.942555278512,18.4130094602871,21.1971339972577,14.4356673168698,8.90607275701835,11.3309084608455,10.8003600037089,4.5032120322422,6.34399372577886,7.7664046762773,3.73634451303036,20.7492934168536,14.1708892775931,6.80698807791223,3.77303692730368,4.59608771125035,6.88964856185007,7.2112270033613,9.94849549734627,8.33900798820532,8.61829619626815,6.22466926574051,5.99305647807247,7.23484222175023,7.58148190214095,5.71552429539688,7.18482820858104,7.13764115715709,4.12085900803307,6.03515572551029,8.57173130963539,6.03417740941747,5.7224685587357,7.70336008151341,6.68176600948847,7.53070010235921,8.04883080640199,6.57674278594607,6.51859746460137,9.53941861818155,6.16902094245706,6.2057823896605,4.09231043169689,5.88759996506671,6.94463799532109,25.4806789496705,8.4215379040347,10.09893954027,1.72159498861959,0.441182838239031,0.695603506861264
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.97717564461025,1.36100929351998,1.67983705950435,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,29.5382032855013,30.6814767977779,27.8885817542719,0,0,0,0,0,1.49800055259202,5.76327457982332,15.5534418462716,19.3058491814318,16.4053469854078,11.9973413449598,12.8103753751936,23.0282702524114,22.2361492762308,35.8495326777908,8.8092704799511,3.44755812830007,3.07213066512487,40.7528629086299,28.0867065859398,30.2129754922921,3.35019598801657,3.37657566019008,10.5430790965999,25.0434297652618,16.3727432918968,25.9095229697168,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.11418387971906,0,1.1875371125186,5.03107447621794,6.39377504455497,3.68984795609694,5.72746034099966,5.40908052824242,1.0053327306374,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,1.25668024088073,0,0,0,0,8.38827580667007,5.49000723382352,36.3141077606178,8.51739168942155,13.0414883238469,3.94797284663164,6.97637431191358,3.66621709861139,0.373220911830279,0,0.420883711772948,11.7108398666433,20.0014830857121,20.5270827978098,20.4958552256572,30.1401691240382,26.9038812598185,26.4238863258435,6.20888089773638,1.29340795759705,2.08016688184601,1.23165786914764,1.09597866213787,0.278047249225598,0.696504333044333,1.02891068203972,2.58744546864041,0,0,0,4.14251545071004,1.17263029990548,2.52086886045421,0.473489471170421,1.57411385397923,0.617068451549513,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.536825675041487,9.46304768538573,50.8348785153665,0,0.264450566663544,3.19932375802851,1.85789337488351,2.44848176511977,2.21851877085677,2.00140239460383,0.951128130562796,0,0.988193728344065,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0,1.70701110857774,3.88444942873078,5.63538678365402,2.24016460629846,2.13347735884388,2.38461787627083,0.822074982615345,0,0.470996183524124,0.246794327843601,0,0.500535317148282,0.589676985339609,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,2.08440552947533,1.30371981153621,1.69745085775188,0.938760993154008,1.67506257441816,0.714130922658041,0.195133647857799,2.67979744980525,3.32197034473162,3.02964060449226,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,4.65596710964597,4.68846746368813,0,0,1.26203287766503,1.17131623288992,2.58508077279359,1.43381278771531,1.78238939265915,0.566153061577665,0.404810701674894,2.63030272120181,2.76701444562566,11.8888887076069,0.425820255624806,4.45164009168138,2.93196526836437,1.64970122972535,0,0.971122544619926,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,3.40439605753788,9.54323798365944,8.66703181344455,7.93047029616891,6.38424841112185,4.10248280484762,4.93647061806363,7.61162372786498,0,0,0,0.16488625294148,0,0.422190474497091,0.119372344003136,0.164140899745061,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,3.16335993581135,1.82987520414164,1.08005340821801,1.25452977608681,0.87345025498471,0.539457385539283,0.826534557253359,0,0.388844919875379,0,0,0.897099276263873,1.32366792365678,1.55560950675238,1.6790777052105,1.35164900392623,1.76035857968631,0.781226309063701,0,0,0,0,0,0.308132871494482,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,16.942555278512,18.4130094602871,21.1971339972577,14.4356673168698,8.90607275701835,11.3309084608455,10.8003600037089,4.5032120322422,6.34399372577886,7.7664046762773,3.73634451303036,20.7492934168536,14.1708892775931,6.80698807791223,3.77303692730368,4.59608771125035,6.88964856185007,7.2112270033613,9.94849549734627,8.33900798820532,8.61829619626815,6.22466926574051,5.99305647807247,7.23484222175023,7.58148190214095,5.71552429539688,7.18482820858104,7.13764115715709,4.12085900803307,6.03515572551029,8.57173130963539,6.03417740941747,5.7224685587357,7.70336008151341,6.68176600948847,7.53070010235921,8.04883080640199,6.57674278594607,6.51859746460137,9.53941861818155,6.16902094245706,6.2057823896605,4.09231043169689,5.88759996506671,6.94463799532109,25.4806789496705,8.4215379040347,10.09893954027,1.72159498861959,0.441182838239031,0.695603506861264
|short_description=p2@Agrn
}}
}}

Latest revision as of 20:41, 26 September 2015

Short description:p2@Agrn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Agrn_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_uc008wgg.1_5end
EntrezGene:Agrn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Agrn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C329.54
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.55
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.03
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D635.85
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F136.31
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C611.71
eyeball, embryo E14.CNhs10521.399-16E220.00
eyeball, embryo E15.CNhs10593.426-16C920.53
eyeball, embryo E17.CNhs11023.1261-18D420.50
eyeball, neonate N00.CNhs11207.633-15C630.14
eyeball, neonate N01.CNhs11140.1532-43E726.90
eyeball, neonate N02.CNhs11205.1551-44G826.42
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G150.83
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H214.17
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.51e-1523
neuroblast (sensu Vertebrata)3.51e-1523
neuron6.08e-1333
neuronal stem cell6.08e-1333
neuroblast6.08e-1333
electrically signaling cell6.08e-1333
ectodermal cell1.11e-1144
neurectodermal cell1.11e-1144
neural cell1.45e-1143
electrically responsive cell4.59e-0939
electrically active cell4.59e-0939

Uber anatomy
Ontology termp-valuen
neurectoderm1.81e-2964
neural plate1.81e-2964
presumptive neural plate1.81e-2964
central nervous system5.01e-2873
nervous system1.73e-2675
pre-chordal neural plate4.50e-2649
regional part of nervous system2.46e-2554
ectoderm-derived structure4.04e-2595
ectoderm4.04e-2595
presumptive ectoderm4.04e-2595
neural tube1.62e-2452
neural rod1.62e-2452
future spinal cord1.62e-2452
neural keel1.62e-2452
ecto-epithelium4.14e-2473
structure with developmental contribution from neural crest1.90e-2192
brain2.35e-2147
future brain2.35e-2147
anterior neural tube3.21e-2140
regional part of brain1.07e-2046
regional part of forebrain1.12e-2039
forebrain1.12e-2039
future forebrain1.12e-2039
gray matter1.92e-2034
brain grey matter7.01e-1729
regional part of telencephalon7.01e-1729
telencephalon7.01e-1729
cerebral cortex1.60e-1221
cerebral hemisphere1.60e-1221
pallium1.60e-1221
regional part of cerebral cortex4.92e-1017
occipital lobe9.64e-0710
visual cortex9.64e-0710
neocortex9.64e-0710
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