FFCP PHASE1:Mm9::chr4:140766527..140766550,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr4:140766527..140766550,+ to FFCP PHASE1:Mm9::chr4:140766527..140766550,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:140766527..140766550,+ | |||
|description=CAGE_peak_at_chr4:140766527..140766550,+ | |||
|id=chr4:140766527..140766550,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.30e-14!32;CL:0002032!9.30e-14!32;CL:0000037!9.30e-14!32;CL:0000566!9.30e-14!32;CL:0000837!9.30e-14!32;CL:0000838!3.99e-12!12;CL:0000791!2.58e-11!9;CL:0000789!2.58e-11!9;CL:0002420!2.58e-11!9;CL:0002419!2.58e-11!9;CL:0000790!2.58e-11!9;CL:0000542!6.13e-11!13;CL:0000051!6.13e-11!13;CL:0000084!6.45e-11!11;CL:0000827!6.45e-11!11;CL:0002031!2.39e-10!25;CL:0000624!5.01e-10!8;CL:0002320!1.65e-08!46;CL:0000134!1.65e-08!46;CL:0000738!1.27e-07!17;CL:0002087!1.27e-07!17;CL:0000893!1.51e-07!6;CL:0002489!1.51e-07!6;CL:0000898!1.51e-07!6;CL:0000809!1.51e-07!6;CL:0000810!1.51e-07!6;CL:0000895!1.51e-07!6;CL:0000808!1.51e-07!6;CL:0000894!1.51e-07!6;CL:0000806!1.51e-07!6;CL:0000807!1.51e-07!6;CL:0000805!1.51e-07!6;CL:0002425!1.51e-07!6;CL:0002436!1.51e-07!6;CL:0002427!1.51e-07!6;CL:0002428!1.51e-07!6;CL:0002429!1.51e-07!6;CL:0002433!1.51e-07!6;CL:0002431!1.51e-07!6;CL:0002432!1.51e-07!6;CL:0000063!3.81e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.27e-14,12;CL:0000791,3.59e-13,9;CL:0000789,3.59e-13,9;CL:0002420,3.59e-13,9;CL:0002419,3.59e-13,9;CL:0000790,3.59e-13,9;CL:0000988,4.88e-13,32;CL:0002032,4.88e-13,32;CL:0000037,4.88e-13,32;CL:0000837,4.88e-13,32;CL:0000542,9.15e-13,13;CL:0000051,9.15e-13,13;CL:0002031,4.61e-11,25;CL:0000084,9.48e-11,11;CL:0000827,9.48e-11,11;CL:0000624,1.03e-09,8;CL:0000738,1.18e-09,17;CL:0002087,1.18e-09,17;CL:0002320,1.25e-08,46;CL:0000134,1.25e-08,46;CL:0000034,1.63e-08,97;CL:0000219,3.92e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.14e-15,3;DOID:4045,2.14e-15,3;DOID:0050686,6.10e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.69e-10!45;UBERON:0003061!3.69e-10!45;UBERON:0002193!4.37e-09!48;UBERON:0002370!4.49e-09!23;UBERON:0000974!4.49e-09!23;UBERON:0004807!4.49e-09!23;UBERON:0005058!4.49e-09!23;UBERON:0003351!4.49e-09!23;UBERON:0009113!4.49e-09!23;UBERON:0003295!4.49e-09!23;UBERON:0009722!4.49e-09!23;UBERON:0005562!4.49e-09!23;UBERON:0007690!4.49e-09!23;UBERON:0006562!1.61e-08!24;UBERON:0003408!1.61e-08!24;UBERON:0001557!1.61e-08!24;UBERON:0001042!1.61e-08!24;UBERON:0008814!1.61e-08!24;UBERON:0009145!1.61e-08!24;UBERON:0002384!1.65e-08!46;UBERON:0004177!2.42e-08!29;UBERON:0000072!4.11e-07!27;UBERON:0000063!4.59e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-08,46 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,1.42035655785734,3.37892933164,0.468129052643987,0.856089841127525,0.0797721589953364,6.16322627752341,0.874204024189974,0,0.404950534779652,0.699561878128147,1.57731082679119,0.959801035240171,1.27316895539409,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,7.53356935326434,7.813353445238,3.66466620781659,39.411509698078,19.1252735788365,6.311634589405,0,0,0,0,0,0,0,0,0,3.18786951509699,7.25362142011344,6.72187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0.599075622529601,1.19980546198682,0.889491589511453,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,1.01987057996313,1.53946597556024,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0.194915761479505,0.673482891482306,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,1.42035655785734,3.37892933164,0.468129052643987,0.856089841127525,0.0797721589953364,6.16322627752341,0.874204024189974,0,0.404950534779652,0.699561878128147,1.57731082679119,0.959801035240171,1.27316895539409,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,7.53356935326434,7.813353445238,3.66466620781659,39.411509698078,19.1252735788365,6.311634589405,0,0,0,0,0,0,0,0,0,3.18786951509699,7.25362142011344,6.72187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0.599075622529601,1.19980546198682,0.889491589511453,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,1.01987057996313,1.53946597556024,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0.194915761479505,0.673482891482306,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr4:140766527..140766550,+ | |||
}} | }} |
Latest revision as of 02:07, 5 August 2015
Short description: | p@chr4:140766527..140766550, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:140766527..140766550, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.27e-14 | 12 |
mature alpha-beta T cell | 3.59e-13 | 9 |
alpha-beta T cell | 3.59e-13 | 9 |
immature T cell | 3.59e-13 | 9 |
mature T cell | 3.59e-13 | 9 |
immature alpha-beta T cell | 3.59e-13 | 9 |
hematopoietic cell | 4.88e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.88e-13 | 32 |
hematopoietic stem cell | 4.88e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.88e-13 | 32 |
lymphocyte | 9.15e-13 | 13 |
common lymphoid progenitor | 9.15e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 4.61e-11 | 25 |
T cell | 9.48e-11 | 11 |
pro-T cell | 9.48e-11 | 11 |
CD4-positive, alpha-beta T cell | 1.03e-09 | 8 |
leukocyte | 1.18e-09 | 17 |
nongranular leukocyte | 1.18e-09 | 17 |
connective tissue cell | 1.25e-08 | 46 |
mesenchymal cell | 1.25e-08 | 46 |
stem cell | 1.63e-08 | 97 |
motile cell | 3.92e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.25e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.14e-15 | 3 |
muscle cancer | 2.14e-15 | 3 |
organ system cancer | 6.10e-08 | 6 |