FFCP PHASE1:Mm9::chr4:130372788..130372826,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:130372788..130372826,+ to FFCP PHASE1:Mm9::chr4:130372788..130372826,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20970 | |EntrezGene=20970 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1087 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENSMUST00000140623_5end | |||
|cluster_id=chr4:130372788..130372826,+ | |||
|description=CAGE_peak_4_at_Sdc3_5end | |||
|id=chr4:130372788..130372826,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0000055!1.02e-12!50;CL:0000393!2.24e-12!39;CL:0000211!2.24e-12!39;CL:0000540!3.83e-11!33;CL:0000047!3.83e-11!33;CL:0000031!3.83e-11!33;CL:0000404!3.83e-11!33;CL:0002319!5.24e-11!43;CL:0000221!1.11e-10!44;CL:0000133!1.11e-10!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.44e-19,23;CL:0000337,2.44e-19,23;CL:0000393,7.42e-16,39;CL:0000211,7.42e-16,39;CL:0000540,2.17e-14,33;CL:0000047,2.17e-14,33;CL:0000031,2.17e-14,33;CL:0000404,2.17e-14,33;CL:0002319,1.16e-13,43;CL:0000221,3.94e-13,44;CL:0000133,3.94e-13,44;CL:0000723,1.39e-08,91;CL:0000048,1.39e-08,91;CL:0002321,3.38e-08,70;CL:0000034,2.47e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.24e-20!75;UBERON:0001016!3.24e-20!75;UBERON:0001017!2.01e-19!73;UBERON:0005743!2.01e-19!73;UBERON:0004121!2.94e-18!102;UBERON:0000924!2.94e-18!102;UBERON:0006601!2.94e-18!102;UBERON:0002346!6.16e-18!71;UBERON:0003075!6.16e-18!71;UBERON:0007284!6.16e-18!71;UBERON:0001049!3.45e-16!52;UBERON:0005068!3.45e-16!52;UBERON:0006241!3.45e-16!52;UBERON:0007135!3.45e-16!52;UBERON:0002020!1.43e-15!34;UBERON:0000955!1.56e-14!50;UBERON:0006238!1.56e-14!50;UBERON:0002616!4.93e-14!49;UBERON:0002791!2.15e-12!29;UBERON:0003528!2.15e-12!29;UBERON:0001893!2.15e-12!29;UBERON:0000033!3.29e-12!63;UBERON:0003080!3.33e-11!40;UBERON:0003056!5.29e-11!49;UBERON:0002780!8.39e-11!39;UBERON:0001890!8.39e-11!39;UBERON:0006240!8.39e-11!39;UBERON:0000025!1.07e-08!114;UBERON:0000956!2.46e-08!21;UBERON:0001869!2.46e-08!21;UBERON:0000203!2.46e-08!21;UBERON:0004111!2.47e-07!122;UBERON:0002021!5.55e-07!10;UBERON:0000411!5.55e-07!10;UBERON:0001950!5.55e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-25,75;UBERON:0001017,2.70e-24,73;UBERON:0002020,8.13e-23,34;UBERON:0000073,1.07e-21,54;UBERON:0001049,3.00e-20,52;UBERON:0005068,3.00e-20,52;UBERON:0006241,3.00e-20,52;UBERON:0007135,3.00e-20,52;UBERON:0003528,1.14e-17,29;UBERON:0002791,1.14e-17,29;UBERON:0001893,1.14e-17,29;UBERON:0004121,2.90e-17,95;UBERON:0000924,2.90e-17,95;UBERON:0006601,2.90e-17,95;UBERON:0002346,1.09e-15,64;UBERON:0003075,1.09e-15,64;UBERON:0007284,1.09e-15,64;UBERON:0000955,1.21e-15,47;UBERON:0006238,1.21e-15,47;UBERON:0002616,6.58e-15,46;UBERON:0003080,6.33e-14,40;UBERON:0002780,2.64e-13,39;UBERON:0001890,2.64e-13,39;UBERON:0006240,2.64e-13,39;UBERON:0010314,2.66e-13,92;UBERON:0010371,3.58e-12,73;UBERON:0000956,3.92e-11,21;UBERON:0001869,3.92e-11,21;UBERON:0000203,3.92e-11,21;UBERON:0002021,1.63e-10,10;UBERON:0000411,1.63e-10,10;UBERON:0001950,1.63e-10,10;UBERON:0003056,1.96e-10,49;UBERON:0002619,2.30e-08,17;UBERON:0002420,4.80e-08,8;UBERON:0007245,4.80e-08,8;UBERON:0010009,4.80e-08,8;UBERON:0010011,4.80e-08,8;UBERON:0000454,4.80e-08,8;UBERON:0000025,1.58e-07,114;UBERON:0002240,2.08e-07,6;UBERON:0005174,2.08e-07,6;UBERON:0001137,2.08e-07,6;UBERON:0003076,3.19e-07,12;UBERON:0003057,3.19e-07,12 | |||
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| ||
|short_description=p4@Sdc3 | |||
}} | }} |
Latest revision as of 10:09, 26 September 2015
Short description: | p4@Sdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sdc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1087 |
Association with transcript: | 28bp_to_ENSMUST00000140623_5end |
EntrezGene: | Sdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.44e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.44e-19 | 23 |
electrically responsive cell | 7.42e-16 | 39 |
electrically active cell | 7.42e-16 | 39 |
neuron | 2.17e-14 | 33 |
neuronal stem cell | 2.17e-14 | 33 |
neuroblast | 2.17e-14 | 33 |
electrically signaling cell | 2.17e-14 | 33 |
neural cell | 1.16e-13 | 43 |
ectodermal cell | 3.94e-13 | 44 |
neurectodermal cell | 3.94e-13 | 44 |
somatic stem cell | 1.39e-08 | 91 |
multi fate stem cell | 1.39e-08 | 91 |
embryonic cell | 3.38e-08 | 70 |
stem cell | 2.47e-07 | 97 |