FFCP PHASE1:Mm9::chr4:116666959..116666977,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:116666959..116666977,- to FFCP PHASE1:Mm9::chr4:116666959..116666977,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22275 | |EntrezGene=22275 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=F2Z495 | |UniProt=F2Z495 | ||
|association_with_transcript=0bp_to_ENSMUST00000130273,ENSMUST00000135164_5end | |||
|cluster_id=chr4:116666959..116666977,- | |||
|description=CAGE_peak_1_at_Urod_5end | |||
|id=chr4:116666959..116666977,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.31e-16!49;UBERON:0005173!1.31e-16!49;UBERON:0002417!1.31e-16!49;UBERON:0000916!1.31e-16!49;UBERON:0002107!4.75e-12!22;UBERON:0007499!4.75e-12!22;UBERON:0006925!4.75e-12!22;UBERON:0009497!4.75e-12!22;UBERON:0000015!4.75e-12!22;UBERON:0002423!4.75e-12!22;UBERON:0006235!4.75e-12!22;UBERON:0008835!4.75e-12!22;UBERON:0003894!4.75e-12!22;UBERON:0004161!4.75e-12!22;UBERON:0008836!4.75e-12!22;UBERON:0002365!1.20e-11!25;UBERON:0002330!1.20e-11!25;UBERON:0009854!1.48e-11!23;UBERON:0009856!1.48e-11!23;UBERON:0009569!8.38e-11!66;UBERON:0003914!1.10e-10!47;UBERON:0005256!4.80e-08!47;UBERON:0005177!1.06e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.31e-16,49;UBERON:0005173,1.31e-16,49;UBERON:0002417,1.31e-16,49;UBERON:0000916,1.31e-16,49;UBERON:0002107,4.75e-12,22;UBERON:0007499,4.75e-12,22;UBERON:0006925,4.75e-12,22;UBERON:0009497,4.75e-12,22;UBERON:0000015,4.75e-12,22;UBERON:0002423,4.75e-12,22;UBERON:0006235,4.75e-12,22;UBERON:0008835,4.75e-12,22;UBERON:0003894,4.75e-12,22;UBERON:0004161,4.75e-12,22;UBERON:0008836,4.75e-12,22;UBERON:0002365,1.20e-11,25;UBERON:0002330,1.20e-11,25;UBERON:0009854,1.48e-11,23;UBERON:0009856,1.48e-11,23;UBERON:0009569,8.38e-11,66;UBERON:0003914,1.10e-10,47;UBERON:0005177,2.10e-09,79;UBERON:0003104,2.21e-09,61;UBERON:0009142,2.21e-09,61;UBERON:0005256,9.30e-09,45;UBERON:0002100,9.48e-07,90 | |||
|phase1_expression=20.8193501236232,17.0997949743287,11.8299802241279,12.0985684522732,10.5188103288733,12.0873075776561,12.8486952327539,22.854828249159,4.92760527530834,3.5109678948299,5.47897498321616,5.74359544766422,18.1472773727078,22.0299414095873,199.199637565766,290.147058169621,427.432307536298,20.6627718309646,19.7444784392264,33.5267824920444,22.0262121491271,30.6809039210736,20.6347833419759,21.9189619226967,25.4644301984559,23.5435105287158,18.9535278309993,21.7625945012748,26.413255304436,18.6502296022349,16.1863272778372,104.780061120839,143.925160294789,63.3926724061755,32.640233031894,34.9092755252834,29.4003873017812,25.1118978442145,23.440060335714,23.0350447348471,29.4115744015507,12.9778642142105,21.8479658864019,12.5896817975577,12.1652317463417,13.5824596599644,28.9484797408774,25.2909181401318,35.8088477857189,43.5522973926395,23.2377459898102,33.0630898039435,11.4092172119261,11.6057942721815,10.4189077734164,14.9210472900849,17.4785398362642,27.8462929829819,9.5088736604011,10.0508286061686,10.1413024560989,18.9752937958714,19.5644855144451,14.3983954765024,22.7439263390404,17.7620028736525,14.081205194365,32.6585559523321,16.6940275816649,15.1206650931494,15.7743721013537,20.5668708770739,19.8781686856452,13.9639511105048,17.443875725319,14.7075005857603,13.2139057199266,23.8775322219301,26.1131106535614,8.44072241473241,9.33173964744578,7.29278718779464,32.943593882163,28.138130501584,25.0589126353969,13.8475435172624,14.2371680799103,14.7255562201987,11.8890123533099,17.2303157043471,17.102004833399,83.4611160671945,61.8773913674053,79.8760723623969,67.5767474145576,62.723764193627,62.2168781183661,12.9527045159324,12.7295142255406,15.546941278455,20.5631392873954,5.13305909657271,2.54805239706646,0,14.9378818297738,11.9079136773296,19.2099289105618,44.4175292107143,34.1798006414267,33.1025970114559,40.0751104829774,37.4492538323934,44.5087909704193,42.2023393547343,35.6293782621186,37.951310581562,17.5508427091405,46.4163935712916,80.4995602274386,44.3241168855901,92.0909131979841,100.369177398991,24.2309289583559,31.6203260772471,30.9981126083913,21.2029355823131,13.1796636956512,31.1949420116572,13.3423738426718,30.2577091597742,31.1100409916666,8.04187853522332,24.509229147111,16.8772201838018,31.7915708176127,30.0146336675352,19.4513184954104,94.3004837224505,102.858162682506,263.262761713979,21.079511759958,27.5882525320167,20.3470206680045,25.4691142142358,19.3223657589771,21.7793324484245,23.8002380381711,96.2376539149138,35.3531508409861,26.6639573036625,25.3369618796086,24.3307262994608,16.6828349535359,20.5468778248078,15.0220959577799,24.6802490854932,28.0885274925294,30.1097051324217,22.7330799516474,40.1823998718874,34.0062786972589,27.5494954035353,34.5647313954407,29.1211062986158,28.2308816583902,28.1366073147993,24.1446061259657,36.8978481880256,32.0891707331287,36.4451770255591,39.4805102488317,44.5909961647264,40.3972212135533,49.7905813600979,27.7582732104648,11.936935035997,24.7814087237848,22.4782981664013,23.8882840599462,21.8302471548812,16.3661675879059,14.9245808221273,25.1287189544703,23.9684288901825,21.8283368310475,35.5749742203864,21.6148279568232,21.8852119245266,21.2510854959841,12.5834717211591,24.8558757355898,31.8626037206988,23.5188197181821,26.7341519506765,25.9227792048085,22.4016460629846,20.1710586654331,22.5837340046826,24.4725398670876,33.5075035913697,42.5466552450126,51.5800145193126,92.7896722782776,183.362771181987,217.394248595203,256.567670231118,275.484044845587,313.047953358637,260.482246372392,154.492825811085,100.361705373747,122.454390281884,70.4464211984037,57.3097059409495,56.4788188337355,73.5004534826095,68.3504145518485,65.6123189054179,22.7246423904924,28.0447289420317,26.0743962307241,18.8417045210459,16.1936271319066,23.7858885567378,23.8043640886014,28.4895125872386,23.6452716159286,19.9318220683897,19.7723913135284,26.2181303545181,22.9671025881641,28.6405135991393,16.5870412333199,15.7732648307426,26.555270743028,27.0418011378638,40.4587486769236,37.2733163363206,21.4754778443445,47.4645343144221,16.0909191902291,20.3028147034252,17.2338718186239,17.4447222505363,14.4819138153556,12.7384438854975,19.4309136803949,18.9966307642353,15.8115111178609,24.7417413644791,26.1169756783214,29.7369558124316,24.9217047810971,25.570369060743,23.8941249011933,27.9197731578229,27.2091201268276,16.0314317792513,29.2348873951965,26.1319875752338,20.9326917466259,23.9932261455154,21.3898427030833,25.2829406348653,16.8669773719998,41.2542172992747,37.4483566329167,26.2889197285713,36.9965835618678,31.5075441496441,33.8719846256743,31.7496495331686,25.3405491727266,35.0134691481789,19.9470951854154,15.8874053147865,28.8892201452,21.4352128823924,13.8859406958479,14.3544761329011,15.0409153443952,9.52017218521355,26.5247561333164,32.6348531538497,154.467276241259,46.0242715557986,89.8193457743102,299.317478180454,193.148943769809,231.752289458207,17.677756719361,15.6745626602497,14.3727972756601,37.2321541025894,27.2048954479776,26.2282112593635,17.2808545314882,13.5907392409405,13.1017538247707,18.3415511083356,20.91132429851,26.9608620243551,27.4783743378601,32.9309835936071,7.89170114157866,25.4178128274764,36.0699509196473,28.0009711215429,27.2527227538013,26.1881994510706,25.9359497407116,20.3118840356562,19.0844006854794,10.6297013163443,13.8254403003775,24.6488674089979,24.9352014806902,23.4180982335806,22.2164607292029,23.4524971324401,26.0272574763457,23.4381126563939,22.5964976577103,27.4628743858962,22.785835189845,25.5090248396207,19.4915761479505,25.5923498763276,28.4010872301213,31.062062555284,9.32341004171072,13.7262200612498,10.5767308309369,26.8533535704745,22.5218970541418,17.948859178192,17.1494703263253,44.6399172591473,17.5073071211291,9.66682996665071,14.8952833494243,8.59265911718438,17.8121455140367,16.6186657425734,17.550585006027,22.9663813644352,21.7508356312418,13.4617681055473,19.5120213458252,23.9414924040619,55.1469546585853,59.8042523988003,58.0628460479511,31.8049269618524,41.1156446432988,34.6138896161342,29.524567282447,39.1680678233886,35.994060584414,37.9138946186013,26.6878296289165,32.3967271168639,35.9546035662139,37.6272016113628,33.4905701980632,36.2669334471765,35.4393874690844,46.5148587624696,32.9154482289999,32.4780725271588,30.0429599333624,32.4122509090093,34.8204707536723,32.9996970777538,33.1099630899718,40.7758052728656,36.8029148522285,48.2582353625655,34.1668852197622,34.4765688314472,38.0584870147811,29.1281261429616,31.443777589926,17.9863616115321,30.1771774894577,24.495300161506,27.3542314858446,39.9270468606323,46.1416992884639 | |phase1_expression=20.8193501236232,17.0997949743287,11.8299802241279,12.0985684522732,10.5188103288733,12.0873075776561,12.8486952327539,22.854828249159,4.92760527530834,3.5109678948299,5.47897498321616,5.74359544766422,18.1472773727078,22.0299414095873,199.199637565766,290.147058169621,427.432307536298,20.6627718309646,19.7444784392264,33.5267824920444,22.0262121491271,30.6809039210736,20.6347833419759,21.9189619226967,25.4644301984559,23.5435105287158,18.9535278309993,21.7625945012748,26.413255304436,18.6502296022349,16.1863272778372,104.780061120839,143.925160294789,63.3926724061755,32.640233031894,34.9092755252834,29.4003873017812,25.1118978442145,23.440060335714,23.0350447348471,29.4115744015507,12.9778642142105,21.8479658864019,12.5896817975577,12.1652317463417,13.5824596599644,28.9484797408774,25.2909181401318,35.8088477857189,43.5522973926395,23.2377459898102,33.0630898039435,11.4092172119261,11.6057942721815,10.4189077734164,14.9210472900849,17.4785398362642,27.8462929829819,9.5088736604011,10.0508286061686,10.1413024560989,18.9752937958714,19.5644855144451,14.3983954765024,22.7439263390404,17.7620028736525,14.081205194365,32.6585559523321,16.6940275816649,15.1206650931494,15.7743721013537,20.5668708770739,19.8781686856452,13.9639511105048,17.443875725319,14.7075005857603,13.2139057199266,23.8775322219301,26.1131106535614,8.44072241473241,9.33173964744578,7.29278718779464,32.943593882163,28.138130501584,25.0589126353969,13.8475435172624,14.2371680799103,14.7255562201987,11.8890123533099,17.2303157043471,17.102004833399,83.4611160671945,61.8773913674053,79.8760723623969,67.5767474145576,62.723764193627,62.2168781183661,12.9527045159324,12.7295142255406,15.546941278455,20.5631392873954,5.13305909657271,2.54805239706646,0,14.9378818297738,11.9079136773296,19.2099289105618,44.4175292107143,34.1798006414267,33.1025970114559,40.0751104829774,37.4492538323934,44.5087909704193,42.2023393547343,35.6293782621186,37.951310581562,17.5508427091405,46.4163935712916,80.4995602274386,44.3241168855901,92.0909131979841,100.369177398991,24.2309289583559,31.6203260772471,30.9981126083913,21.2029355823131,13.1796636956512,31.1949420116572,13.3423738426718,30.2577091597742,31.1100409916666,8.04187853522332,24.509229147111,16.8772201838018,31.7915708176127,30.0146336675352,19.4513184954104,94.3004837224505,102.858162682506,263.262761713979,21.079511759958,27.5882525320167,20.3470206680045,25.4691142142358,19.3223657589771,21.7793324484245,23.8002380381711,96.2376539149138,35.3531508409861,26.6639573036625,25.3369618796086,24.3307262994608,16.6828349535359,20.5468778248078,15.0220959577799,24.6802490854932,28.0885274925294,30.1097051324217,22.7330799516474,40.1823998718874,34.0062786972589,27.5494954035353,34.5647313954407,29.1211062986158,28.2308816583902,28.1366073147993,24.1446061259657,36.8978481880256,32.0891707331287,36.4451770255591,39.4805102488317,44.5909961647264,40.3972212135533,49.7905813600979,27.7582732104648,11.936935035997,24.7814087237848,22.4782981664013,23.8882840599462,21.8302471548812,16.3661675879059,14.9245808221273,25.1287189544703,23.9684288901825,21.8283368310475,35.5749742203864,21.6148279568232,21.8852119245266,21.2510854959841,12.5834717211591,24.8558757355898,31.8626037206988,23.5188197181821,26.7341519506765,25.9227792048085,22.4016460629846,20.1710586654331,22.5837340046826,24.4725398670876,33.5075035913697,42.5466552450126,51.5800145193126,92.7896722782776,183.362771181987,217.394248595203,256.567670231118,275.484044845587,313.047953358637,260.482246372392,154.492825811085,100.361705373747,122.454390281884,70.4464211984037,57.3097059409495,56.4788188337355,73.5004534826095,68.3504145518485,65.6123189054179,22.7246423904924,28.0447289420317,26.0743962307241,18.8417045210459,16.1936271319066,23.7858885567378,23.8043640886014,28.4895125872386,23.6452716159286,19.9318220683897,19.7723913135284,26.2181303545181,22.9671025881641,28.6405135991393,16.5870412333199,15.7732648307426,26.555270743028,27.0418011378638,40.4587486769236,37.2733163363206,21.4754778443445,47.4645343144221,16.0909191902291,20.3028147034252,17.2338718186239,17.4447222505363,14.4819138153556,12.7384438854975,19.4309136803949,18.9966307642353,15.8115111178609,24.7417413644791,26.1169756783214,29.7369558124316,24.9217047810971,25.570369060743,23.8941249011933,27.9197731578229,27.2091201268276,16.0314317792513,29.2348873951965,26.1319875752338,20.9326917466259,23.9932261455154,21.3898427030833,25.2829406348653,16.8669773719998,41.2542172992747,37.4483566329167,26.2889197285713,36.9965835618678,31.5075441496441,33.8719846256743,31.7496495331686,25.3405491727266,35.0134691481789,19.9470951854154,15.8874053147865,28.8892201452,21.4352128823924,13.8859406958479,14.3544761329011,15.0409153443952,9.52017218521355,26.5247561333164,32.6348531538497,154.467276241259,46.0242715557986,89.8193457743102,299.317478180454,193.148943769809,231.752289458207,17.677756719361,15.6745626602497,14.3727972756601,37.2321541025894,27.2048954479776,26.2282112593635,17.2808545314882,13.5907392409405,13.1017538247707,18.3415511083356,20.91132429851,26.9608620243551,27.4783743378601,32.9309835936071,7.89170114157866,25.4178128274764,36.0699509196473,28.0009711215429,27.2527227538013,26.1881994510706,25.9359497407116,20.3118840356562,19.0844006854794,10.6297013163443,13.8254403003775,24.6488674089979,24.9352014806902,23.4180982335806,22.2164607292029,23.4524971324401,26.0272574763457,23.4381126563939,22.5964976577103,27.4628743858962,22.785835189845,25.5090248396207,19.4915761479505,25.5923498763276,28.4010872301213,31.062062555284,9.32341004171072,13.7262200612498,10.5767308309369,26.8533535704745,22.5218970541418,17.948859178192,17.1494703263253,44.6399172591473,17.5073071211291,9.66682996665071,14.8952833494243,8.59265911718438,17.8121455140367,16.6186657425734,17.550585006027,22.9663813644352,21.7508356312418,13.4617681055473,19.5120213458252,23.9414924040619,55.1469546585853,59.8042523988003,58.0628460479511,31.8049269618524,41.1156446432988,34.6138896161342,29.524567282447,39.1680678233886,35.994060584414,37.9138946186013,26.6878296289165,32.3967271168639,35.9546035662139,37.6272016113628,33.4905701980632,36.2669334471765,35.4393874690844,46.5148587624696,32.9154482289999,32.4780725271588,30.0429599333624,32.4122509090093,34.8204707536723,32.9996970777538,33.1099630899718,40.7758052728656,36.8029148522285,48.2582353625655,34.1668852197622,34.4765688314472,38.0584870147811,29.1281261429616,31.443777589926,17.9863616115321,30.1771774894577,24.495300161506,27.3542314858446,39.9270468606323,46.1416992884639 | ||
|short_description=p1@Urod | |||
}} | }} |
Latest revision as of 05:26, 26 September 2015
Short description: | p1@Urod |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Urod_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000130273, ENSMUST00000135164_5end |
EntrezGene: | Urod |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.31e-16 | 49 |
abdominal segment element | 1.31e-16 | 49 |
abdominal segment of trunk | 1.31e-16 | 49 |
abdomen | 1.31e-16 | 49 |
liver | 4.75e-12 | 22 |
epithelial sac | 4.75e-12 | 22 |
digestive gland | 4.75e-12 | 22 |
epithelium of foregut-midgut junction | 4.75e-12 | 22 |
anatomical boundary | 4.75e-12 | 22 |
hepatobiliary system | 4.75e-12 | 22 |
foregut-midgut junction | 4.75e-12 | 22 |
hepatic diverticulum | 4.75e-12 | 22 |
liver primordium | 4.75e-12 | 22 |
septum transversum | 4.75e-12 | 22 |
liver bud | 4.75e-12 | 22 |
exocrine gland | 1.20e-11 | 25 |
exocrine system | 1.20e-11 | 25 |
digestive tract diverticulum | 1.48e-11 | 23 |
sac | 1.48e-11 | 23 |
subdivision of trunk | 8.38e-11 | 66 |
epithelial tube | 1.10e-10 | 47 |
trunk region element | 2.10e-09 | 79 |
mesenchyme | 2.21e-09 | 61 |
entire embryonic mesenchyme | 2.21e-09 | 61 |
trunk mesenchyme | 9.30e-09 | 45 |
trunk | 9.48e-07 | 90 |