FFCP PHASE1:Mm9::chr4:115894195..115894220,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:115894195..115894220,+ to FFCP PHASE1:Mm9::chr4:115894195..115894220,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18710 | |EntrezGene=18710 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=B1AUF8 | |UniProt=B1AUF8 | ||
|association_with_transcript=-2bp_to_ENSMUST00000147292_5end | |||
|cluster_id=chr4:115894195..115894220,+ | |||
|description=CAGE_peak_2_at_Pik3r3_5end | |||
|id=chr4:115894195..115894220,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.68e-09!23;CL:0000337!4.68e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-09,23;CL:0000337,2.45e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.39e-17!63;UBERON:0002346!4.20e-15!71;UBERON:0003075!4.20e-15!71;UBERON:0007284!4.20e-15!71;UBERON:0000955!1.44e-14!50;UBERON:0006238!1.44e-14!50;UBERON:0003056!2.23e-14!49;UBERON:0004121!2.99e-14!102;UBERON:0000924!2.99e-14!102;UBERON:0006601!2.99e-14!102;UBERON:0002616!6.08e-14!49;UBERON:0001049!6.12e-14!52;UBERON:0005068!6.12e-14!52;UBERON:0006241!6.12e-14!52;UBERON:0007135!6.12e-14!52;UBERON:0002020!1.32e-11!34;UBERON:0003080!1.34e-11!40;UBERON:0007811!1.58e-11!86;UBERON:0001017!2.47e-11!73;UBERON:0005743!2.47e-11!73;UBERON:0002780!4.60e-11!39;UBERON:0001890!4.60e-11!39;UBERON:0006240!4.60e-11!39;UBERON:0000073!1.04e-10!75;UBERON:0001016!1.04e-10!75;UBERON:0002791!1.32e-10!29;UBERON:0003528!1.32e-10!29;UBERON:0001893!1.32e-10!29;UBERON:0000153!4.79e-10!94;UBERON:0000956!2.85e-07!21;UBERON:0001869!2.85e-07!21;UBERON:0000203!2.85e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.92e-15,54;UBERON:0002346,5.19e-15,64;UBERON:0003075,5.19e-15,64;UBERON:0007284,5.19e-15,64;UBERON:0010371,1.26e-14,73;UBERON:0003056,1.94e-14,49;UBERON:0001049,6.08e-14,52;UBERON:0005068,6.08e-14,52;UBERON:0006241,6.08e-14,52;UBERON:0007135,6.08e-14,52;UBERON:0004121,8.63e-14,95;UBERON:0000924,8.63e-14,95;UBERON:0006601,8.63e-14,95;UBERON:0000955,6.87e-13,47;UBERON:0006238,6.87e-13,47;UBERON:0002616,2.86e-12,46;UBERON:0002020,4.09e-12,34;UBERON:0010314,5.34e-12,92;UBERON:0003080,1.44e-11,40;UBERON:0001017,4.11e-11,73;UBERON:0003528,4.43e-11,29;UBERON:0002791,4.43e-11,29;UBERON:0001893,4.43e-11,29;UBERON:0002780,5.09e-11,39;UBERON:0001890,5.09e-11,39;UBERON:0006240,5.09e-11,39;UBERON:0001016,1.88e-10,75;UBERON:0000956,1.30e-07,21;UBERON:0001869,1.30e-07,21;UBERON:0000203,1.30e-07,21 | |||
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| ||
|short_description=p2@Pik3r3 | |||
}} | }} |
Latest revision as of 04:55, 26 September 2015
Short description: | p2@Pik3r3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pik3r3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -2bp_to_ENSMUST00000147292_5end |
EntrezGene: | Pik3r3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.92e-15 | 54 |
neurectoderm | 5.19e-15 | 64 |
neural plate | 5.19e-15 | 64 |
presumptive neural plate | 5.19e-15 | 64 |
ecto-epithelium | 1.26e-14 | 73 |
pre-chordal neural plate | 1.94e-14 | 49 |
neural tube | 6.08e-14 | 52 |
neural rod | 6.08e-14 | 52 |
future spinal cord | 6.08e-14 | 52 |
neural keel | 6.08e-14 | 52 |
ectoderm-derived structure | 8.63e-14 | 95 |
ectoderm | 8.63e-14 | 95 |
presumptive ectoderm | 8.63e-14 | 95 |
brain | 6.87e-13 | 47 |
future brain | 6.87e-13 | 47 |
regional part of brain | 2.86e-12 | 46 |
gray matter | 4.09e-12 | 34 |
structure with developmental contribution from neural crest | 5.34e-12 | 92 |
anterior neural tube | 1.44e-11 | 40 |
central nervous system | 4.11e-11 | 73 |
brain grey matter | 4.43e-11 | 29 |
regional part of telencephalon | 4.43e-11 | 29 |
telencephalon | 4.43e-11 | 29 |
regional part of forebrain | 5.09e-11 | 39 |
forebrain | 5.09e-11 | 39 |
future forebrain | 5.09e-11 | 39 |
nervous system | 1.88e-10 | 75 |
cerebral cortex | 1.30e-07 | 21 |
cerebral hemisphere | 1.30e-07 | 21 |
pallium | 1.30e-07 | 21 |