FFCP PHASE1:Mm9::chr3:84063538..84063555,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:84063538..84063555,- to FFCP PHASE1:Mm9::chr3:84063538..84063555,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=80890 | |EntrezGene=80890 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2382 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UHH4 | |UniProt=Q3UHH4 | ||
|association_with_transcript=144bp_to_uc008ppx.2_5end | |||
|cluster_id=chr3:84063538..84063555,- | |||
|description=CAGE_peak_8_at_Trim2_5end | |||
|id=chr3:84063538..84063555,- | |||
|ontology_enrichment_celltype=CL:0000117!3.46e-07!23;CL:0000337!3.46e-07!23;CL:0000540!7.90e-07!33;CL:0000047!7.90e-07!33;CL:0000031!7.90e-07!33;CL:0000404!7.90e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-09,23;CL:0000337,1.98e-09,23;CL:0000540,6.81e-08,33;CL:0000047,6.81e-08,33;CL:0000031,6.81e-08,33;CL:0000404,6.81e-08,33;CL:0000393,3.72e-07,39;CL:0000211,3.72e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.40e-17!102;UBERON:0000924!3.40e-17!102;UBERON:0006601!3.40e-17!102;UBERON:0000033!6.12e-15!63;UBERON:0000073!2.53e-14!75;UBERON:0001016!2.53e-14!75;UBERON:0001017!3.33e-14!73;UBERON:0005743!3.33e-14!73;UBERON:0002346!6.19e-14!71;UBERON:0003075!6.19e-14!71;UBERON:0007284!6.19e-14!71;UBERON:0000955!1.96e-12!50;UBERON:0006238!1.96e-12!50;UBERON:0001049!3.99e-12!52;UBERON:0005068!3.99e-12!52;UBERON:0006241!3.99e-12!52;UBERON:0007135!3.99e-12!52;UBERON:0002020!5.49e-12!34;UBERON:0002616!6.04e-12!49;UBERON:0000956!1.02e-11!21;UBERON:0001869!1.02e-11!21;UBERON:0000203!1.02e-11!21;UBERON:0003056!2.27e-11!49;UBERON:0002791!6.79e-11!29;UBERON:0003528!6.79e-11!29;UBERON:0001893!6.79e-11!29;UBERON:0002619!5.07e-09!17;UBERON:0003080!1.05e-08!40;UBERON:0002021!2.87e-08!10;UBERON:0000411!2.87e-08!10;UBERON:0001950!2.87e-08!10;UBERON:0002780!3.51e-08!39;UBERON:0001890!3.51e-08!39;UBERON:0006240!3.51e-08!39;UBERON:0007811!4.12e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.81e-23,95;UBERON:0000924,2.81e-23,95;UBERON:0006601,2.81e-23,95;UBERON:0001017,3.92e-23,73;UBERON:0001016,2.91e-22,75;UBERON:0000073,3.02e-21,54;UBERON:0000956,9.62e-20,21;UBERON:0001869,9.62e-20,21;UBERON:0000203,9.62e-20,21;UBERON:0002346,1.64e-19,64;UBERON:0003075,1.64e-19,64;UBERON:0007284,1.64e-19,64;UBERON:0001049,4.84e-19,52;UBERON:0005068,4.84e-19,52;UBERON:0006241,4.84e-19,52;UBERON:0007135,4.84e-19,52;UBERON:0000955,4.76e-18,47;UBERON:0006238,4.76e-18,47;UBERON:0002021,2.38e-17,10;UBERON:0000411,2.38e-17,10;UBERON:0001950,2.38e-17,10;UBERON:0010371,2.56e-17,73;UBERON:0002616,4.83e-17,46;UBERON:0002020,6.26e-17,34;UBERON:0003056,6.62e-17,49;UBERON:0003528,1.19e-16,29;UBERON:0002791,1.19e-16,29;UBERON:0001893,1.19e-16,29;UBERON:0003080,3.01e-15,40;UBERON:0002780,4.18e-14,39;UBERON:0001890,4.18e-14,39;UBERON:0006240,4.18e-14,39;UBERON:0002619,8.75e-14,17;UBERON:0010314,4.54e-11,92;UBERON:0000025,3.24e-09,114;UBERON:0004111,6.83e-09,122;UBERON:0011216,4.02e-08,194 | |||
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|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0.430761996159075,0,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,1.46837401729345,0,0.872100625521786,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.48855069540346,2.29510095163874,1.68259969081106,0,0.662605622854841,0.857435594504678,0.575072826109418,0,3.30347642998166,1.40456071893706,1.99688493233117,0.395658863190582,0.548925861614458,0,2.23346399201105,0,1.06958773443767,2.06240009831567,1.42371680799103,0.745597783301202,0.302904773332736,0.151143120213571,0.289864488701678,0,2.03991400112325,0.539703191637817,0.649776417447669,2.24013443548668,0.140444420131752,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0.505524445014783,0.34255163915718,0,0.148442139064825,0,0,0,0.60289056221049,0.823120949949934,0.125666591329675,0,0.722996784599558,0,0,0,0.484875253135222,0,1.75668478206928,0.41889341362691,0.510914110417183,0,0,0,2.09706895166752,0,0.879580464790051,4.86708096538374,6.39288643325826,1.24672826735736,2.92034273521964,0,0.248813941220186,0,1.68353484709179,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,1.15662048557257,0.768682321709099,1.03071897015702,2.58703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,7.14985825118033,2.36680608472354,1.32167513193519,1.05780226665418,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0.387904974335251,0.631222379012867,0.316182685621286,0.885660887877613,0.470996183524124,0.863780147452604,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,2.77836765741823,2.69096120282868,1.4473305640901,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,1.44495530989013,2.34423373184406,1.63934945376675,0,0.315508219416257,0,0.861693590931196,0.716906393857656,2.00518806674155,1.41538265394416,0,0,0.395287777946524,1.28528526568723,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0.661585194164886,1.31909002353184,0.645857706783622,0.241251699712623,0.954978752025092,0.492422699235184,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,1.01659733563424,0.324016022465404,0,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.777689839750757,2.4853572523477,0,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,2.25900737046827,1.84130094602871,1.14579102687879,1.89038500578056,4.11049511862385,2.2661816921691,4.72515750162264,3.60256962579376,5.43770890781046,4.65984280576638,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0,0.50695859978048,0.565879024158229,0.468207537349412,0.192075457214608,0.402048282689293,0.952587382566147,0.463537303779422,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.0941093804153306,0.423073039458382,0.548783918618318,0,0.135804113845862,0.561142271657738,0.593175090620871,0,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0.441182838239031,0.463735671240843 | ||
|short_description=p8@Trim2 | |||
}} | }} |
Latest revision as of 18:28, 25 September 2015
Short description: | p8@Trim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Trim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2382 |
Association with transcript: | 144bp_to_uc008ppx.2_5end |
EntrezGene: | Trim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-09 | 23 |
neuron | 6.81e-08 | 33 |
neuronal stem cell | 6.81e-08 | 33 |
neuroblast | 6.81e-08 | 33 |
electrically signaling cell | 6.81e-08 | 33 |
electrically responsive cell | 3.72e-07 | 39 |
electrically active cell | 3.72e-07 | 39 |