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FFCP PHASE1:Mm9::chr3:54611692..54611726,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:54611692..54611726,-
|DHSsupport=NA
|short_description=p1@Rfxap
|DPIdataset=NA
|description=CAGE_peak_1_at_Rfxap_5end
|association_with_transcript=0bp_to_ENSMUST00000044373,NM_133231,uc008pfw.1_5end
|EntrezGene=170767
|EntrezGene=170767
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=F7DBT7,Q8VCG9
|UniProt=F7DBT7,Q8VCG9
|association_with_transcript=0bp_to_ENSMUST00000044373,NM_133231,uc008pfw.1_5end
|cluster_id=chr3:54611692..54611726,-
|description=CAGE_peak_1_at_Rfxap_5end
|id=chr3:54611692..54611726,-
|ontology_enrichment_celltype=CL:0000117!7.43e-14!23;CL:0000337!7.43e-14!23;CL:0000540!5.71e-08!33;CL:0000047!5.71e-08!33;CL:0000031!5.71e-08!33;CL:0000404!5.71e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,7.43e-14,23;CL:0000337,7.43e-14,23;CL:0000540,5.71e-08,33;CL:0000047,5.71e-08,33;CL:0000031,5.71e-08,33;CL:0000404,5.71e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.54e-20,54;UBERON:0001049,3.42e-19,52;UBERON:0005068,3.42e-19,52;UBERON:0006241,3.42e-19,52;UBERON:0007135,3.42e-19,52;UBERON:0001017,1.32e-17,73;UBERON:0001016,1.66e-16,75;UBERON:0000955,1.39e-15,47;UBERON:0006238,1.39e-15,47;UBERON:0002346,1.96e-15,64;UBERON:0003075,1.96e-15,64;UBERON:0007284,1.96e-15,64;UBERON:0002616,2.08e-15,46;UBERON:0002020,8.75e-15,34;UBERON:0010371,4.39e-14,73;UBERON:0004121,8.82e-14,95;UBERON:0000924,8.82e-14,95;UBERON:0006601,8.82e-14,95;UBERON:0003080,2.04e-13,40;UBERON:0002780,3.11e-13,39;UBERON:0001890,3.11e-13,39;UBERON:0006240,3.11e-13,39;UBERON:0003056,6.69e-12,49;UBERON:0003528,1.69e-11,29;UBERON:0002791,1.69e-11,29;UBERON:0001893,1.69e-11,29;UBERON:0010314,3.71e-11,92;UBERON:0000956,2.54e-07,21;UBERON:0001869,2.54e-07,21;UBERON:0000203,2.54e-07,21
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0954325742895,18.6849239621716,22.7906242655771,19.8709933009022,23.8709893101133,17.0266118794192,21.7257431846745,16.9795615012249,14.9121435140862,36.0763480757882,15.6992373346178,19.0277264025662,19.2506676460607,17.307416346016,21.1195156863473,20.0680878084239,20.5722928053441,22.7544777403793,45.4178147152891,36.8678408010068,16.7485893932934,24.1243006195295,25.575028334042,24.5550355428033,20.7670966974278,24.2391252833143,23.5583081059139,22.8918767120595,25.6454782868295,25.7579006493899,26.1139819504417,28.5551590567475,28.2862814422569,25.9466722843083,15.1909357022192,21.0886655705361,14.5336447707351,16.9563462527719,11.0118068598349,12.1993609043268,10.0733393346996,14.1483130192183,19.5613120573792,36.1441179274923,32.6830917920096,33.8008352929244,25.0905646221784,34.2541259885321,25.6833925112498,31.0510350106631,27.4695933966774,32.1731110378785,25.3702552758392,31.9665030559264,17.1580695562443,17.9270286041841,19.2054306483952,21.7997689133102,29.5988048604523,18.6687251353357,18.3371200942616,16.3668796891826,16.6780159764106,15.7157165931949,18.4853814558355,21.537546718073,19.5276714834851,22.7444457064229,20.9569224164552,19.8162197365703,26.6214724239913,21.0163809409686,23.4046283013692,26.0580631812916,22.3619515760765,21.6976932852062,20.0578054952613,24.468438907986,19.9690474624357,20.6708609346233,21.834786049341,24.3089363784093,20.2011217796786,26.0997039873183,23.4440668053841,22.9169384175026,22.3109051307791,15.6254354894725,20.9840885467875,17.0770074165148,14.6112316752843,17.4072382182647,19.8532277207564,17.8538233427725
|phase1_expression=21.9403920533568,17.7977457896074,13.6499771816861,20.8700305801713,25.0447864973174,16.1164101035414,12.3814699515629,19.497621839678,14.9236045480767,12.6394844213876,14.5535272991679,17.1510141839973,24.4817043801624,24.2154514700623,17.9879271380458,19.6401009368131,15.3903613188192,16.0885704332701,12.3402990245165,18.6731446791133,21.0056926673142,21.7447183129939,15.6719873483361,12.4794089778857,11.4704640533585,16.6527269593356,11.630573896295,15.0829862880122,12.9215925230334,13.1055667475164,15.9645967671819,6.35030673459631,11.0711661765223,0,17.0422455653252,19.2832188615851,20.0085969137122,24.2748345827406,21.0960543021426,21.9879972468995,24.7057224973026,30.7370468231301,30.1016418879315,10.4494358919729,12.7734933336588,11.3798986340243,24.2541316747892,20.494364699762,16.9158360705543,13.4156630361256,14.9785471139138,15.8127820801469,21.4761735753903,20.3101399763176,29.9123481236793,18.7799388306241,16.9054729563866,15.4701627683233,39.249393406762,38.0873505075864,31.0577387718028,11.5207140903505,9.78224275722253,29.6966906702862,19.7773272513395,26.2877642530057,29.3608108308037,40.3429220587632,28.7220226094483,27.4062054813332,25.86997024622,43.1332986449743,44.1737081903227,28.7853378155142,32.0123873200909,24.8189072384706,33.0347642998166,31.6664598451266,35.943928781961,36.2687291258033,37.1439833025783,33.3384557156326,42.9941818462127,36.0168070420275,28.7260705820403,41.5426305517871,40.2911856661461,37.0934897192348,18.1742863999642,15.4165982617842,11.0148505706638,22.371020801516,29.918738683141,19.9690180905992,17.5439632710871,21.5052905806721,22.7519960613438,12.1005529030421,12.7295142255406,13.4269038313929,18.3096445709685,6.41632387071589,7.64415719119937,7.11066703153331,12.9894624606728,10.6411143499541,15.6712577954583,18.954524033364,11.6522047641227,13.3597925158342,18.5629299639765,17.9634632204163,21.9084722393256,16.1273225391306,18.8141931417128,19.8553214300887,24.2251068379686,8.53136205827479,22.9998743506967,23.6179600923217,22.0841518460394,21.3345111379498,16.775258509631,26.3502717310392,36.0248335719143,14.3055950916811,12.7004031976275,28.1954283566902,16.5191295194984,23.666921025962,24.7050325522058,37.8219599859722,23.9877561865342,36.0558794835766,23.2722609906707,34.0706652442291,25.9690377818307,20.7759640918855,14.4051972307195,18.5188833180097,21.4698730888461,21.1509936078795,17.2859644613135,23.6606564002073,19.5945117555824,20.7544226861457,22.6758173434544,20.1788629176432,20.6945273215529,20.2343505779567,16.3634545472472,23.4539433697505,24.190110682627,20.5468778248078,23.0475992776897,22.8889406841267,11.2354109970118,18.2717014051448,22.1647529528562,19.6769483908727,17.8239805585633,21.6074473753218,20.8335367314985,21.0537727969722,23.2943340459941,22.0907247512887,21.7301455133692,21.2512923108248,19.2535024398772,18.5509234409378,21.888578577381,21.7837981263745,22.1745616443961,28.8543800334799,27.1274033647724,35.1933774337153,13.8775888853195,15.073682299822,23.0351310578053,24.384850545346,13.9176858227861,13.3111126251406,18.0126215514345,16.7398550979052,18.506633400236,19.7638745668813,20.3581519128218,17.110256595539,18.7165523634355,17.0775687644302,16.6426298403515,16.7278669533668,20.1047975010267,21.3644718580193,13.5249282807697,17.9213168503877,21.1408211012712,18.7963997306054,21.1842399366262,20.2225902732055,19.7818397080132,18.3861774243483,20.1587786419261,18.3529616287703,16.9040735797355,19.7878658898671,15.0116489827492,13.9882752656402,14.2590476997595,13.2340223227373,14.5921704097532,14.2771934857802,18.6898668485561,13.3970741160661,19.9704110793319,22.4795201372929,18.477933592757,22.1924019827149,10.5309318394965,19.3281240005894,14.3409179268983,18.3324692637203,17.3670783733492,18.2581820611579,19.9956658344252,17.7571619550597,16.2364198429377,14.6166695168191,18.656207932926,19.0081445070256,17.4411831684555,18.0811323226889,22.6186925908908,17.9488875660174,21.1458637398186,14.3487108078461,28.7385556078148,30.8266735737494,15.5738198107842,26.0045055020504,17.0374438484779,16.7888660047555,14.4333676480975,20.5513166239195,17.6010952525091,17.5507449089076,19.02610297872,14.3205370376543,20.5549644532192,23.4564560987919,13.9101283504103,26.1756437390865,24.1072699843293,15.1772513134733,19.9117707509944,16.9946445308487,22.9765903293211,23.3870298897314,21.5570381802964,22.7502009478506,24.0338312646446,21.4484900391728,19.9638531895444,28.4433082142234,32.6797686582496,45.3796390292022,24.1712120085189,22.6876978479451,23.9313564998096,24.0057479235383,20.0394464015769,21.9393645650547,24.1887060285118,30.7509598605745,13.6109590676952,20.9713750155182,15.6575162619023,24.0733929294561,16.3079070962865,23.8839182715497,20.8901602005489,20.3534715683876,18.0718118710507,26.5158181875029,15.7201210334024,22.9089423439177,18.1490636822317,18.6484772434644,18.3170265146174,18.9885883761414,20.0574547392749,25.7510672275531,21.1445959920768,21.9574242143476,17.8729836373341,18.0954325742895,18.6849239621716,22.7906242655771,19.8709933009022,23.8709893101133,17.0266118794192,21.7257431846745,16.9795615012249,14.9121435140862,36.0763480757882,15.6992373346178,19.0277264025662,19.2506676460607,17.307416346016,21.1195156863473,20.0680878084239,20.5722928053441,22.7544777403793,45.4178147152891,36.8678408010068,16.7485893932934,24.1243006195295,25.575028334042,24.5550355428033,20.7670966974278,24.2391252833143,23.5583081059139,22.8918767120595,25.6454782868295,25.7579006493899,26.1139819504417,28.5551590567475,28.2862814422569,25.9466722843083,15.1909357022192,21.0886655705361,14.5336447707351,16.9563462527719,11.0118068598349,12.1993609043268,10.0733393346996,14.1483130192183,19.5613120573792,36.1441179274923,32.6830917920096,33.8008352929244,25.0905646221784,34.2541259885321,25.6833925112498,31.0510350106631,27.4695933966774,32.1731110378785,25.3702552758392,31.9665030559264,17.1580695562443,17.9270286041841,19.2054306483952,21.7997689133102,29.5988048604523,18.6687251353357,18.3371200942616,16.3668796891826,16.6780159764106,15.7157165931949,18.4853814558355,21.537546718073,19.5276714834851,22.7444457064229,20.9569224164552,19.8162197365703,26.6214724239913,21.0163809409686,23.4046283013692,26.0580631812916,22.3619515760765,21.6976932852062,20.0578054952613,24.468438907986,19.9690474624357,20.6708609346233,21.834786049341,24.3089363784093,20.2011217796786,26.0997039873183,23.4440668053841,22.9169384175026,22.3109051307791,15.6254354894725,20.9840885467875,17.0770074165148,14.6112316752843,17.4072382182647,19.8532277207564,17.8538233427725
|short_description=p1@Rfxap
}}
}}

Latest revision as of 14:28, 25 September 2015

Short description:p1@Rfxap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rfxap_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000044373, NM_133231, uc008pfw.1_5end
EntrezGene:Rfxap
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rfxap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.38
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.67
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I215.08
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C113.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.77
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B724.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.92
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C339.25
Mouse Granule cells, donor2.CNhs12357.11731-123E338.09
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.52
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C829.36
Mouse Microglia, donor2.CNhs12634.11736-123E840.34
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F143.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D544.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.79
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D624.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D833.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D641.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.29
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D918.17
Mouse Schwann, donor2.CNhs12573.11746-123F915.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A722.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.95
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C518.56
adrenal gland, embryo E16.CNhs11004.1254-43D617.96
adrenal gland, embryo E17.CNhs11043.1263-45I121.91
adrenal gland, embryo E18.CNhs11026.1262-18F516.13
adrenal gland, neonate N00.CNhs11191.1311-23C118.81
adrenal gland, neonate N25.CNhs11223.1377-27I319.86
amnion, adult pregnant day17.5.CNhs10488.583-22A824.23
aorta, adult.CNhs10498.46-23H18.53
bone (os femoris), adult.CNhs10483.56-12G223.00
bone (os femoris), neonate N02.CNhs11227.1985-43F523.62
bone (os femoris), neonate N16.CNhs11225.1525-43A622.08
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B226.35
cerebellum, neonate N30.CNhs11135.1395-42I236.02
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.70
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.52
corpora quadrigemina, adult.CNhs10501.16-22A423.67
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F137.82
cortex, adult.CNhs10473.12-14D523.99
cortex, neonate N30.CNhs11107.1392-42F236.06
diencephalon, adult.CNhs10482.20-12F223.27
diencephalon, neonate N30.CNhs11201.1388-42B234.07
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.78
epididymis, adult.CNhs10490.58-23B214.41
eyeball, adult.CNhs10484.31-12G418.52
eyeball, embryo E12.CNhs11016.345-16C621.47
eyeball, embryo E14.CNhs10521.399-16E221.15
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D423.66
eyeball, neonate N00.CNhs11207.633-15C619.59
eyeball, neonate N01.CNhs11140.1532-43E720.75
eyeball, neonate N02.CNhs11205.1551-44G822.68
eyeball, neonate N16.CNhs11188.777-19A220.18
forelimb, embryo E11.CNhs10596.335-25E220.69
forelimb, embryo E12.CNhs10600.359-14H220.23
forelimb, embryo E13.CNhs10589.384-1E216.36
forelimb, embryo E14.CNhs10577.413-26A823.45
forelimb, embryo E15.CNhs11007.437-20E724.19
forelimb, embryo E17.CNhs10598.1517-43C420.55
forelimb, embryo E18.CNhs11008.1520-43B523.05
gonad, embryo E13.CNhs11044.1564-45I622.89
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.27
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.16
heart, embryo E11.CNhs10586.331-24E919.68
heart, embryo E12.CNhs11015.353-12F517.82
heart, embryo E13.CNhs11013.376-3I921.61
heart, embryo E14.CNhs10597.403-26D420.83
heart, embryo E15.CNhs11017.431-16C821.05
heart, embryo E16.CNhs11021.457-17C623.29
heart, embryo E17.CNhs11025.479-18E522.09
heart, embryo E18.CNhs11030.1283-20G321.73
heart, neonate N00.CNhs11213.639-21E321.25
heart, neonate N03.CNhs11221.1349-25I219.25
heart, neonate N10.CNhs11118.749-24G118.55
heart, neonate N16.CNhs11209.782-15G121.89
heart, neonate N20.CNhs11127.821-26I621.78
heart, neonate N25.CNhs11196.1351-25D322.17
heart, neonate N30.CNhs11202.1390-42D228.85
hippocampus, adult.CNhs10478.13-16E827.13
hippocampus, neonate N00.CNhs11228.627-43G135.19
intestinal mucosa, adult.CNhs10506.860-29I313.88
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I523.04
intestine, embryo E13.CNhs11010.381-16D524.38
intestine, embryo E15.CNhs10602.976-16D813.92
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F716.74
intestine, neonate N00.CNhs11126.644-26D118.51
intestine, neonate N01.CNhs11192.1322-23E919.76
intestine, neonate N06.CNhs11102.688-20B820.36
intestine, neonate N07.CNhs11095.720-20F217.11
intestine, neonate N10.CNhs11098.755-23A518.72
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I920.10
kidney, embryo E15.CNhs10997.434-16F821.36
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I217.92
kidney, embryo E18.CNhs11001.1288-20C721.14
kidney, neonate N00.CNhs11214.646-21G718.80
kidney, neonate N10.CNhs11206.758-6D521.18
kidney, neonate N20.CNhs11113.832-19I120.22
kidney, neonate N25.CNhs11122.1353-25F319.78
kidney, neonate N30.CNhs11203.1385-42H118.39
liver, adult pregnant day01.CNhs10466.508-5B220.16
liver, embryo E12.CNhs10601.355-15F818.35
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E119.79
liver, embryo E15.CNhs10520.433-16D715.01
liver, embryo E16.CNhs10523.462-17F513.99
liver, embryo E17.CNhs10510.481-18A314.26
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F414.59
liver, neonate N03.CNhs11123.1345-25G214.28
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B919.97
liver, neonate N20.CNhs11220.823-25A322.48
liver, neonate N25.CNhs11198.1368-26H118.48
liver, neonate N30.CNhs11106.1382-42D122.19
lung, adult.CNhs10474.28-22B110.53
lung, embryo E12.CNhs10522.354-16G219.33
lung, embryo E14.CNhs10604.404-26F814.34
lung, embryo E15.CNhs11020.432-17C518.33
lung, embryo E16.CNhs10998.458-17B617.37
lung, embryo E17.CNhs10605.480-44A618.26
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C617.76
lung, neonate N06.CNhs11212.683-20E516.24
lung, neonate N07.CNhs11111.715-19A314.62
lung, neonate N10.CNhs11219.750-23E618.66
lung, neonate N20.CNhs11109.822-18A419.01
lung, neonate N25.CNhs11119.1359-25C717.44
lung, neonate N30.CNhs11133.1394-42H218.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B621.15
mammary gland, adult pregnant day19.CNhs10476.588-5H214.35
medulla oblongata, adult.CNhs10477.17-12C228.74
medulla oblongata, neonate N30.CNhs11200.1396-42A330.83
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I713.91
ovary, embryo E18.CNhs11040.505-44H726.18
ovary, neonate N00.CNhs11217.1299-22I424.11
oviduct, adult pregnant day01.CNhs10500.988-6G615.18
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F222.98
pancreas, embryo E16.CNhs11003.460-26E523.39
pancreas, embryo E17.CNhs10599.1558-45G321.56
pancreas, embryo E18.CNhs10580.1535-43I722.75
pancreas, neonate N00.CNhs11105.645-26G924.03
pancreas, neonate N01.CNhs11138.1531-43D721.45
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B628.44
pancreas, neonate N25.CNhs11094.1555-45E232.68
pancreas, neonate N30.CNhs11182.1548-44H545.38
pituitary gland, adult.CNhs10493.21-1G824.17
pituitary gland, embryo E12.CNhs11018.346-16E622.69
pituitary gland, embryo E13.CNhs11009.370-44C723.93
pituitary gland, embryo E14.CNhs11037.398-44A524.01
pituitary gland, embryo E15.CNhs10592.427-16B920.04
pituitary gland, embryo E16.CNhs11036.449-43F621.94
pituitary gland, embryo E17.CNhs11039.1265-44F524.19
pituitary gland, neonate N00.CNhs11190.1308-22E930.75
placenta, adult pregnant day10.CNhs10472.539-13I713.61
placenta, adult pregnant day17.CNhs10464.577-18G320.97
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C324.07
skin, neonate N00.CNhs11124.650-25G416.31
skin, neonate N03.CNhs11215.662-22H323.88
skin, neonate N06.CNhs11097.693-20I520.89
skin, neonate N10.CNhs11108.762-6C420.35
small intestine, neonate N16.CNhs11114.790-21I118.07
spinal cord, adult.CNhs10505.24-13C926.52
spleen, adult.CNhs10465.25-2G215.72
spleen, embryo E16.CNhs11035.461-43C122.91
spleen, embryo E18.CNhs11011.1271-21F218.15
spleen, neonate N10.CNhs11116.752-24D118.65
spleen, neonate N20.CNhs11112.824-19H118.32
spleen, neonate N25.CNhs11099.1354-25G318.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.14
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E317.87
stomach, embryo E15.CNhs10603.1252-16G818.10
stomach, embryo E16.CNhs11022.459-17D418.68
stomach, embryo E17.CNhs11006.1035-18D522.79
stomach, embryo E18.CNhs10999.1286-20C619.87
stomach, neonate N03.CNhs11193.1340-24B823.87
stomach, neonate N07.CNhs11210.718-18A917.03
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I116.98
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G536.08
testis, embryo E13.CNhs11031.389-23F515.70
testis, embryo E15.CNhs11034.443-27C519.03
testis, embryo E16.CNhs11033.470-26G519.25
testis, embryo E17.CNhs11029.486-18I517.31
testis, embryo E18.CNhs11027.503-18G521.12
testis, neonate N00.CNhs11189.1300-22B720.07
testis, neonate N07.CNhs11222.726-26I420.57
testis, neonate N10.CNhs11204.763-44D922.75
testis, neonate N20.CNhs11110.839-18H345.42
testis, neonate N30.CNhs11130.1391-42E236.87
thymus, adult.CNhs10471.38-12B516.75
thymus, embryo E14.CNhs11041.402-44I424.12
thymus, embryo E15.CNhs11005.430-45I225.58
thymus, embryo E16.CNhs11002.456-26C524.56
thymus, embryo E17.CNhs10581.478-18C120.77
thymus, embryo E18.CNhs10595.1273-19G424.24
thymus, neonate N02.CNhs11181.1541-43F823.56
thymus, neonate N03.CNhs11137.2104-43C722.89
thymus, neonate N06.CNhs11197.681-26C425.65
thymus, neonate N07.CNhs11211.713-19D325.76
thymus, neonate N10.CNhs11194.748-24E426.11
thymus, neonate N20.CNhs11186.820-7A228.56
thymus, neonate N25.CNhs11125.1362-25G728.29
thymus, neonate N30.CNhs11132.1393-42G225.95
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.96
urinary bladder, adult.CNhs10481.879-12E411.01
uterus, adult pregnant day19.CNhs10497.590-15F512.20
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.14
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I831.97
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H217.93
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B121.80
whole body, embryo E16.CNhs10514.453-14F229.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.31
whole body, embryo E17.5.CNhs10513.490-9F915.63
whole body, embryo E17.CNhs10517.475-3I520.98
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C617.41
whole body, neonate N06.CNhs10515.692-21D119.85
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.43e-1423
neuroblast (sensu Vertebrata)7.43e-1423
neuron5.71e-0833
neuronal stem cell5.71e-0833
neuroblast5.71e-0833
electrically signaling cell5.71e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.54e-2054
neural tube3.42e-1952
neural rod3.42e-1952
future spinal cord3.42e-1952
neural keel3.42e-1952
central nervous system1.32e-1773
nervous system1.66e-1675
brain1.39e-1547
future brain1.39e-1547
neurectoderm1.96e-1564
neural plate1.96e-1564
presumptive neural plate1.96e-1564
regional part of brain2.08e-1546
gray matter8.75e-1534
ecto-epithelium4.39e-1473
ectoderm-derived structure8.82e-1495
ectoderm8.82e-1495
presumptive ectoderm8.82e-1495
anterior neural tube2.04e-1340
regional part of forebrain3.11e-1339
forebrain3.11e-1339
future forebrain3.11e-1339
pre-chordal neural plate6.69e-1249
brain grey matter1.69e-1129
regional part of telencephalon1.69e-1129
telencephalon1.69e-1129
structure with developmental contribution from neural crest3.71e-1192
cerebral cortex2.54e-0721
cerebral hemisphere2.54e-0721
pallium2.54e-0721
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