FFCP PHASE1:Mm9::chr3:32716528..32716559,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:32716528..32716559,+ to FFCP PHASE1:Mm9::chr3:32716528..32716559,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72607 | |EntrezGene=72607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=Q5BKP2,D3YYG7 | |UniProt=Q5BKP2,D3YYG7 | ||
|association_with_transcript=0bp_to_NM_001013024,uc008owr.1,uc008ows.1_5end | |||
|cluster_id=chr3:32716528..32716559,+ | |||
|description=CAGE_peak_1_at_Usp13_5end | |||
|id=chr3:32716528..32716559,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.95e-11!18;UBERON:0000948!4.95e-11!18;UBERON:0005498!4.95e-11!18;UBERON:0004140!4.95e-11!18;UBERON:0009881!4.95e-11!18;UBERON:0004141!4.95e-11!18;UBERON:0003084!4.95e-11!18;UBERON:0007005!4.95e-11!18;UBERON:0004139!4.95e-11!18;UBERON:0004291!4.95e-11!18;UBERON:0004535!7.80e-11!23;UBERON:0001009!7.80e-11!23;UBERON:0000468!6.96e-07!333;UBERON:0004872!8.52e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.83e-11,18;UBERON:0000948,1.83e-11,18;UBERON:0005498,1.83e-11,18;UBERON:0004140,1.83e-11,18;UBERON:0009881,1.83e-11,18;UBERON:0004141,1.83e-11,18;UBERON:0003084,1.83e-11,18;UBERON:0007005,1.83e-11,18;UBERON:0004139,1.83e-11,18;UBERON:0004291,1.83e-11,18;UBERON:0004535,5.41e-11,23;UBERON:0001009,5.41e-11,23;UBERON:0010314,2.99e-08,92;UBERON:0004872,6.86e-07,33 | |||
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| |phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66535680890098,4.35920804243913,4.58866880404204,0,0.65407546914134,0.439372365468944,0.58328969722285,2.09979632438044,0,0,0,0,2.05807548828758,3.72493471920384,6.70373719960675,4.45096213891115,1.05798195854407,2.53532561402472,1.35537812827653,1.77858959222228,0,0.988866362566974,0.7104801149461,1.19840044207362,1.15265491596466,0.311068836925433,0.945041568321835,0.210324961351382,3.99911378165325,4.19650227808066,0.979926393719632,0.766763768145891,1.83843757322004,4.40463523997555,4.34136949489638,5.06901559745603,2.37395317914349,2.10421580285542,2.6045668527838,4.4669279840221,3.37657566019008,4.43114918552749,2.94628585473668,4.9830088279686,2.23679334990361,1.28734528666413,1.81371744256285,0.579728977403356,0,0,0,0,0,26.1226621445058,2.04516387093669,2.33807404142582,2.82671659608272,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0,4.11061966988616,0,0.890652834388949,2.77576522825817,1.82679286987285,1.61430848079241,2.11011696773672,2.4693628498498,1.0053327306374,0.494389935468748,3.03658649531814,27.4229271104461,33.8092716390085,37.7638996567273,32.0017667069247,0,2.34224637609238,3.35114730901528,0.255457055208591,0,0,0,5.54225365797844,3.66000482254901,1.00523481690292,2.9550134432687,3.3243009452943,4.57133698031032,3.73154905055843,4.07357455401265,20.4027431800553,0.252722758433675,3.36706969418358,2.86264974517948,3.21862946206862,2.34080768746954,3.61691562805716,4.21826294738233,3.97152532883034,4.31027932974753,6.20888089773638,2.37124792226126,4.9167580843633,2.81521798662318,2.41115305670332,2.22437799380478,5.57203466435466,3.90986059175093,1.99034266818493,0,0,0,32.7258720606093,32.1300702174102,33.4915434317488,33.8544971886851,46.2395944606399,34.0930319481106,48.8321283975856,49.8988526603292,56.2808950209757,64.6720210159978,60.5777942451861,102.30883764687,95.7609917635927,108.67730706907,110.317676221026,1.47202963994889,0.92614151141356,0,0.264450566663544,3.83918850963421,2.78684006232526,2.96395161040815,1.4117846723634,0.667134131534611,1.52180500890047,0.949058123089023,0.823494773620054,1.50801125280162,1.1937388322469,1.16978452271472,0.898819408654221,0.648414149624083,0,2.0863469104839,2.85621281524322,0,2.44381593414377,1.35766741017338,1.68325967736765,1.64414996523069,0.295220295959204,1.41298855057237,0.246794327843601,0,1.50160595144485,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0,0.287696137450811,0.162135226775035,0,5.75072826109418,1.11642284300551,0.312037673114561,0.252578877947112,2.15276896226295,0.482443521363367,1.84753190166605,2.84237117655727,2.11854469374634,3.73439188705414,3.28566347603903,6.03022526790537,4.76087281772027,2.92700471786698,1.7339865851681,3.32197034473162,3.02964060449226,4.58817281204066,5.35323443784276,1.88043776155965,0,0,0.491764273019036,1.10374698521893,7.70642831941401,7.501547941901,0.655739781506702,171.175288644565,2.52406575533005,1.17131623288992,1.07711698866399,0.477937595905104,1.55959071857676,1.13230612315533,1.21443210502468,2.04579100537918,0.790575555893047,5.78378369559253,3.12268187458191,3.91744328067962,3.90928702448583,8.24850614862677,0,3.15614827001476,0.604647113929502,1.32023555829129,1.18120757152309,2.76691633149535,0.775284879504663,1.09060118843252,4.27796854061666,1.26414703174326,1.05418608574999,1.03135543248187,3.40439605753788,2.70091641046965,0.776152102696527,0.428674070063185,1.06404140185364,1.96205699362278,1.64549020602121,2.13125464380219,0.938686832254841,1.27099242518292,0.882113592219848,36.7696344059501,7.75029248140347,5.06628569396509,2.14870219205646,2.9545361954111,0.582961673259701,6.30446026835733,0,2.06386867963222,1.11116716421827,0,0.136694227721025,0,0,0,0,0,2.68885594543965,2.64315307264903,1.83609079397062,2.29997125615916,1.09181281873089,2.29269388854195,1.32245529160537,3.14107130380836,1.8146096260851,0,0,2.8408143748356,2.15096037594227,2.52786544847262,1.54991788173277,1.18269287843545,2.11243029562357,1.3020438484395,0.943734099831398,0.241584120826006,19.0099804130191,0,1.41907650703115,1.43795340030758,0.51968329191118,0,0.596044064343795,0.120195449519969,0.295379054349154,0.403865799792591,0.0762068066549998,0,0,0,0,80.9427469506305,1.77588762699252,0.0897138566094757,0.503653849092235,0.579568782096571,2.81523713176773,5.67770035228522,2.14368379079066,0.501572104035363,3.95326289831947,5.06357760157895,2.29158205375759,4.81188910562325,2.74033007908257,3.7769694869485,5.40018000185445,3.15224842256954,2.26571204492102,5.1776031175182,1.55681021376265,1.59609949360412,3.07320490357441,4.37592090722929,2.72497111416377,3.67687016900028,10.6678429344775,9.06554251851134,7.70206103020357,7.58091635291392,12.9274442944022,11.8834595073228,9.83235828433765,9.98792377515961,9.64915878454303,14.2888107384922,11.1248952907061,10.4170979050401,8.65380391686944,10.892720089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| ||
|short_description=p1@Usp13 | |||
}} | }} |
Latest revision as of 22:52, 1 October 2015
Short description: | p1@Usp13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Usp13_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_NM_001013024, uc008owr.1, uc008ows.1_5end |
EntrezGene: | Usp13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.83e-11 | 18 |
heart | 1.83e-11 | 18 |
primitive heart tube | 1.83e-11 | 18 |
primary heart field | 1.83e-11 | 18 |
anterior lateral plate mesoderm | 1.83e-11 | 18 |
heart tube | 1.83e-11 | 18 |
heart primordium | 1.83e-11 | 18 |
cardiac mesoderm | 1.83e-11 | 18 |
cardiogenic plate | 1.83e-11 | 18 |
heart rudiment | 1.83e-11 | 18 |
cardiovascular system | 5.41e-11 | 23 |
circulatory system | 5.41e-11 | 23 |
structure with developmental contribution from neural crest | 2.99e-08 | 92 |
splanchnic layer of lateral plate mesoderm | 6.86e-07 | 33 |