FFCP PHASE1:Mm9::chr3:129883800..129883817,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:129883800..129883817,+ to FFCP PHASE1:Mm9::chr3:129883800..129883817,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77018 | |EntrezGene=77018 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2360 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9H6,E9Q5L6 | |UniProt=G3X9H6,E9Q5L6 | ||
|association_with_transcript=0bp_to_ENSMUST00000080335,ENSMUST00000106353,ENSMUST00000143830,ENSMUST00000152873_5end | |||
|cluster_id=chr3:129883800..129883817,+ | |||
|description=CAGE_peak_1_at_Col25a1_5end | |||
|id=chr3:129883800..129883817,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.00e-11!33;CL:0000047!7.00e-11!33;CL:0000031!7.00e-11!33;CL:0000404!7.00e-11!33;CL:0000107!4.65e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.40e-11,33;CL:0000047,7.40e-11,33;CL:0000031,7.40e-11,33;CL:0000404,7.40e-11,33;CL:0000107,1.84e-07,9;CL:0000393,3.59e-07,39;CL:0000211,3.59e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-12!73;UBERON:0005743!1.65e-12!73;UBERON:0004121!1.81e-11!102;UBERON:0000924!1.81e-11!102;UBERON:0006601!1.81e-11!102;UBERON:0000073!2.24e-11!75;UBERON:0001016!2.24e-11!75;UBERON:0002346!2.14e-10!71;UBERON:0003075!2.14e-10!71;UBERON:0007284!2.14e-10!71;UBERON:0000468!1.58e-09!333;UBERON:0000033!5.59e-08!63;UBERON:0002616!2.78e-07!49;UBERON:0000955!3.40e-07!50;UBERON:0006238!3.40e-07!50;UBERON:0000922!3.47e-07!328;UBERON:0003056!3.72e-07!49;UBERON:0001049!4.51e-07!52;UBERON:0005068!4.51e-07!52;UBERON:0006241!4.51e-07!52;UBERON:0007135!4.51e-07!52;UBERON:0002410!4.65e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.33e-12,73;UBERON:0001016,3.01e-11,75;UBERON:0004121,8.06e-10,95;UBERON:0000924,8.06e-10,95;UBERON:0006601,8.06e-10,95;UBERON:0002346,1.14e-08,64;UBERON:0003075,1.14e-08,64;UBERON:0007284,1.14e-08,64;UBERON:0010371,9.22e-08,73;UBERON:0000073,1.15e-07,54;UBERON:0002410,1.84e-07,9;UBERON:0000922,2.27e-07,320;UBERON:0003056,9.61e-07,49 | |||
|phase1_expression=41.6387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,2.34717403304412,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,8.49729135610311,13.2247744818008,10.1413024560989,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,7.9982275633065,6.18431914664518,3.1847607795888,3.06705507258356,2.75765635983006,17.6185409599022,13.0241084846891,14.5926206593431,8.44072241473241,8.05091263701205,9.89735404057844,4.74611098302348,12.9435400307286,19.4053774676549,7.66034322231536,4.6982654663704,5.03278503728312,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.253359865475099,0,0,0,1.7813056687779,15.0932234286538,6.39377504455497,6.6878494204257,6.17962826265753,7.17291113527799,0.502666365318702,0,0,0,8.25010934731787,5.96272099843063,3.87900202508178,1.86391761218122,0.585561594023094,1.67557365450764,0,0,0,0,14.9790639404823,11.8950156732843,14.7015591972051,7.47444576826789,7.16003280524926,15.7918913865266,18.8199865158599,9.980257657331,1.36847667671102,0,0.631325567659422,11.9710807525687,5.74755261083682,4.14142898552303,7.53524089178575,3.87808045162569,2.43416068541215,3.09215691047105,3.88055056108524,6.25147179505242,30.0678667466833,22.1698416446576,8.32943783224784,11.6779844674751,6.268538997399,8.84863186554157,7.36426787228425,0,0,0,1.86413195281952,4.45599513964083,2.52086886045421,2.3674473558521,2.36117078096885,2.00547246753592,2.32533944750408,0.804820204198858,1.40118410840603,0.987359099480883,0.492502392237286,0.243206428637567,0.292399974850665,0,0,9.04246778825747,2.46971069710283,0,0,10.2378360256912,14.1664369834868,3.73715637834071,2.01683524623343,2.2237804384487,0.951128130562796,0,1.4822905925161,0.754005626400808,1.59165177632921,1.55971269695296,0,0.216138049874694,0.199141273254367,1.13800740571849,5.48392860526698,6.76246414038483,2.03651327845314,1.35766741017338,1.96380295692892,1.89709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,5.6727335943472,4.71741588271687,2.47348323623339,1.42002084971952,4.58236603529592,5.0925170356284,2.01387296215567,3.89124544260085,3.56929837144506,2.87536413054709,3.72140947668503,1.87222603868736,0.252578877947112,0,0,0,7.01118223550794,12.711268162478,22.9155865796504,32.6219445121018,29.8161138246432,34.0402406467,35.904591205835,12.6108115284953,12.8449519996289,9.8861956567642,0,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,4.33486592967038,6.79827782234778,0,0.252470927204373,21.4545589203055,26.5498346121714,23.9119971483407,29.1541933502113,18.0466926006739,13.8707500086528,26.717506310543,26.3030272120181,23.7172666767914,1.60660658210904,2.2710413633323,5.87616492101942,3.74640006513225,0.659880491890142,0,1.69946445308487,0.604647113929502,0.565815239267694,1.18120757152309,0.307435147943927,0.775284879504663,0,1.06949213515416,0,0,0,10.2131881726136,16.9257428389432,9.44318391614108,11.574199891706,9.3990323830405,10.5237602385222,17.4421961838248,21.0080814889074,1.17335854031855,0,0,0.16488625294148,7.26589920131575,3.67908842061751,1.55184047204077,0.164140899745061,0,4.26478194624172,0,1.03193433981611,0.555583582109135,0.376736914009382,0,0.228778173206523,0,0,0.138199973804424,0,5.69404788446044,6.30290348093231,4.10420295122845,3.55450103224597,6.11415178489297,2.69728692769641,3.2234847732881,0.523511883968059,0.388844919875379,0,0,7.7748603942869,9.43113395605456,25.6675568614143,27.5110424007567,26.3571555765614,19.9507305697782,7.29144555126121,1.78260885523708,0,0,0,2.43270258348197,2.56777392912068,0.51968329191118,0.358053391334963,0.596044064343795,0,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,2.0405734525369,0,0,0,24.5350784420882,0,0.183151624267265,0.214368379079066,0,2.25900737046827,0.920650473014354,1.14579102687879,1.3748254587495,3.42541259885321,4.5323633843382,2.70009000092722,3.15224842256954,3.62513927187364,2.07104124700728,4.04770655578289,13.9658705690361,12.6342868258059,9.48116196566347,2.93458427679175,2.5738091183002,5.778414922842,6.59312183164461,7.38114182061175,6.57012750585873,6.84394109703647,6.79054828989874,8.70866019469906,7.36289252655997,9.47685237767619,7.62069906052918,5.79421629724277,8.68091492086673,10.3021475200827,8.39033844766065,8.9146005620208,7.0990322463735,10.2527561677348,10.4649419975277,9.78737556319438,10.0691383391095,7.50004688778368,3.6829759601298,7.06181391998481,9.53941861818155,7.94854621431967,8.27437651954733,3.6830793885272,11.6202630889474,7.13754460630223,8.99318080576605,6.31615342802603,7.95022899978704,5.16478496585877,2.42650561031467,2.08681052058379 | |phase1_expression=41.6387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,2.34717403304412,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,8.49729135610311,13.2247744818008,10.1413024560989,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,7.9982275633065,6.18431914664518,3.1847607795888,3.06705507258356,2.75765635983006,17.6185409599022,13.0241084846891,14.5926206593431,8.44072241473241,8.05091263701205,9.89735404057844,4.74611098302348,12.9435400307286,19.4053774676549,7.66034322231536,4.6982654663704,5.03278503728312,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.253359865475099,0,0,0,1.7813056687779,15.0932234286538,6.39377504455497,6.6878494204257,6.17962826265753,7.17291113527799,0.502666365318702,0,0,0,8.25010934731787,5.96272099843063,3.87900202508178,1.86391761218122,0.585561594023094,1.67557365450764,0,0,0,0,14.9790639404823,11.8950156732843,14.7015591972051,7.47444576826789,7.16003280524926,15.7918913865266,18.8199865158599,9.980257657331,1.36847667671102,0,0.631325567659422,11.9710807525687,5.74755261083682,4.14142898552303,7.53524089178575,3.87808045162569,2.43416068541215,3.09215691047105,3.88055056108524,6.25147179505242,30.0678667466833,22.1698416446576,8.32943783224784,11.6779844674751,6.268538997399,8.84863186554157,7.36426787228425,0,0,0,1.86413195281952,4.45599513964083,2.52086886045421,2.3674473558521,2.36117078096885,2.00547246753592,2.32533944750408,0.804820204198858,1.40118410840603,0.987359099480883,0.492502392237286,0.243206428637567,0.292399974850665,0,0,9.04246778825747,2.46971069710283,0,0,10.2378360256912,14.1664369834868,3.73715637834071,2.01683524623343,2.2237804384487,0.951128130562796,0,1.4822905925161,0.754005626400808,1.59165177632921,1.55971269695296,0,0.216138049874694,0.199141273254367,1.13800740571849,5.48392860526698,6.76246414038483,2.03651327845314,1.35766741017338,1.96380295692892,1.89709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,5.6727335943472,4.71741588271687,2.47348323623339,1.42002084971952,4.58236603529592,5.0925170356284,2.01387296215567,3.89124544260085,3.56929837144506,2.87536413054709,3.72140947668503,1.87222603868736,0.252578877947112,0,0,0,7.01118223550794,12.711268162478,22.9155865796504,32.6219445121018,29.8161138246432,34.0402406467,35.904591205835,12.6108115284953,12.8449519996289,9.8861956567642,0,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,4.33486592967038,6.79827782234778,0,0.252470927204373,21.4545589203055,26.5498346121714,23.9119971483407,29.1541933502113,18.0466926006739,13.8707500086528,26.717506310543,26.3030272120181,23.7172666767914,1.60660658210904,2.2710413633323,5.87616492101942,3.74640006513225,0.659880491890142,0,1.69946445308487,0.604647113929502,0.565815239267694,1.18120757152309,0.307435147943927,0.775284879504663,0,1.06949213515416,0,0,0,10.2131881726136,16.9257428389432,9.44318391614108,11.574199891706,9.3990323830405,10.5237602385222,17.4421961838248,21.0080814889074,1.17335854031855,0,0,0.16488625294148,7.26589920131575,3.67908842061751,1.55184047204077,0.164140899745061,0,4.26478194624172,0,1.03193433981611,0.555583582109135,0.376736914009382,0,0.228778173206523,0,0,0.138199973804424,0,5.69404788446044,6.30290348093231,4.10420295122845,3.55450103224597,6.11415178489297,2.69728692769641,3.2234847732881,0.523511883968059,0.388844919875379,0,0,7.7748603942869,9.43113395605456,25.6675568614143,27.5110424007567,26.3571555765614,19.9507305697782,7.29144555126121,1.78260885523708,0,0,0,2.43270258348197,2.56777392912068,0.51968329191118,0.358053391334963,0.596044064343795,0,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,2.0405734525369,0,0,0,24.5350784420882,0,0.183151624267265,0.214368379079066,0,2.25900737046827,0.920650473014354,1.14579102687879,1.3748254587495,3.42541259885321,4.5323633843382,2.70009000092722,3.15224842256954,3.62513927187364,2.07104124700728,4.04770655578289,13.9658705690361,12.6342868258059,9.48116196566347,2.93458427679175,2.5738091183002,5.778414922842,6.59312183164461,7.38114182061175,6.57012750585873,6.84394109703647,6.79054828989874,8.70866019469906,7.36289252655997,9.47685237767619,7.62069906052918,5.79421629724277,8.68091492086673,10.3021475200827,8.39033844766065,8.9146005620208,7.0990322463735,10.2527561677348,10.4649419975277,9.78737556319438,10.0691383391095,7.50004688778368,3.6829759601298,7.06181391998481,9.53941861818155,7.94854621431967,8.27437651954733,3.6830793885272,11.6202630889474,7.13754460630223,8.99318080576605,6.31615342802603,7.95022899978704,5.16478496585877,2.42650561031467,2.08681052058379 | ||
|short_description=p1@Col25a1 | |||
}} | }} |
Latest revision as of 14:42, 1 October 2015
Short description: | p1@Col25a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Col25a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2360 |
Association with transcript: | 0bp_to_ENSMUST00000080335, ENSMUST00000106353, ENSMUST00000143830, ENSMUST00000152873_5end |
EntrezGene: | Col25a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.40e-11 | 33 |
neuronal stem cell | 7.40e-11 | 33 |
neuroblast | 7.40e-11 | 33 |
electrically signaling cell | 7.40e-11 | 33 |
autonomic neuron | 1.84e-07 | 9 |
electrically responsive cell | 3.59e-07 | 39 |
electrically active cell | 3.59e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.33e-12 | 73 |
nervous system | 3.01e-11 | 75 |
ectoderm-derived structure | 8.06e-10 | 95 |
ectoderm | 8.06e-10 | 95 |
presumptive ectoderm | 8.06e-10 | 95 |
neurectoderm | 1.14e-08 | 64 |
neural plate | 1.14e-08 | 64 |
presumptive neural plate | 1.14e-08 | 64 |
ecto-epithelium | 9.22e-08 | 73 |
regional part of nervous system | 1.15e-07 | 54 |
autonomic nervous system | 1.84e-07 | 9 |
embryo | 2.27e-07 | 320 |
pre-chordal neural plate | 9.61e-07 | 49 |