FFCP PHASE1:Mm9::chr3:127111962..127111982,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:127111962..127111982,- to FFCP PHASE1:Mm9::chr3:127111962..127111982,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109676 | |EntrezGene=109676 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=826 | |||
|TSSclassifier=NA | |||
|UniProt=E9PW46,Q8C8R3 | |UniProt=E9PW46,Q8C8R3 | ||
|association_with_transcript=-13bp_to_ENSMUST00000090335,ENSMUST00000171354,uc008rgv.1,uc008rgy.1,uc008rha.1,uc012cxg.1_5end | |||
|cluster_id=chr3:127111962..127111982,- | |||
|description=CAGE_peak_6_at_Ank2_5end | |||
|id=chr3:127111962..127111982,- | |||
|ontology_enrichment_celltype=CL:0000540!8.34e-17!33;CL:0000047!8.34e-17!33;CL:0000031!8.34e-17!33;CL:0000404!8.34e-17!33;CL:0002319!1.51e-15!43;CL:0000221!1.66e-15!44;CL:0000133!1.66e-15!44;CL:0000393!6.52e-15!39;CL:0000211!6.52e-15!39;CL:0000055!2.13e-13!50;CL:0000117!5.30e-12!23;CL:0000337!5.30e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.16e-18,33;CL:0000047,8.16e-18,33;CL:0000031,8.16e-18,33;CL:0000404,8.16e-18,33;CL:0002319,4.30e-16,43;CL:0000221,4.70e-16,44;CL:0000133,4.70e-16,44;CL:0000393,1.04e-14,39;CL:0000211,1.04e-14,39;CL:0000117,1.08e-12,23;CL:0000337,1.08e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.35e-31!73;UBERON:0005743!2.35e-31!73;UBERON:0000073!4.22e-31!75;UBERON:0001016!4.22e-31!75;UBERON:0004121!8.32e-31!102;UBERON:0000924!8.32e-31!102;UBERON:0006601!8.32e-31!102;UBERON:0002346!2.43e-27!71;UBERON:0003075!2.43e-27!71;UBERON:0007284!2.43e-27!71;UBERON:0000033!7.55e-24!63;UBERON:0001049!1.97e-22!52;UBERON:0005068!1.97e-22!52;UBERON:0006241!1.97e-22!52;UBERON:0007135!1.97e-22!52;UBERON:0003056!3.84e-21!49;UBERON:0000955!5.96e-21!50;UBERON:0006238!5.96e-21!50;UBERON:0002616!2.26e-20!49;UBERON:0002020!2.88e-19!34;UBERON:0003080!1.67e-17!40;UBERON:0002780!4.44e-17!39;UBERON:0001890!4.44e-17!39;UBERON:0006240!4.44e-17!39;UBERON:0002791!1.68e-16!29;UBERON:0003528!1.68e-16!29;UBERON:0001893!1.68e-16!29;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0000468!2.87e-11!333;UBERON:0002619!2.57e-10!17;UBERON:0000153!3.47e-10!94;UBERON:0007811!1.57e-09!86;UBERON:0002021!3.47e-08!10;UBERON:0000411!3.47e-08!10;UBERON:0001950!3.47e-08!10;UBERON:0000922!3.79e-08!328;UBERON:0000025!4.59e-08!114;UBERON:0004111!8.47e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.85e-33,73;UBERON:0001016,1.26e-32,75;UBERON:0004121,6.42e-32,95;UBERON:0000924,6.42e-32,95;UBERON:0006601,6.42e-32,95;UBERON:0002346,3.28e-29,64;UBERON:0003075,3.28e-29,64;UBERON:0007284,3.28e-29,64;UBERON:0010314,1.18e-26,92;UBERON:0010371,3.26e-26,73;UBERON:0000073,2.65e-24,54;UBERON:0001049,2.17e-23,52;UBERON:0005068,2.17e-23,52;UBERON:0006241,2.17e-23,52;UBERON:0007135,2.17e-23,52;UBERON:0003056,1.93e-22,49;UBERON:0002020,1.93e-20,34;UBERON:0000955,2.03e-20,47;UBERON:0006238,2.03e-20,47;UBERON:0002616,8.22e-20,46;UBERON:0003080,1.47e-18,40;UBERON:0002780,4.17e-18,39;UBERON:0001890,4.17e-18,39;UBERON:0006240,4.17e-18,39;UBERON:0003528,1.72e-17,29;UBERON:0002791,1.72e-17,29;UBERON:0001893,1.72e-17,29;UBERON:0000956,2.26e-13,21;UBERON:0001869,2.26e-13,21;UBERON:0000203,2.26e-13,21;UBERON:0002619,6.76e-11,17;UBERON:0002021,1.26e-08,10;UBERON:0000411,1.26e-08,10;UBERON:0001950,1.26e-08,10 | |||
|phase1_expression=8.48788889655408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.917733760808408,0.782391344348039,2.39827672018491,3.07560655828261,4.86074747685709,1.39986421625363,1.43752564364972,0,0,0,2.57259436035947,7.16333599846892,0.515672092277442,10.9250888864183,8.99284664762456,6.97214543856797,0.338844532069132,0,0,0,0,2.69640099466564,4.61061966385865,11.3021677416241,11.4755047581937,11.9885227970288,8.2838785477103,6.18431914664518,9.43179153955146,6.90087391331302,5.51531271966013,6.60695285996332,6.38436690425939,8.75557239560588,12.3973110466382,11.161492519494,14.5855743755893,5.30447698102624,7.87867654044352,8.09830713217094,15.0260578591571,13.9524247183121,12.3023634244698,1.66597625333005,2.34271836331035,0,0,0,0,0,0,0.561777680527007,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.63286352971307,2.94925055502431,3.34912026143355,2.99800146432876,3.76806601381556,2.93971767839262,0.125666591329675,0,2.02439099687876,0,2.42650274921114,1.54589062922275,0.484875253135222,0,12.296793474485,13.1951425292477,0.255457055208591,0,0,0,7.33974133083631,8.23501085073528,8.79580464790051,13.5582969749976,17.1329356411321,8.3115217823824,10.5456820994042,3.25885964321012,0.373220911830279,0.252722758433675,1.05220927943237,7.41686524887411,6.66716102857071,10.9837899181263,9.94651797715719,10.6136938676071,12.4270308676304,10.2134879770104,6.20888089773638,4.52692785158969,4.72765200419548,3.34307135911503,2.19195732427575,5.00485048606076,1.39300866608867,3.08673204611915,1.79130840136644,0,0,0,1.24275463521301,2.11073453982987,1.98068267607116,1.89395788468168,1.18058539048442,1.85120535464854,1.39520366850245,1.3413670069981,1.75148013550754,1.6455984991348,3.94001913789829,2.91847714365081,2.04679982395465,1.97595103761946,1.07365135008297,10.9350773253346,12.657267322652,0.330418782983798,0,3.19932375802851,5.57368012465052,3.99489130098489,2.01683524623343,0.667134131534611,1.90225626112559,0,0.988193728344065,1.50801125280162,1.1937388322469,2.72949721966768,0.898819408654221,1.08069024937347,0,0.569003702859245,1.37098215131675,0,1.62921062276251,0.969762435838129,1.40271639780637,0.69560190836683,0,0.156998727841375,0,0,0.83422552858047,0.982794975566015,0.224862112384854,0.608580364165509,0.964708639009667,2.03700681425136,0.863088412352432,1.45921704097532,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.554259570499814,3.97931964718018,2.11854469374634,1.35796068620151,1.40814148973101,0.502518772325447,0.476087281772027,0.585400943573396,1.89162172927429,1.99318220683897,1.75400245523236,0.163863314715738,0.690739927463582,0.289298117163023,0,0,0,1.37968373152366,8.0275294993896,7.85318300167761,1.47541450839008,0.757412781613119,7.88770548540642,8.98009111882268,7.10897212518236,5.4962823529087,6.68396022247182,8.49229592366497,10.5250782435473,16.0740721851222,19.3691011193797,10.6036034419196,4.25820255624806,1.78065603667255,3.25773918707152,3.62934270539578,0,1.21390318077491,0.604647113929502,0.377210159511796,0.295301892880773,1.22974059177571,1.55056975900933,2.54473610634254,1.42598951353889,0.632073515871632,0,2.06271086496374,2.38307724027652,3.96134406868882,1.29358683782755,2.7863814554107,3.72414490648775,3.74574516964348,3.45552943264454,2.43571959291679,0.469343416127421,0,1.54369878638473,0.98931751764888,3.06782410722221,1.44751019827574,1.67121281604391,0.984845398470368,1.1659233465194,7.97328798645192,0.170870880797853,0.206386867963223,0.925972636848558,2.0720530270516,0.683471138605126,0.228778173206523,0,0,0,0,2.05618395827738,2.84647253977588,2.80813886136683,2.29997125615916,1.74690050996942,1.61837215661785,1.57041565878138,1.57053565190418,0.648074866458964,0,0,2.0932316446157,1.15820943319968,1.16670713006429,1.29159823477731,1.35164900392623,2.46450201156083,1.0416350787516,0.629156066554265,0.483168241652012,0.288030006257865,0,0.405450430580328,0.513554785824136,0.129920822977795,0.358053391334963,0,0,0.590758108698309,0.302899349844443,0.0762068066549998,0,0.38983152295901,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,1.50145980360946,2.56412273974171,3.42989406526505,0,15.8130515932779,20.714635642823,20.0513429703789,13.748254587495,21.2375581128899,24.9279986138601,14.1754725048679,15.7612421128477,17.672553950384,21.2281727818246,2.38710899443606,5.1873233542134,5.46347538413229,4.86213434136588,3.98265008993166,2.75765262675021,6.00066165064361,7.0051919461224,4.49286893428541,5.55933865880354,7.35089969681695,5.28153755881013,4.30750934361459,4.92993673517493,5.6286759576501,3.33405583898152,6.14186927507734,5.59436739344745,4.53294490883637,6.32955356577908,3.77156177623957,4.08194354166476,4.5302876089991,4.94177816549917,6.39943786824248,5.92302255241735,3.47563148458268,5.26139422875686,5.02475221229689,5.61142271657738,5.81311588808453,3.54616136552028,5.72923460437565,4.18329471202108,5.98010494041538,7.74412791607632,4.44470056046276,2.14871054048298,3.44318997723918,2.64709702943419,3.94175320554716 | |phase1_expression=8.48788889655408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.917733760808408,0.782391344348039,2.39827672018491,3.07560655828261,4.86074747685709,1.39986421625363,1.43752564364972,0,0,0,2.57259436035947,7.16333599846892,0.515672092277442,10.9250888864183,8.99284664762456,6.97214543856797,0.338844532069132,0,0,0,0,2.69640099466564,4.61061966385865,11.3021677416241,11.4755047581937,11.9885227970288,8.2838785477103,6.18431914664518,9.43179153955146,6.90087391331302,5.51531271966013,6.60695285996332,6.38436690425939,8.75557239560588,12.3973110466382,11.161492519494,14.5855743755893,5.30447698102624,7.87867654044352,8.09830713217094,15.0260578591571,13.9524247183121,12.3023634244698,1.66597625333005,2.34271836331035,0,0,0,0,0,0,0.561777680527007,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.63286352971307,2.94925055502431,3.34912026143355,2.99800146432876,3.76806601381556,2.93971767839262,0.125666591329675,0,2.02439099687876,0,2.42650274921114,1.54589062922275,0.484875253135222,0,12.296793474485,13.1951425292477,0.255457055208591,0,0,0,7.33974133083631,8.23501085073528,8.79580464790051,13.5582969749976,17.1329356411321,8.3115217823824,10.5456820994042,3.25885964321012,0.373220911830279,0.252722758433675,1.05220927943237,7.41686524887411,6.66716102857071,10.9837899181263,9.94651797715719,10.6136938676071,12.4270308676304,10.2134879770104,6.20888089773638,4.52692785158969,4.72765200419548,3.34307135911503,2.19195732427575,5.00485048606076,1.39300866608867,3.08673204611915,1.79130840136644,0,0,0,1.24275463521301,2.11073453982987,1.98068267607116,1.89395788468168,1.18058539048442,1.85120535464854,1.39520366850245,1.3413670069981,1.75148013550754,1.6455984991348,3.94001913789829,2.91847714365081,2.04679982395465,1.97595103761946,1.07365135008297,10.9350773253346,12.657267322652,0.330418782983798,0,3.19932375802851,5.57368012465052,3.99489130098489,2.01683524623343,0.667134131534611,1.90225626112559,0,0.988193728344065,1.50801125280162,1.1937388322469,2.72949721966768,0.898819408654221,1.08069024937347,0,0.569003702859245,1.37098215131675,0,1.62921062276251,0.969762435838129,1.40271639780637,0.69560190836683,0,0.156998727841375,0,0,0.83422552858047,0.982794975566015,0.224862112384854,0.608580364165509,0.964708639009667,2.03700681425136,0.863088412352432,1.45921704097532,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.554259570499814,3.97931964718018,2.11854469374634,1.35796068620151,1.40814148973101,0.502518772325447,0.476087281772027,0.585400943573396,1.89162172927429,1.99318220683897,1.75400245523236,0.163863314715738,0.690739927463582,0.289298117163023,0,0,0,1.37968373152366,8.0275294993896,7.85318300167761,1.47541450839008,0.757412781613119,7.88770548540642,8.98009111882268,7.10897212518236,5.4962823529087,6.68396022247182,8.49229592366497,10.5250782435473,16.0740721851222,19.3691011193797,10.6036034419196,4.25820255624806,1.78065603667255,3.25773918707152,3.62934270539578,0,1.21390318077491,0.604647113929502,0.377210159511796,0.295301892880773,1.22974059177571,1.55056975900933,2.54473610634254,1.42598951353889,0.632073515871632,0,2.06271086496374,2.38307724027652,3.96134406868882,1.29358683782755,2.7863814554107,3.72414490648775,3.74574516964348,3.45552943264454,2.43571959291679,0.469343416127421,0,1.54369878638473,0.98931751764888,3.06782410722221,1.44751019827574,1.67121281604391,0.984845398470368,1.1659233465194,7.97328798645192,0.170870880797853,0.206386867963223,0.925972636848558,2.0720530270516,0.683471138605126,0.228778173206523,0,0,0,0,2.05618395827738,2.84647253977588,2.80813886136683,2.29997125615916,1.74690050996942,1.61837215661785,1.57041565878138,1.57053565190418,0.648074866458964,0,0,2.0932316446157,1.15820943319968,1.16670713006429,1.29159823477731,1.35164900392623,2.46450201156083,1.0416350787516,0.629156066554265,0.483168241652012,0.288030006257865,0,0.405450430580328,0.513554785824136,0.129920822977795,0.358053391334963,0,0,0.590758108698309,0.302899349844443,0.0762068066549998,0,0.38983152295901,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,1.50145980360946,2.56412273974171,3.42989406526505,0,15.8130515932779,20.714635642823,20.0513429703789,13.748254587495,21.2375581128899,24.9279986138601,14.1754725048679,15.7612421128477,17.672553950384,21.2281727818246,2.38710899443606,5.1873233542134,5.46347538413229,4.86213434136588,3.98265008993166,2.75765262675021,6.00066165064361,7.0051919461224,4.49286893428541,5.55933865880354,7.35089969681695,5.28153755881013,4.30750934361459,4.92993673517493,5.6286759576501,3.33405583898152,6.14186927507734,5.59436739344745,4.53294490883637,6.32955356577908,3.77156177623957,4.08194354166476,4.5302876089991,4.94177816549917,6.39943786824248,5.92302255241735,3.47563148458268,5.26139422875686,5.02475221229689,5.61142271657738,5.81311588808453,3.54616136552028,5.72923460437565,4.18329471202108,5.98010494041538,7.74412791607632,4.44470056046276,2.14871054048298,3.44318997723918,2.64709702943419,3.94175320554716 | ||
|short_description=p6@Ank2 | |||
}} | }} |
Latest revision as of 14:02, 1 October 2015
Short description: | p6@Ank2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ank2_5end |
Coexpression cluster: | MCL_coexpression_mm9:826 |
Association with transcript: | -13bp_to_ENSMUST00000090335, ENSMUST00000171354, uc008rgv.1, uc008rgy.1, uc008rha.1, uc012cxg.1_5end |
EntrezGene: | Ank2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.16e-18 | 33 |
neuronal stem cell | 8.16e-18 | 33 |
neuroblast | 8.16e-18 | 33 |
electrically signaling cell | 8.16e-18 | 33 |
neural cell | 4.30e-16 | 43 |
ectodermal cell | 4.70e-16 | 44 |
neurectodermal cell | 4.70e-16 | 44 |
electrically responsive cell | 1.04e-14 | 39 |
electrically active cell | 1.04e-14 | 39 |
CNS neuron (sensu Vertebrata) | 1.08e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.85e-33 | 73 |
nervous system | 1.26e-32 | 75 |
ectoderm-derived structure | 6.42e-32 | 95 |
ectoderm | 6.42e-32 | 95 |
presumptive ectoderm | 6.42e-32 | 95 |
neurectoderm | 3.28e-29 | 64 |
neural plate | 3.28e-29 | 64 |
presumptive neural plate | 3.28e-29 | 64 |
structure with developmental contribution from neural crest | 1.18e-26 | 92 |
ecto-epithelium | 3.26e-26 | 73 |
regional part of nervous system | 2.65e-24 | 54 |
neural tube | 2.17e-23 | 52 |
neural rod | 2.17e-23 | 52 |
future spinal cord | 2.17e-23 | 52 |
neural keel | 2.17e-23 | 52 |
pre-chordal neural plate | 1.93e-22 | 49 |
gray matter | 1.93e-20 | 34 |
brain | 2.03e-20 | 47 |
future brain | 2.03e-20 | 47 |
regional part of brain | 8.22e-20 | 46 |
anterior neural tube | 1.47e-18 | 40 |
regional part of forebrain | 4.17e-18 | 39 |
forebrain | 4.17e-18 | 39 |
future forebrain | 4.17e-18 | 39 |
brain grey matter | 1.72e-17 | 29 |
regional part of telencephalon | 1.72e-17 | 29 |
telencephalon | 1.72e-17 | 29 |
cerebral cortex | 2.26e-13 | 21 |
cerebral hemisphere | 2.26e-13 | 21 |
pallium | 2.26e-13 | 21 |
regional part of cerebral cortex | 6.76e-11 | 17 |
occipital lobe | 1.26e-08 | 10 |
visual cortex | 1.26e-08 | 10 |
neocortex | 1.26e-08 | 10 |