FFCP PHASE1:Mm9::chr3:127111904..127111926,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:127111904..127111926,- to FFCP PHASE1:Mm9::chr3:127111904..127111926,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109676 | |EntrezGene=109676 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9PW46,Q8C8R3 | |UniProt=E9PW46,Q8C8R3 | ||
|association_with_transcript=22bp_to_ENSMUST00000090335,ENSMUST00000171354,uc008rgv.1,uc008rgy.1,uc008rha.1,uc012cxg.1_5end | |||
|cluster_id=chr3:127111904..127111926,- | |||
|description=CAGE_peak_3_at_Ank2_5end | |||
|id=chr3:127111904..127111926,- | |||
|ontology_enrichment_celltype=CL:0000540!5.45e-16!33;CL:0000047!5.45e-16!33;CL:0000031!5.45e-16!33;CL:0000404!5.45e-16!33;CL:0002319!2.82e-15!43;CL:0000221!3.33e-15!44;CL:0000133!3.33e-15!44;CL:0000393!4.87e-14!39;CL:0000211!4.87e-14!39;CL:0000055!5.36e-13!50;CL:0000117!4.08e-11!23;CL:0000337!4.08e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.74e-16,33;CL:0000047,1.74e-16,33;CL:0000031,1.74e-16,33;CL:0000404,1.74e-16,33;CL:0002319,9.53e-16,43;CL:0000221,1.13e-15,44;CL:0000133,1.13e-15,44;CL:0000393,1.82e-14,39;CL:0000211,1.82e-14,39;CL:0000117,1.92e-11,23;CL:0000337,1.92e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.19e-34!102;UBERON:0000924!7.19e-34!102;UBERON:0006601!7.19e-34!102;UBERON:0001017!1.28e-31!73;UBERON:0005743!1.28e-31!73;UBERON:0000073!3.20e-31!75;UBERON:0001016!3.20e-31!75;UBERON:0002346!8.56e-30!71;UBERON:0003075!8.56e-30!71;UBERON:0007284!8.56e-30!71;UBERON:0000033!6.80e-26!63;UBERON:0001049!9.76e-23!52;UBERON:0005068!9.76e-23!52;UBERON:0006241!9.76e-23!52;UBERON:0007135!9.76e-23!52;UBERON:0003056!2.57e-22!49;UBERON:0000955!1.88e-21!50;UBERON:0006238!1.88e-21!50;UBERON:0002616!5.82e-21!49;UBERON:0002020!6.86e-19!34;UBERON:0003080!1.56e-17!40;UBERON:0002780!4.81e-17!39;UBERON:0001890!4.81e-17!39;UBERON:0006240!4.81e-17!39;UBERON:0002791!2.53e-16!29;UBERON:0003528!2.53e-16!29;UBERON:0001893!2.53e-16!29;UBERON:0000956!7.40e-13!21;UBERON:0001869!7.40e-13!21;UBERON:0000203!7.40e-13!21;UBERON:0000153!2.51e-11!94;UBERON:0002619!9.61e-11!17;UBERON:0007811!1.03e-10!86;UBERON:0000468!3.66e-10!333;UBERON:0002021!3.03e-08!10;UBERON:0000411!3.03e-08!10;UBERON:0001950!3.03e-08!10;UBERON:0000922!4.35e-07!328;UBERON:0004111!7.18e-07!122;UBERON:0000025!8.31e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.01e-34,95;UBERON:0000924,4.01e-34,95;UBERON:0006601,4.01e-34,95;UBERON:0001017,1.18e-32,73;UBERON:0001016,3.03e-32,75;UBERON:0002346,1.50e-30,64;UBERON:0003075,1.50e-30,64;UBERON:0007284,1.50e-30,64;UBERON:0010371,7.75e-29,73;UBERON:0010314,1.70e-28,92;UBERON:0000073,1.76e-24,54;UBERON:0001049,1.82e-23,52;UBERON:0005068,1.82e-23,52;UBERON:0006241,1.82e-23,52;UBERON:0007135,1.82e-23,52;UBERON:0003056,4.96e-23,49;UBERON:0000955,1.65e-20,47;UBERON:0006238,1.65e-20,47;UBERON:0002616,5.21e-20,46;UBERON:0002020,1.74e-19,34;UBERON:0003080,4.40e-18,40;UBERON:0002780,1.41e-17,39;UBERON:0001890,1.41e-17,39;UBERON:0006240,1.41e-17,39;UBERON:0003528,7.87e-17,29;UBERON:0002791,7.87e-17,29;UBERON:0001893,7.87e-17,29;UBERON:0000956,3.03e-13,21;UBERON:0001869,3.03e-13,21;UBERON:0000203,3.03e-13,21;UBERON:0002619,4.65e-11,17;UBERON:0002021,1.78e-08,10;UBERON:0000411,1.78e-08,10;UBERON:0001950,1.78e-08,10 | |||
|phase1_expression=14.4133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.62203089951223,1.46837401729345,2.34717403304412,3.70642765846759,11.643367684927,14.387812531497,1.95980990275508,1.43752564364972,0,0,0,3.34437266846731,11.747871037489,1.54701627683233,13.9598357993122,13.2247744818008,12.0427966666174,2.03306719241479,0.889294796111139,0,1.97773272513395,0,6.89080254192331,14.2160772968975,26.6482303632788,19.7108669964268,22.9254207873006,17.7103610330358,24.2955395046775,16.4137670948038,12.6516021744072,8.27296907949019,18.7196997698961,25.2820929408672,21.0440950561054,18.8597391454177,14.729510619988,19.7947080811569,12.0048689570594,26.449842671489,26.2812986176113,23.5702868378934,32.1759998605973,18.2671456908795,2.65041676666144,4.00529268565963,0.289864488701678,0,0,0,0,0,1.82577746171277,0,0,0,4.08445917352373,0,0,0,0,0,0,1.25602267690966,1.03575153458869,3.56261133755579,5.55153045651635,6.08930956624282,5.5347719341454,7.08396410597326,13.2875239063346,1.50799909595611,0,8.09756398751505,0,3.88240439873782,1.76673214768315,2.90925151881133,0,40.4037499875935,45.6593820853332,0.766371165625774,0,0,0,20.8208988772704,11.4375150704657,22.240820323977,43.1084314076846,53.7002460393694,22.0255327233134,34.0706652442291,5.49932564791708,2.23932547098167,0.252722758433675,7.99679052368601,17.3060189140396,20.2313851901456,23.9482632641114,36.6212707340788,37.2159650357763,33.8220221552003,27.1735001223214,21.7310831420773,4.31135985865684,4.72765200419548,6.15828934573821,3.06874025398605,9.45360647367033,5.57203466435466,6.1734640922383,2.7864797354589,0,0,0,2.07125772535502,1.64168241986767,2.52086886045421,1.89395788468168,2.36117078096885,4.16521204795921,2.55787339225449,2.14618721119695,2.56883753207773,3.94943639792353,5.91002870684743,5.02626619184305,4.82459958503597,4.17145219052996,3.89198614405078,30.7023324903626,30.5626698766475,0,0.264450566663544,6.39864751605702,6.96710015581316,4.25262622362908,3.42861991859682,3.33567065767305,3.42406127002606,2.84717436926707,3.62337700392824,2.76468729680296,4.37704238490532,3.31438948102504,0.898819408654221,1.51296634912286,2.58883655230677,0.569003702859245,3.19895835307241,1.1270773567308,1.83286195060783,1.35766741017338,1.82353131714828,0.505892296994058,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.405720242777006,0,0.763877555344259,0.287696137450811,1.13494658742525,0.823684239564244,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0.554259570499814,2.84237117655727,4.4000543639347,2.20668611507745,0.938760993154008,0.837531287209079,0.476087281772027,0.585400943573396,2.20689201748667,2.87904096543407,3.82691444777969,1.14704320301017,1.38147985492716,0.578596234326046,0,0,0,1.93155722413313,21.3532284683763,27.3103229759833,2.95082901678016,4.79694761688309,15.4599027513966,26.5498346121714,24.3428439438063,11.4705023017225,17.1554979043443,22.6461224631066,23.074209995469,38.8700291022045,40.7146411284919,18.9579576688866,4.5420827266646,2.49291845134157,6.51547837414304,7.58862565673663,2.65490276679926,1.45668381692989,0.302323556964751,1.50884063804718,0.885905678642318,0.922305443831782,4.9101375701962,3.27180356529755,2.85197902707777,4.42451461110142,1.05418608574999,1.03135543248187,5.10659408630682,8.10274923140896,2.97524972700335,6.00143698088458,4.07882537377229,5.17269571046005,5.92376474167636,5.17590413494819,1.17335854031855,0.21183207086382,3.30792597082443,3.46261131177108,5.16686165426898,4.52346936961169,3.46179797609096,2.79039529566604,2.91480836629851,27.8137953015765,0.170870880797853,0.82554747185289,2.03713980106683,1.88368457004691,0.546776910884101,0,0.169978429993855,0.139951452323658,0,0,2.68885594543965,3.86306987541013,5.29226170026826,4.18176592028937,3.9305261474312,5.25970950900801,5.2898211664215,2.6175594198403,1.55537967950151,0.621339313086926,0,1.49516546043979,1.32366792365678,1.36115831840833,1.16243841129958,1.18269287843545,3.0512882047896,1.95306577265925,0.943734099831398,0,0.576060012515731,0,1.21635129174099,1.33524244314275,0.51968329191118,0.716106782669926,0,0.120195449519969,0.443068581523732,0.706765149637033,0,0.504130925684203,0.487289403698762,0.288635524920988,0.233753804363138,3.40095575422817,0,0,0,3.28422309854724,2.62755465631655,6.77661009788881,4.28736758158132,0.501572104035363,50.827665835536,62.1439069284689,68.7474616127276,51.72780788545,67.8231694572936,54.3883606120584,59.4019800203989,52.2372595740096,46.2205257163889,54.3648327339411,3.21740777510948,3.99024873401031,8.02447947044431,7.53630822911712,4.82110274044359,5.1476182366004,6.00066165064361,9.06554251851134,7.70206103020357,9.09709962349671,7.85785829659743,7.1678009726709,11.0496978814461,10.5641501468034,11.6019647290339,6.19181798667996,10.6613579869267,9.06673336179414,8.24171801606613,9.86232764900462,8.5717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| ||
|short_description=p3@Ank2 | |||
}} | }} |
Latest revision as of 14:02, 1 October 2015
Short description: | p3@Ank2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ank2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 22bp_to_ENSMUST00000090335, ENSMUST00000171354, uc008rgv.1, uc008rgy.1, uc008rha.1, uc012cxg.1_5end |
EntrezGene: | Ank2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.74e-16 | 33 |
neuronal stem cell | 1.74e-16 | 33 |
neuroblast | 1.74e-16 | 33 |
electrically signaling cell | 1.74e-16 | 33 |
neural cell | 9.53e-16 | 43 |
ectodermal cell | 1.13e-15 | 44 |
neurectodermal cell | 1.13e-15 | 44 |
electrically responsive cell | 1.82e-14 | 39 |
electrically active cell | 1.82e-14 | 39 |
CNS neuron (sensu Vertebrata) | 1.92e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.01e-34 | 95 |
ectoderm | 4.01e-34 | 95 |
presumptive ectoderm | 4.01e-34 | 95 |
central nervous system | 1.18e-32 | 73 |
nervous system | 3.03e-32 | 75 |
neurectoderm | 1.50e-30 | 64 |
neural plate | 1.50e-30 | 64 |
presumptive neural plate | 1.50e-30 | 64 |
ecto-epithelium | 7.75e-29 | 73 |
structure with developmental contribution from neural crest | 1.70e-28 | 92 |
regional part of nervous system | 1.76e-24 | 54 |
neural tube | 1.82e-23 | 52 |
neural rod | 1.82e-23 | 52 |
future spinal cord | 1.82e-23 | 52 |
neural keel | 1.82e-23 | 52 |
pre-chordal neural plate | 4.96e-23 | 49 |
brain | 1.65e-20 | 47 |
future brain | 1.65e-20 | 47 |
regional part of brain | 5.21e-20 | 46 |
gray matter | 1.74e-19 | 34 |
anterior neural tube | 4.40e-18 | 40 |
regional part of forebrain | 1.41e-17 | 39 |
forebrain | 1.41e-17 | 39 |
future forebrain | 1.41e-17 | 39 |
brain grey matter | 7.87e-17 | 29 |
regional part of telencephalon | 7.87e-17 | 29 |
telencephalon | 7.87e-17 | 29 |
cerebral cortex | 3.03e-13 | 21 |
cerebral hemisphere | 3.03e-13 | 21 |
pallium | 3.03e-13 | 21 |
regional part of cerebral cortex | 4.65e-11 | 17 |
occipital lobe | 1.78e-08 | 10 |
visual cortex | 1.78e-08 | 10 |
neocortex | 1.78e-08 | 10 |