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FFCP PHASE1:Mm9::chr2:53937900..53937952,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:53937900..53937952,-
|DHSsupport=NA
|short_description=p1@Rprm
|DPIdataset=NA
|description=CAGE_peak_1_at_Rprm_5end
|association_with_transcript=10bp_to_ENSMUST00000100089,NM_023396,uc008jrp.1_5end
|EntrezGene=67874
|EntrezGene=67874
|HGNC=
|HGNC=
|MCL_coexpression_id=950
|TSSclassifier=NA
|UniProt=Q9JJ72
|UniProt=Q9JJ72
|association_with_transcript=10bp_to_ENSMUST00000100089,NM_023396,uc008jrp.1_5end
|cluster_id=chr2:53937900..53937952,-
|description=CAGE_peak_1_at_Rprm_5end
|id=chr2:53937900..53937952,-
|ontology_enrichment_celltype=CL:0000221!1.53e-16!44;CL:0000133!1.53e-16!44;CL:0002319!6.77e-16!43;CL:0000055!1.34e-13!50;CL:0000540!1.35e-13!33;CL:0000047!1.35e-13!33;CL:0000031!1.35e-13!33;CL:0000404!1.35e-13!33;CL:0000117!7.79e-13!23;CL:0000337!7.79e-13!23;CL:0000393!5.50e-12!39;CL:0000211!5.50e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.30e-17,44;CL:0000133,1.30e-17,44;CL:0002319,6.56e-17,43;CL:0000540,9.94e-15,33;CL:0000047,9.94e-15,33;CL:0000031,9.94e-15,33;CL:0000404,9.94e-15,33;CL:0000117,6.79e-14,23;CL:0000337,6.79e-14,23;CL:0000393,3.80e-13,39;CL:0000211,3.80e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.23e-30!73;UBERON:0005743!2.23e-30!73;UBERON:0000073!8.86e-30!75;UBERON:0001016!8.86e-30!75;UBERON:0001049!6.06e-24!52;UBERON:0005068!6.06e-24!52;UBERON:0006241!6.06e-24!52;UBERON:0007135!6.06e-24!52;UBERON:0004121!6.29e-24!102;UBERON:0000924!6.29e-24!102;UBERON:0006601!6.29e-24!102;UBERON:0000033!5.36e-23!63;UBERON:0002346!1.26e-22!71;UBERON:0003075!1.26e-22!71;UBERON:0007284!1.26e-22!71;UBERON:0003056!1.93e-22!49;UBERON:0000955!7.84e-22!50;UBERON:0006238!7.84e-22!50;UBERON:0002780!1.28e-21!39;UBERON:0001890!1.28e-21!39;UBERON:0006240!1.28e-21!39;UBERON:0003080!1.35e-21!40;UBERON:0002616!2.47e-21!49;UBERON:0002020!2.34e-20!34;UBERON:0002791!3.08e-17!29;UBERON:0003528!3.08e-17!29;UBERON:0001893!3.08e-17!29;UBERON:0000956!5.32e-14!21;UBERON:0001869!5.32e-14!21;UBERON:0000203!5.32e-14!21;UBERON:0002619!2.60e-11!17;UBERON:0000153!2.79e-11!94;UBERON:0007811!1.88e-10!86;UBERON:0002021!4.52e-08!10;UBERON:0000411!4.52e-08!10;UBERON:0001950!4.52e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.56e-32,73;UBERON:0001016,4.58e-31,75;UBERON:0002346,5.59e-26,64;UBERON:0003075,5.59e-26,64;UBERON:0007284,5.59e-26,64;UBERON:0000073,9.95e-26,54;UBERON:0004121,1.45e-25,95;UBERON:0000924,1.45e-25,95;UBERON:0006601,1.45e-25,95;UBERON:0001049,5.16e-25,52;UBERON:0005068,5.16e-25,52;UBERON:0006241,5.16e-25,52;UBERON:0007135,5.16e-25,52;UBERON:0003056,6.89e-24,49;UBERON:0002780,1.65e-23,39;UBERON:0001890,1.65e-23,39;UBERON:0006240,1.65e-23,39;UBERON:0003080,1.74e-23,40;UBERON:0000955,3.64e-22,47;UBERON:0006238,3.64e-22,47;UBERON:0002020,3.96e-22,34;UBERON:0010371,7.89e-22,73;UBERON:0002616,1.25e-21,46;UBERON:0003528,1.03e-18,29;UBERON:0002791,1.03e-18,29;UBERON:0001893,1.03e-18,29;UBERON:0000956,3.60e-15,21;UBERON:0001869,3.60e-15,21;UBERON:0000203,3.60e-15,21;UBERON:0010314,5.15e-14,92;UBERON:0002619,3.16e-12,17;UBERON:0002021,1.10e-08,10;UBERON:0000411,1.10e-08,10;UBERON:0001950,1.10e-08,10
|phase1_expression=64.3798365361272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,4.67738095830884,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.02753862439029,1.46837401729345,3.9119567217402,14.6076854774899,21.7489320907127,17.4986909166855,5.73944328663986,18.6878333674463,0,0,0,1.28629718017973,0,5.15672092277442,38.0354946416044,49.7251520515711,35.494558596346,16.9422266034566,5.33576877666684,0.899899717281399,0,0,19.4740071836963,24.974189845901,83.1590690713991,102.469507193753,95.0668825308247,31.992910253226,32.025938437984,49.8537552804863,42.9387710161699,40.4456266108409,2.20231761998777,9.95961237064464,8.44835932909339,35.2136388239618,37.3269585897831,40.6312429034273,4.74611098302348,36.5795696520592,31.1708425464693,44.7835449919975,36.7318936461686,75.4917755592467,0.530083353332288,2.49386148352392,0,0,0.679971333707751,0,0,0,1.96622188184453,0,0,0,55.2106205524588,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,3.46970653532272,0.913396434936424,1.38369298353635,1.3565037649736,1.64624189989987,0,0,0,0,0.323533699894818,0,0,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,0.11981512450592,0,0,5.39246301857362,6.8625090422794,14.3245961408665,30.9407289942252,27.872984849006,7.2725815595846,13.7905073607594,10.9986512958342,7.83763914843586,22.9977710174644,0.841767423545896,12.1012011955314,12.1848115349741,7.02242306240862,7.53524089178575,6.5995404176788,6.02134485338794,5.71580519814346,3.88055056108524,8.191583731448,9.26619792822314,20.9381837755099,10.7405908889512,5.28289773528636,1.39300866608867,1.4404749548556,5.57295947091781,0,0,0,0.621377317606506,0.234526059981096,0,0.946978942340841,0,0.462801338662135,0.232533944750408,0,0,0,0.492502392237286,0.0810688095458557,0,0.219550115291051,0,9.67333763394985,14.5095503454791,0,0,3.83918850963421,2.09013004674395,1.03093969057675,0.605050573870028,1.77902435075896,0.951128130562796,0,0.823494773620054,1.50801125280162,1.1937388322469,1.75467678407208,0,0.648414149624083,0.199141273254367,26.3638382324784,15.8805432527523,18.0332377076929,10.386217720111,9.11576689687841,8.34616256694791,1.89709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,3.03186258832776,0.651859905768103,1.18821560042632,1.17345124144251,0.670025029767263,1.90434912708811,1.75620283072019,0.788175720530955,1.10732344824387,0.318909537314974,0.983179888294428,0.518054945597687,1.73578870297814,0,0,0,0,4.49541651965817,3.6335622843583,0,0,4.10160685241134,4.68526493155966,3.87762115919038,2.38968797952552,3.7875774594007,2.83076530788832,5.66734982344852,13.151513606009,8.69633111482352,17.9939937196212,2.6968616189571,1.95872164033981,2.11753047159649,9.23832688646199,2.65490276679926,8.25454162926937,10.5813244937663,9.8074641473067,6.79194353625777,3.07435147943927,2.06742634534577,1.09060118843252,1.78248689192361,2.84433082142234,2.10837217149998,3.09406629744561,13.2771446243977,9.54323798365944,23.1552043971131,47.1541477069503,29.4384787846174,22.831208653065,19.2522354104482,13.700922710157,0.938686832254841,0,1.32317038832977,0,0.968786560175433,0.542816324353403,0.954978752025092,0.164140899745061,0,2.59595422814714,0.170870880797853,3.714963623338,1.85194527369712,0.188368457004691,0.136694227721025,0,0.679913719975421,0.419854356970974,0.276399947608848,0,5.53587988766987,4.26970880966382,2.37611749807963,1.46361807210128,2.40198820120795,1.34864346384821,0.991841468704031,0,0.90730481304255,0.621339313086926,0,0.448549638131936,0,0.583353565032143,1.54991788173277,1.35164900392623,0.58678619322877,1.8228613878153,0,0,0.288030006257865,0,0.608175645870493,0.616265742988964,0.649604114888975,0.179026695667481,0.596044064343795,0.120195449519969,0.443068581523732,0,0,0.100826185136841,0.38983152295901,0.192423683280659,0.233753804363138,0,0.665957860122194,0.358855426437903,0.839423081820392,0.386379188064381,20.4573898241788,12.8206136987086,1.07184189539533,2.00628841614145,71.1587321697504,92.0650473014354,84.7885359890307,59.8049074556033,66.4530044177523,61.1869056885657,64.8021600222534,56.2901504030276,50.2988073972467,50.2227502399265,13.1809931431904,15.9609949360412,14.3416228833473,7.05009479498053,10.8998844566551,8.45680138870065,9.11211583986622,5.97501665992793,7.38114182061175,6.82282471762253,8.61829619626815,6.60192194851267,6.08669798554236,5.8262888688431,6.54764346093991,8.09699275181225,5.91010062318763,5.59436739344745,7.00546031365621,9.56792980873583,6.85738504770831,7.0990322463735,8.34526664815623,7.55801366488108,7.62285981364178,6.09225176820071,7.68297486065645,4.99832451731901,6.24698923690964,7.85599180320834,8.06718123244384,6.99381824866501,6.13846564754534,7.43696837692637,6.55882477335881,15.9878769880285,5.6143586026898,6.44613162144895,3.63447830930802,1.32354851471709,1.62307484934295
|phase1_expression=64.3798365361272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,4.67738095830884,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.02753862439029,1.46837401729345,3.9119567217402,14.6076854774899,21.7489320907127,17.4986909166855,5.73944328663986,18.6878333674463,0,0,0,1.28629718017973,0,5.15672092277442,38.0354946416044,49.7251520515711,35.494558596346,16.9422266034566,5.33576877666684,0.899899717281399,0,0,19.4740071836963,24.974189845901,83.1590690713991,102.469507193753,95.0668825308247,31.992910253226,32.025938437984,49.8537552804863,42.9387710161699,40.4456266108409,2.20231761998777,9.95961237064464,8.44835932909339,35.2136388239618,37.3269585897831,40.6312429034273,4.74611098302348,36.5795696520592,31.1708425464693,44.7835449919975,36.7318936461686,75.4917755592467,0.530083353332288,2.49386148352392,0,0,0.679971333707751,0,0,0,1.96622188184453,0,0,0,55.2106205524588,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,3.46970653532272,0.913396434936424,1.38369298353635,1.3565037649736,1.64624189989987,0,0,0,0,0.323533699894818,0,0,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,0.11981512450592,0,0,5.39246301857362,6.8625090422794,14.3245961408665,30.9407289942252,27.872984849006,7.2725815595846,13.7905073607594,10.9986512958342,7.83763914843586,22.9977710174644,0.841767423545896,12.1012011955314,12.1848115349741,7.02242306240862,7.53524089178575,6.5995404176788,6.02134485338794,5.71580519814346,3.88055056108524,8.191583731448,9.26619792822314,20.9381837755099,10.7405908889512,5.28289773528636,1.39300866608867,1.4404749548556,5.57295947091781,0,0,0,0.621377317606506,0.234526059981096,0,0.946978942340841,0,0.462801338662135,0.232533944750408,0,0,0,0.492502392237286,0.0810688095458557,0,0.219550115291051,0,9.67333763394985,14.5095503454791,0,0,3.83918850963421,2.09013004674395,1.03093969057675,0.605050573870028,1.77902435075896,0.951128130562796,0,0.823494773620054,1.50801125280162,1.1937388322469,1.75467678407208,0,0.648414149624083,0.199141273254367,26.3638382324784,15.8805432527523,18.0332377076929,10.386217720111,9.11576689687841,8.34616256694791,1.89709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,3.03186258832776,0.651859905768103,1.18821560042632,1.17345124144251,0.670025029767263,1.90434912708811,1.75620283072019,0.788175720530955,1.10732344824387,0.318909537314974,0.983179888294428,0.518054945597687,1.73578870297814,0,0,0,0,4.49541651965817,3.6335622843583,0,0,4.10160685241134,4.68526493155966,3.87762115919038,2.38968797952552,3.7875774594007,2.83076530788832,5.66734982344852,13.151513606009,8.69633111482352,17.9939937196212,2.6968616189571,1.95872164033981,2.11753047159649,9.23832688646199,2.65490276679926,8.25454162926937,10.5813244937663,9.8074641473067,6.79194353625777,3.07435147943927,2.06742634534577,1.09060118843252,1.78248689192361,2.84433082142234,2.10837217149998,3.09406629744561,13.2771446243977,9.54323798365944,23.1552043971131,47.1541477069503,29.4384787846174,22.831208653065,19.2522354104482,13.700922710157,0.938686832254841,0,1.32317038832977,0,0.968786560175433,0.542816324353403,0.954978752025092,0.164140899745061,0,2.59595422814714,0.170870880797853,3.714963623338,1.85194527369712,0.188368457004691,0.136694227721025,0,0.679913719975421,0.419854356970974,0.276399947608848,0,5.53587988766987,4.26970880966382,2.37611749807963,1.46361807210128,2.40198820120795,1.34864346384821,0.991841468704031,0,0.90730481304255,0.621339313086926,0,0.448549638131936,0,0.583353565032143,1.54991788173277,1.35164900392623,0.58678619322877,1.8228613878153,0,0,0.288030006257865,0,0.608175645870493,0.616265742988964,0.649604114888975,0.179026695667481,0.596044064343795,0.120195449519969,0.443068581523732,0,0,0.100826185136841,0.38983152295901,0.192423683280659,0.233753804363138,0,0.665957860122194,0.358855426437903,0.839423081820392,0.386379188064381,20.4573898241788,12.8206136987086,1.07184189539533,2.00628841614145,71.1587321697504,92.0650473014354,84.7885359890307,59.8049074556033,66.4530044177523,61.1869056885657,64.8021600222534,56.2901504030276,50.2988073972467,50.2227502399265,13.1809931431904,15.9609949360412,14.3416228833473,7.05009479498053,10.8998844566551,8.45680138870065,9.11211583986622,5.97501665992793,7.38114182061175,6.82282471762253,8.61829619626815,6.60192194851267,6.08669798554236,5.8262888688431,6.54764346093991,8.09699275181225,5.91010062318763,5.59436739344745,7.00546031365621,9.56792980873583,6.85738504770831,7.0990322463735,8.34526664815623,7.55801366488108,7.62285981364178,6.09225176820071,7.68297486065645,4.99832451731901,6.24698923690964,7.85599180320834,8.06718123244384,6.99381824866501,6.13846564754534,7.43696837692637,6.55882477335881,15.9878769880285,5.6143586026898,6.44613162144895,3.63447830930802,1.32354851471709,1.62307484934295
|short_description=p1@Rprm
}}
}}

Latest revision as of 18:47, 26 September 2015

Short description:p1@Rprm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rprm_5end
Coexpression cluster:MCL_coexpression_mm9:950
Association with transcript: 10bp_to_ENSMUST00000100089, NM_023396, uc008jrp.1_5end
EntrezGene:Rprm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rprm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G764.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.75
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C338.04
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C735.49
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C819.47
Mouse Microglia, donor2.CNhs12634.11736-123E824.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D583.16
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5102.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D995.07
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.85
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F242.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D644.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F636.73
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E175.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G655.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D530.94
cortex, neonate N30.CNhs11107.1392-42F227.87
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B213.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.84
epididymis, adult.CNhs10490.58-23B223.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E28.19
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E220.94
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G114.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F815.88
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G78.35
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F210.58
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C723.16
pituitary gland, embryo E14.CNhs11037.398-44A547.15
pituitary gland, embryo E15.CNhs10592.427-16B929.44
pituitary gland, embryo E16.CNhs11036.449-43F622.83
pituitary gland, embryo E17.CNhs11039.1265-44F519.25
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F520.46
uterus, adult.CNhs10509.92-27E512.82
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A171.16
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A292.07
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A384.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A466.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A664.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A756.29
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.22
whole body, embryo E11.CNhs11014.324-5I813.18
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H214.34
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.30e-1744
neurectodermal cell1.30e-1744
neural cell6.56e-1743
neuron9.94e-1533
neuronal stem cell9.94e-1533
neuroblast9.94e-1533
electrically signaling cell9.94e-1533
CNS neuron (sensu Vertebrata)6.79e-1423
neuroblast (sensu Vertebrata)6.79e-1423
electrically responsive cell3.80e-1339
electrically active cell3.80e-1339

Uber anatomy
Ontology termp-valuen
central nervous system4.56e-3273
nervous system4.58e-3175
neurectoderm5.59e-2664
neural plate5.59e-2664
presumptive neural plate5.59e-2664
regional part of nervous system9.95e-2654
ectoderm-derived structure1.45e-2595
ectoderm1.45e-2595
presumptive ectoderm1.45e-2595
neural tube5.16e-2552
neural rod5.16e-2552
future spinal cord5.16e-2552
neural keel5.16e-2552
pre-chordal neural plate6.89e-2449
regional part of forebrain1.65e-2339
forebrain1.65e-2339
future forebrain1.65e-2339
anterior neural tube1.74e-2340
brain3.64e-2247
future brain3.64e-2247
gray matter3.96e-2234
ecto-epithelium7.89e-2273
regional part of brain1.25e-2146
brain grey matter1.03e-1829
regional part of telencephalon1.03e-1829
telencephalon1.03e-1829
cerebral cortex3.60e-1521
cerebral hemisphere3.60e-1521
pallium3.60e-1521
structure with developmental contribution from neural crest5.15e-1492
regional part of cerebral cortex3.16e-1217
occipital lobe1.10e-0810
visual cortex1.10e-0810
neocortex1.10e-0810
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