FFCP PHASE1:Mm9::chr2:37559365..37559405,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:37559365..37559405,- to FFCP PHASE1:Mm9::chr2:37559365..37559405,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20744 | |EntrezGene=20744 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2BH83 | |UniProt=A2BH83 | ||
|association_with_transcript=0bp_to_ENSMUST00000155237_5end | |||
|cluster_id=chr2:37559365..37559405,- | |||
|description=CAGE_peak_2_at_Strbp_5end | |||
|id=chr2:37559365..37559405,- | |||
|ontology_enrichment_celltype=CL:0000117!2.97e-07!23;CL:0000337!2.97e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-07,23;CL:0000337,2.10e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.81e-17!63;UBERON:0001049!3.88e-16!52;UBERON:0005068!3.88e-16!52;UBERON:0006241!3.88e-16!52;UBERON:0007135!3.88e-16!52;UBERON:0000955!2.82e-15!50;UBERON:0006238!2.82e-15!50;UBERON:0003056!5.81e-15!49;UBERON:0002616!1.02e-14!49;UBERON:0002346!1.05e-13!71;UBERON:0003075!1.05e-13!71;UBERON:0007284!1.05e-13!71;UBERON:0003080!6.54e-13!40;UBERON:0007811!1.21e-12!86;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0001017!1.87e-11!73;UBERON:0005743!1.87e-11!73;UBERON:0002020!2.18e-11!34;UBERON:0000153!2.20e-10!94;UBERON:0000073!2.52e-10!75;UBERON:0001016!2.52e-10!75;UBERON:0002791!5.84e-09!29;UBERON:0003528!5.84e-09!29;UBERON:0001893!5.84e-09!29;UBERON:0004121!3.31e-08!102;UBERON:0000924!3.31e-08!102;UBERON:0006601!3.31e-08!102;UBERON:0002021!1.55e-07!10;UBERON:0000411!1.55e-07!10;UBERON:0001950!1.55e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.75e-18,54;UBERON:0001049,4.88e-17,52;UBERON:0005068,4.88e-17,52;UBERON:0006241,4.88e-17,52;UBERON:0007135,4.88e-17,52;UBERON:0002346,8.85e-17,64;UBERON:0003075,8.85e-17,64;UBERON:0007284,8.85e-17,64;UBERON:0003056,1.78e-15,49;UBERON:0000955,1.71e-14,47;UBERON:0006238,1.71e-14,47;UBERON:0002616,6.26e-14,46;UBERON:0010371,1.21e-13,73;UBERON:0003080,2.26e-13,40;UBERON:0002780,5.84e-13,39;UBERON:0001890,5.84e-13,39;UBERON:0006240,5.84e-13,39;UBERON:0001017,5.39e-12,73;UBERON:0002020,8.24e-12,34;UBERON:0001016,7.19e-11,75;UBERON:0004121,1.28e-09,95;UBERON:0000924,1.28e-09,95;UBERON:0006601,1.28e-09,95;UBERON:0003528,2.62e-09,29;UBERON:0002791,2.62e-09,29;UBERON:0001893,2.62e-09,29;UBERON:0010314,2.37e-08,92;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10 | |||
|phase1_expression=8.96833543786846,4.88565570695105,3.18499467572675,4.23449895829562,3.50627010962443,4.19698179779725,3.73780224952841,0,1.40788722151667,1.40438715793196,2.05461561870606,3.43020283679947,1.19840510951844,0.437102012094987,1.99865857089398,1.21485160433896,0,5.8360500591274,7.81552271552711,3.81950686618227,2.29616883407888,1.29078236561151,0.522399578277871,4.15980299262857,3.89995777814189,1.72269589234506,3.87685796543167,3.23206849028834,2.66032787238923,4.78857246543868,2.43903561720835,0,0,0,1.73310971850765,2.32728503501889,3.26670970019791,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.734187008646726,0,0,0,0.388859798148567,0.419959264876088,0,5.5368259999053,0.725362142011344,0.336093799142464,0.514518872071894,0,0,2.83243045203437,2.11596391708813,3.80298842103708,0,0,0,0,0.7104801149461,0,0.384218305321555,1.97010263386108,2.16009501330705,2.73422449756797,3.71346279724945,3.75476519617743,1.83736198822431,1.53352753629178,2.75765635983006,6.60695285996332,5.87361755191863,6.29786786350598,5.67111037239834,5.6722339033494,5.2091337055676,3.90856198601933,3.93933827022176,3.20876320331301,10.0173719061047,11.10499110233,9.13357284543973,0.302904773332736,0.0755715601067855,1.73918693221007,2.58127163094416,2.03991400112325,1.61910957491345,1.94932925234301,3.13618820968135,1.54488862144927,0,0,0,11.4083170019111,0,0,0,1.94841936910093,0.760079596425296,1.01104889002957,2.62622923353838,4.91981978929626,1.03909497345377,1.04091196059682,0.913396434936424,1.15307748628029,1.20578112442098,1.64624189989987,1.75933227861546,1.23597483867187,0,0,0.808834249737046,0.662524555381181,0.969750506270444,0,9.36898550436951,20.1068838540917,1.53274233125155,0.599075622529601,0,0,4.34392854273986,5.49000723382352,4.64921102817598,8.8650403298061,8.43861009190091,2.70124457927428,4.2182728397617,1.2220723662038,1.7416975885413,2.77995034277042,10.9429765060966,1.69156575851515,2.5289231487682,2.16074555766419,2.41127708537144,3.12967896096108,4.74020765053944,3.74806898238915,21.4723797713383,0,1.32374256117473,0.879755620819744,1.09597866213787,0.834141747676794,0.348252166522167,0.823128545631774,2.38841120182192,0,0,0,1.24275463521301,0.703578179943289,1.62055855314913,2.3674473558521,2.16440654922144,1.3884040159864,0.697601834251224,1.3413670069981,0.467061369468678,1.6455984991348,0.820837320395476,0.810688095458557,0.292399974850665,1.09775057645525,0.671032093801859,4.83666881697493,5.04232600658494,2.97376904685418,2.3800550999719,1.91959425481711,3.48355007790658,3.47942145569652,2.21851877085677,1.77902435075896,1.33157938278791,2.84717436926707,1.31759163779209,1.25667604400135,1.39269530428806,1.36474860983384,0,1.94524244887225,3.18626037206988,1.70701110857774,2.17072173958485,5.63538678365402,3.25842124552503,2.71533482034676,3.29638353484497,5.05892296994058,7.0852871030209,7.84993639206874,5.92306386824642,0.592905254174298,0.500535317148282,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.763877555344259,0.575392274901621,1.62135226775035,0,2.87536413054709,0,0.936113019343682,1.26289438973556,1.07638448113147,0,1.10851914099963,2.08440552947533,2.93336957595647,2.71592137240301,3.28566347603903,1.67506257441816,0.476087281772027,1.95133647857799,0.945810864637146,0.8858587585951,0.637819074629948,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0.983528546038072,1.93155722413313,5.61927064957272,6.09500770279457,0.327869890753351,1.00988370881749,0.315508219416257,0.390438744296638,0.861693590931196,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,1.58115111178609,7.06906896127976,3.69044221541498,0.534196811001766,1.30309567482861,2.3095817216155,1.32745138339963,0.971122544619926,3.93020624054176,2.07465587731488,1.18120757152309,1.84461088766356,1.55056975900933,2.90826983582004,2.85197902707777,1.58018378967908,3.16255825724996,0,7.83011093233712,5.76195500900193,2.71653235943784,6.43011105094777,10.6404140185364,4.99432689285798,5.10101963866575,2.13125464380219,1.17335854031855,0,4.85162475720916,0.16488625294148,0.161464426695906,0.663442174209714,0.477489376012546,0.656563598980245,3.49777003955821,4.82105785227325,1.19609616558497,0.82554747185289,0,1.50694765603753,1.0935538217682,1.37266903923914,0.679913719975421,0.559805809294632,0.414599921413271,2.86401185404534,1.26534397432454,1.62655573701479,1.08005340821801,1.46361807210128,1.52853794622324,2.56242258131159,2.89287095038676,2.6175594198403,3.75883422546199,1.24267862617385,1.12738587736838,2.69129782879162,3.30916980914195,1.94451188344048,0.774958940866387,2.19642963138012,0.938857909166032,2.21347454234715,3.35549902162275,1.20792060413003,1.44015003128933,0.632022241256357,1.01362607645082,1.33524244314275,2.5984164595559,2.50637373934474,3.57626438606277,2.04332264183947,2.21534290761866,3.12995994839258,1.752756553065,2.21817607301049,2.53390489923356,1.34696578296461,0.584384510907845,0.226730383615211,1.99787358036658,4.75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| |phase1_expression=8.96833543786846,4.88565570695105,3.18499467572675,4.23449895829562,3.50627010962443,4.19698179779725,3.73780224952841,0,1.40788722151667,1.40438715793196,2.05461561870606,3.43020283679947,1.19840510951844,0.437102012094987,1.99865857089398,1.21485160433896,0,5.8360500591274,7.81552271552711,3.81950686618227,2.29616883407888,1.29078236561151,0.522399578277871,4.15980299262857,3.89995777814189,1.72269589234506,3.87685796543167,3.23206849028834,2.66032787238923,4.78857246543868,2.43903561720835,0,0,0,1.73310971850765,2.32728503501889,3.26670970019791,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.734187008646726,0,0,0,0.388859798148567,0.419959264876088,0,5.5368259999053,0.725362142011344,0.336093799142464,0.514518872071894,0,0,2.83243045203437,2.11596391708813,3.80298842103708,0,0,0,0,0.7104801149461,0,0.384218305321555,1.97010263386108,2.16009501330705,2.73422449756797,3.71346279724945,3.75476519617743,1.83736198822431,1.53352753629178,2.75765635983006,6.60695285996332,5.87361755191863,6.29786786350598,5.67111037239834,5.6722339033494,5.2091337055676,3.90856198601933,3.93933827022176,3.20876320331301,10.0173719061047,11.10499110233,9.13357284543973,0.302904773332736,0.0755715601067855,1.73918693221007,2.58127163094416,2.03991400112325,1.61910957491345,1.94932925234301,3.13618820968135,1.54488862144927,0,0,0,11.4083170019111,0,0,0,1.94841936910093,0.760079596425296,1.01104889002957,2.62622923353838,4.91981978929626,1.03909497345377,1.04091196059682,0.913396434936424,1.15307748628029,1.20578112442098,1.64624189989987,1.75933227861546,1.23597483867187,0,0,0.808834249737046,0.662524555381181,0.969750506270444,0,9.36898550436951,20.1068838540917,1.53274233125155,0.599075622529601,0,0,4.34392854273986,5.49000723382352,4.64921102817598,8.8650403298061,8.43861009190091,2.70124457927428,4.2182728397617,1.2220723662038,1.7416975885413,2.77995034277042,10.9429765060966,1.69156575851515,2.5289231487682,2.16074555766419,2.41127708537144,3.12967896096108,4.74020765053944,3.74806898238915,21.4723797713383,0,1.32374256117473,0.879755620819744,1.09597866213787,0.834141747676794,0.348252166522167,0.823128545631774,2.38841120182192,0,0,0,1.24275463521301,0.703578179943289,1.62055855314913,2.3674473558521,2.16440654922144,1.3884040159864,0.697601834251224,1.3413670069981,0.467061369468678,1.6455984991348,0.820837320395476,0.810688095458557,0.292399974850665,1.09775057645525,0.671032093801859,4.83666881697493,5.04232600658494,2.97376904685418,2.3800550999719,1.91959425481711,3.48355007790658,3.47942145569652,2.21851877085677,1.77902435075896,1.33157938278791,2.84717436926707,1.31759163779209,1.25667604400135,1.39269530428806,1.36474860983384,0,1.94524244887225,3.18626037206988,1.70701110857774,2.17072173958485,5.63538678365402,3.25842124552503,2.71533482034676,3.29638353484497,5.05892296994058,7.0852871030209,7.84993639206874,5.92306386824642,0.592905254174298,0.500535317148282,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.763877555344259,0.575392274901621,1.62135226775035,0,2.87536413054709,0,0.936113019343682,1.26289438973556,1.07638448113147,0,1.10851914099963,2.08440552947533,2.93336957595647,2.71592137240301,3.28566347603903,1.67506257441816,0.476087281772027,1.95133647857799,0.945810864637146,0.8858587585951,0.637819074629948,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0.983528546038072,1.93155722413313,5.61927064957272,6.09500770279457,0.327869890753351,1.00988370881749,0.315508219416257,0.390438744296638,0.861693590931196,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,1.58115111178609,7.06906896127976,3.69044221541498,0.534196811001766,1.30309567482861,2.3095817216155,1.32745138339963,0.971122544619926,3.93020624054176,2.07465587731488,1.18120757152309,1.84461088766356,1.55056975900933,2.90826983582004,2.85197902707777,1.58018378967908,3.16255825724996,0,7.83011093233712,5.76195500900193,2.71653235943784,6.43011105094777,10.6404140185364,4.99432689285798,5.10101963866575,2.13125464380219,1.17335854031855,0,4.85162475720916,0.16488625294148,0.161464426695906,0.663442174209714,0.477489376012546,0.656563598980245,3.49777003955821,4.82105785227325,1.19609616558497,0.82554747185289,0,1.50694765603753,1.0935538217682,1.37266903923914,0.679913719975421,0.559805809294632,0.414599921413271,2.86401185404534,1.26534397432454,1.62655573701479,1.08005340821801,1.46361807210128,1.52853794622324,2.56242258131159,2.89287095038676,2.6175594198403,3.75883422546199,1.24267862617385,1.12738587736838,2.69129782879162,3.30916980914195,1.94451188344048,0.774958940866387,2.19642963138012,0.938857909166032,2.21347454234715,3.35549902162275,1.20792060413003,1.44015003128933,0.632022241256357,1.01362607645082,1.33524244314275,2.5984164595559,2.50637373934474,3.57626438606277,2.04332264183947,2.21534290761866,3.12995994839258,1.752756553065,2.21817607301049,2.53390489923356,1.34696578296461,0.584384510907845,0.226730383615211,1.99787358036658,4.75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| ||
|short_description=p2@Strbp | |||
}} | }} |
Latest revision as of 16:31, 26 September 2015
Short description: | p2@Strbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Strbp_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000155237_5end |
EntrezGene: | Strbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.10e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.75e-18 | 54 |
neural tube | 4.88e-17 | 52 |
neural rod | 4.88e-17 | 52 |
future spinal cord | 4.88e-17 | 52 |
neural keel | 4.88e-17 | 52 |
neurectoderm | 8.85e-17 | 64 |
neural plate | 8.85e-17 | 64 |
presumptive neural plate | 8.85e-17 | 64 |
pre-chordal neural plate | 1.78e-15 | 49 |
brain | 1.71e-14 | 47 |
future brain | 1.71e-14 | 47 |
regional part of brain | 6.26e-14 | 46 |
ecto-epithelium | 1.21e-13 | 73 |
anterior neural tube | 2.26e-13 | 40 |
regional part of forebrain | 5.84e-13 | 39 |
forebrain | 5.84e-13 | 39 |
future forebrain | 5.84e-13 | 39 |
central nervous system | 5.39e-12 | 73 |
gray matter | 8.24e-12 | 34 |
nervous system | 7.19e-11 | 75 |
ectoderm-derived structure | 1.28e-09 | 95 |
ectoderm | 1.28e-09 | 95 |
presumptive ectoderm | 1.28e-09 | 95 |
brain grey matter | 2.62e-09 | 29 |
regional part of telencephalon | 2.62e-09 | 29 |
telencephalon | 2.62e-09 | 29 |
structure with developmental contribution from neural crest | 2.37e-08 | 92 |
occipital lobe | 1.07e-07 | 10 |
visual cortex | 1.07e-07 | 10 |
neocortex | 1.07e-07 | 10 |