FFCP PHASE1:Mm9::chr2:34817203..34817218,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:34817203..34817218,+ to FFCP PHASE1:Mm9::chr2:34817203..34817218,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=269 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:34817203..34817218,+ | |||
|description=CAGE_peak_at_chr2:34817203..34817218,+ | |||
|id=chr2:34817203..34817218,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.02e-16!32;CL:0002032!5.02e-16!32;CL:0000037!5.02e-16!32;CL:0000566!5.02e-16!32;CL:0000837!5.02e-16!32;CL:0000791!2.49e-13!9;CL:0000789!2.49e-13!9;CL:0002420!2.49e-13!9;CL:0002419!2.49e-13!9;CL:0000790!2.49e-13!9;CL:0002031!1.24e-12!25;CL:0000838!2.93e-12!12;CL:0000893!8.57e-12!6;CL:0002489!8.57e-12!6;CL:0000898!8.57e-12!6;CL:0000809!8.57e-12!6;CL:0000810!8.57e-12!6;CL:0000895!8.57e-12!6;CL:0000808!8.57e-12!6;CL:0000894!8.57e-12!6;CL:0000806!8.57e-12!6;CL:0000807!8.57e-12!6;CL:0000805!8.57e-12!6;CL:0002425!8.57e-12!6;CL:0002436!8.57e-12!6;CL:0002427!8.57e-12!6;CL:0002428!8.57e-12!6;CL:0002429!8.57e-12!6;CL:0002433!8.57e-12!6;CL:0002431!8.57e-12!6;CL:0002432!8.57e-12!6;CL:0000624!9.97e-12!8;CL:0000542!3.69e-11!13;CL:0000051!3.69e-11!13;CL:0002320!5.51e-11!46;CL:0000134!5.51e-11!46;CL:0000084!1.33e-10!11;CL:0000827!1.33e-10!11;CL:0000738!3.99e-10!17;CL:0002087!3.99e-10!17;CL:0000219!1.26e-08!54;CL:0000049!7.96e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.87e-09,6;CL:0002489,2.87e-09,6;CL:0000898,2.87e-09,6;CL:0000809,2.87e-09,6;CL:0000810,2.87e-09,6;CL:0000895,2.87e-09,6;CL:0000808,2.87e-09,6;CL:0000894,2.87e-09,6;CL:0000806,2.87e-09,6;CL:0000807,2.87e-09,6;CL:0000805,2.87e-09,6;CL:0002425,2.87e-09,6;CL:0002436,2.87e-09,6;CL:0002427,2.87e-09,6;CL:0002428,2.87e-09,6;CL:0002429,2.87e-09,6;CL:0002433,2.87e-09,6;CL:0002431,2.87e-09,6;CL:0002432,2.87e-09,6;CL:0002476,2.35e-07,2;CL:0000738,3.24e-07,17;CL:0002087,3.24e-07,17;CL:0000624,3.51e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.25e-18!48;UBERON:0002390!7.57e-18!45;UBERON:0003061!7.57e-18!45;UBERON:0004177!4.75e-14!29;UBERON:0002405!9.15e-13!70;UBERON:0002370!3.33e-12!23;UBERON:0000974!3.33e-12!23;UBERON:0004807!3.33e-12!23;UBERON:0005058!3.33e-12!23;UBERON:0003351!3.33e-12!23;UBERON:0009113!3.33e-12!23;UBERON:0003295!3.33e-12!23;UBERON:0009722!3.33e-12!23;UBERON:0005562!3.33e-12!23;UBERON:0007690!3.33e-12!23;UBERON:0006562!1.49e-11!24;UBERON:0003408!1.49e-11!24;UBERON:0001557!1.49e-11!24;UBERON:0001042!1.49e-11!24;UBERON:0008814!1.49e-11!24;UBERON:0009145!1.49e-11!24;UBERON:0002384!5.51e-11!46;UBERON:0003081!1.66e-10!88;UBERON:0000072!6.71e-10!27;UBERON:0005057!3.09e-08!51;UBERON:0000063!5.15e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.85e-14,1;UBERON:0001097,4.85e-14,1;UBERON:0003968,4.85e-14,1;UBERON:0001467,4.85e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.703943610758334,1.40438715793196,1.19852577757853,0.159544317990673,0.684802919724823,0.34968160967599,0,0.202475267389826,0,0.473193248037357,0.411343300817216,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.958520996047362,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,1.08781136763742,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0,0.457556346413045,3.0596117398894,1.6794174278839,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.703943610758334,1.40438715793196,1.19852577757853,0.159544317990673,0.684802919724823,0.34968160967599,0,0.202475267389826,0,0.473193248037357,0.411343300817216,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.958520996047362,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,1.08781136763742,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0,0.457556346413045,3.0596117398894,1.6794174278839,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr2:34817203..34817218,+ | |||
}} | }} |
Latest revision as of 02:45, 5 August 2015
Short description: | p@chr2:34817203..34817218, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:34817203..34817218, + |
Coexpression cluster: | MCL_coexpression_mm9:269 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 2.87e-09 | 6 |
double negative thymocyte | 2.87e-09 | 6 |
naive T cell | 2.87e-09 | 6 |
double-positive, alpha-beta thymocyte | 2.87e-09 | 6 |
CD4-positive, alpha-beta thymocyte | 2.87e-09 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.87e-09 | 6 |
DN4 thymocyte | 2.87e-09 | 6 |
DN1 thymic pro-T cell | 2.87e-09 | 6 |
DN2 thymocyte | 2.87e-09 | 6 |
DN3 thymocyte | 2.87e-09 | 6 |
immature single positive thymocyte | 2.87e-09 | 6 |
early T lineage precursor | 2.87e-09 | 6 |
mature CD4 single-positive thymocyte | 2.87e-09 | 6 |
resting double-positive thymocyte | 2.87e-09 | 6 |
double-positive blast | 2.87e-09 | 6 |
CD69-positive double-positive thymocyte | 2.87e-09 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 2.87e-09 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.87e-09 | 6 |
CD24-positive, CD4 single-positive thymocyte | 2.87e-09 | 6 |
bone marrow macrophage | 2.35e-07 | 2 |
leukocyte | 3.24e-07 | 17 |
nongranular leukocyte | 3.24e-07 | 17 |
CD4-positive, alpha-beta T cell | 3.51e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.85e-14 | 1 |
axillary lymph node | 4.85e-14 | 1 |
peripheral lymph node | 4.85e-14 | 1 |
shoulder | 4.85e-14 | 1 |