FFCP PHASE1:Mm9::chr2:17652662..17652714,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:17652662..17652714,- to FFCP PHASE1:Mm9::chr2:17652662..17652714,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74103 | |EntrezGene=74103 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2245 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DC07 | |UniProt=Q9DC07 | ||
|association_with_transcript=0bp_to_ENSMUST00000028080,NM_028757,uc008ila.1_5end | |||
|cluster_id=chr2:17652662..17652714,- | |||
|description=CAGE_peak_2_at_Nebl_5end | |||
|id=chr2:17652662..17652714,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.07e-14!63;UBERON:0004121!1.77e-14!102;UBERON:0000924!1.77e-14!102;UBERON:0006601!1.77e-14!102;UBERON:0000955!2.03e-11!50;UBERON:0006238!2.03e-11!50;UBERON:0001049!4.36e-11!52;UBERON:0005068!4.36e-11!52;UBERON:0006241!4.36e-11!52;UBERON:0007135!4.36e-11!52;UBERON:0002616!7.22e-11!49;UBERON:0002346!1.75e-10!71;UBERON:0003075!1.75e-10!71;UBERON:0007284!1.75e-10!71;UBERON:0001017!2.48e-10!73;UBERON:0005743!2.48e-10!73;UBERON:0000073!5.37e-10!75;UBERON:0001016!5.37e-10!75;UBERON:0005178!1.30e-09!17;UBERON:0005181!1.30e-09!17;UBERON:0002224!1.30e-09!17;UBERON:0000915!1.30e-09!17;UBERON:0008947!1.30e-09!17;UBERON:0003258!1.30e-09!17;UBERON:0003056!5.43e-09!49;UBERON:0000153!5.82e-09!94;UBERON:0002048!2.36e-08!14;UBERON:0000117!2.36e-08!14;UBERON:0000171!2.36e-08!14;UBERON:0000170!2.36e-08!14;UBERON:0005597!2.36e-08!14;UBERON:0000118!2.36e-08!14;UBERON:0005153!2.47e-07!17;UBERON:0007811!3.34e-07!86;UBERON:0003080!3.39e-07!40;UBERON:0000475!8.17e-07!200;UBERON:0002020!9.16e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.98e-15,95;UBERON:0000924,3.98e-15,95;UBERON:0006601,3.98e-15,95;UBERON:0010371,8.78e-15,73;UBERON:0000073,2.59e-12,54;UBERON:0002346,1.19e-11,64;UBERON:0003075,1.19e-11,64;UBERON:0007284,1.19e-11,64;UBERON:0001049,1.74e-11,52;UBERON:0005068,1.74e-11,52;UBERON:0006241,1.74e-11,52;UBERON:0007135,1.74e-11,52;UBERON:0000955,1.94e-10,47;UBERON:0006238,1.94e-10,47;UBERON:0001017,3.19e-10,73;UBERON:0005178,5.98e-10,17;UBERON:0005181,5.98e-10,17;UBERON:0002224,5.98e-10,17;UBERON:0000915,5.98e-10,17;UBERON:0008947,5.98e-10,17;UBERON:0003258,5.98e-10,17;UBERON:0001016,6.90e-10,75;UBERON:0002616,6.93e-10,46;UBERON:0003056,2.65e-09,49;UBERON:0002048,1.23e-08,14;UBERON:0000117,1.23e-08,14;UBERON:0000171,1.23e-08,14;UBERON:0000170,1.23e-08,14;UBERON:0005597,1.23e-08,14;UBERON:0000118,1.23e-08,14;UBERON:0005153,1.41e-07,17;UBERON:0003080,1.96e-07,40;UBERON:0002020,5.53e-07,34;UBERON:0002780,6.07e-07,39;UBERON:0001890,6.07e-07,39;UBERON:0006240,6.07e-07,39 | |||
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| ||
|short_description=p2@Nebl | |||
}} | }} |
Latest revision as of 06:59, 26 September 2015
Short description: | p2@Nebl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nebl_5end |
Coexpression cluster: | MCL_coexpression_mm9:2245 |
Association with transcript: | 0bp_to_ENSMUST00000028080, NM_028757, uc008ila.1_5end |
EntrezGene: | Nebl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.98e-15 | 95 |
ectoderm | 3.98e-15 | 95 |
presumptive ectoderm | 3.98e-15 | 95 |
ecto-epithelium | 8.78e-15 | 73 |
regional part of nervous system | 2.59e-12 | 54 |
neurectoderm | 1.19e-11 | 64 |
neural plate | 1.19e-11 | 64 |
presumptive neural plate | 1.19e-11 | 64 |
neural tube | 1.74e-11 | 52 |
neural rod | 1.74e-11 | 52 |
future spinal cord | 1.74e-11 | 52 |
neural keel | 1.74e-11 | 52 |
brain | 1.94e-10 | 47 |
future brain | 1.94e-10 | 47 |
central nervous system | 3.19e-10 | 73 |
thoracic cavity element | 5.98e-10 | 17 |
thoracic segment organ | 5.98e-10 | 17 |
thoracic cavity | 5.98e-10 | 17 |
thoracic segment of trunk | 5.98e-10 | 17 |
respiratory primordium | 5.98e-10 | 17 |
endoderm of foregut | 5.98e-10 | 17 |
nervous system | 6.90e-10 | 75 |
regional part of brain | 6.93e-10 | 46 |
pre-chordal neural plate | 2.65e-09 | 49 |
lung | 1.23e-08 | 14 |
respiratory tube | 1.23e-08 | 14 |
respiration organ | 1.23e-08 | 14 |
pair of lungs | 1.23e-08 | 14 |
lung primordium | 1.23e-08 | 14 |
lung bud | 1.23e-08 | 14 |
epithelial bud | 1.41e-07 | 17 |
anterior neural tube | 1.96e-07 | 40 |
gray matter | 5.53e-07 | 34 |
regional part of forebrain | 6.07e-07 | 39 |
forebrain | 6.07e-07 | 39 |
future forebrain | 6.07e-07 | 39 |