FFCP PHASE1:Mm9::chr2:170557377..170557420,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:170557377..170557420,+ to FFCP PHASE1:Mm9::chr2:170557377..170557420,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76829 | |EntrezGene=76829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q91ZM9,B1AVY6,Q6NXY7 | |UniProt=Q91ZM9,B1AVY6,Q6NXY7 | ||
|association_with_transcript=70bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end | |||
|cluster_id=chr2:170557377..170557420,+ | |||
|description=CAGE_peak_1_at_Dok5_5end | |||
|id=chr2:170557377..170557420,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.71e-16!43;CL:0000221!2.19e-16!44;CL:0000133!2.19e-16!44;CL:0000540!1.46e-14!33;CL:0000047!1.46e-14!33;CL:0000031!1.46e-14!33;CL:0000404!1.46e-14!33;CL:0000055!9.08e-14!50;CL:0000117!3.94e-13!23;CL:0000337!3.94e-13!23;CL:0000393!9.39e-12!39;CL:0000211!9.39e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.13e-18,43;CL:0000221,5.33e-18,44;CL:0000133,5.33e-18,44;CL:0000540,4.84e-17,33;CL:0000047,4.84e-17,33;CL:0000031,4.84e-17,33;CL:0000404,4.84e-17,33;CL:0000117,2.46e-15,23;CL:0000337,2.46e-15,23;CL:0000393,1.39e-14,39;CL:0000211,1.39e-14,39;CL:0002321,7.82e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-31!75;UBERON:0001016!1.10e-31!75;UBERON:0001017!1.25e-30!73;UBERON:0005743!1.25e-30!73;UBERON:0004121!2.72e-28!102;UBERON:0000924!2.72e-28!102;UBERON:0006601!2.72e-28!102;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0002346!2.21e-22!71;UBERON:0003075!2.21e-22!71;UBERON:0007284!2.21e-22!71;UBERON:0000033!4.29e-21!63;UBERON:0000955!6.75e-21!50;UBERON:0006238!6.75e-21!50;UBERON:0002616!1.57e-20!49;UBERON:0002020!1.66e-17!34;UBERON:0003056!4.61e-17!49;UBERON:0003080!2.02e-16!40;UBERON:0002780!1.02e-15!39;UBERON:0001890!1.02e-15!39;UBERON:0006240!1.02e-15!39;UBERON:0002791!1.78e-14!29;UBERON:0003528!1.78e-14!29;UBERON:0001893!1.78e-14!29;UBERON:0000153!2.53e-11!94;UBERON:0007811!4.46e-11!86;UBERON:0000956!6.40e-10!21;UBERON:0001869!6.40e-10!21;UBERON:0000203!6.40e-10!21;UBERON:0000468!2.70e-08!333;UBERON:0002619!9.26e-08!17;UBERON:0002021!3.12e-07!10;UBERON:0000411!3.12e-07!10;UBERON:0001950!3.12e-07!10;UBERON:0003076!6.71e-07!12;UBERON:0003057!6.71e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.81e-35,75;UBERON:0001017,3.17e-34,73;UBERON:0004121,6.09e-33,95;UBERON:0000924,6.09e-33,95;UBERON:0006601,6.09e-33,95;UBERON:0002346,1.73e-26,64;UBERON:0003075,1.73e-26,64;UBERON:0007284,1.73e-26,64;UBERON:0000073,4.81e-26,54;UBERON:0001049,9.72e-25,52;UBERON:0005068,9.72e-25,52;UBERON:0006241,9.72e-25,52;UBERON:0007135,9.72e-25,52;UBERON:0010371,2.60e-24,73;UBERON:0000955,1.19e-20,47;UBERON:0006238,1.19e-20,47;UBERON:0010314,1.57e-20,92;UBERON:0002616,3.17e-20,46;UBERON:0002020,8.78e-20,34;UBERON:0003056,2.66e-18,49;UBERON:0003080,4.96e-18,40;UBERON:0002780,3.29e-17,39;UBERON:0001890,3.29e-17,39;UBERON:0006240,3.29e-17,39;UBERON:0003528,3.38e-16,29;UBERON:0002791,3.38e-16,29;UBERON:0001893,3.38e-16,29;UBERON:0000956,7.99e-11,21;UBERON:0001869,7.99e-11,21;UBERON:0000203,7.99e-11,21;UBERON:0002021,2.56e-08,10;UBERON:0000411,2.56e-08,10;UBERON:0001950,2.56e-08,10;UBERON:0002619,2.75e-08,17;UBERON:0003076,2.66e-07,12;UBERON:0003057,2.66e-07,12;UBERON:0002420,9.74e-07,8;UBERON:0007245,9.74e-07,8;UBERON:0010009,9.74e-07,8;UBERON:0010011,9.74e-07,8;UBERON:0000454,9.74e-07,8 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.45062890951116,1.75748946187577,0.972149495371417,2.51975558925653,4.31257693094915,0,0,0,2.31533492432352,2.0057340795713,1.54701627683233,9.5088736604011,11.6378015439847,8.23980824558033,3.38844532069132,0.889294796111139,0.899899717281399,0,0.7104801149461,2.39680088414724,7.30014780110954,7.15458324928496,10.2604513132085,8.41299845405528,6.85562362569129,7.06779331045163,4.77714116938321,3.35459148563827,1.83843757322004,5.50579404996943,9.70423769447427,8.90917892886212,7.64940468835124,9.69769022185542,7.29278718779464,10.3297709630511,5.06486349028512,11.6126668310376,10.9012576625257,8.11518580554887,11.7431650869939,5.2251073399897,5.51672388779534,0,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,2.08182392119363,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.628332956648377,0,0.289198713839823,0.884610551949874,10.676612096529,3.75430581382669,1.93950101254089,0,5.5628351432194,4.1889341362691,0.255457055208591,0,0,0,11.5338792341713,9.60751265919116,7.53926112677186,7.47444576826789,8.69432554923124,7.2725815595846,8.4365456795234,0.509196819251581,2.48813941220186,2.77995034277042,0.841767423545896,1.04096354370163,3.67843367093557,3.60124259610698,2.56198190320716,2.31324097114515,1.66547836370305,3.46696380870997,1.55222022443409,0.431135985865684,1.13463648100692,1.05570674498369,1.09597866213787,1.39023624612799,2.089512999133,2.46938563689532,0.199034266818493,0,0,0,2.69263504296152,2.57978665979206,2.52086886045421,2.3674473558521,2.36117078096885,2.00547246753592,1.39520366850245,1.3413670069981,0.583826711835847,0.822799249567402,0.820837320395476,0.810688095458557,0.292399974850665,0.878200461164203,0.134206418760372,4.83666881697493,3.60166143327496,0,0.264450566663544,1.06644125267617,0.696710015581316,0.515469845288373,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,0,1.11642284300551,0.312037673114561,0,0.179397413521912,0,0,1.51593129416388,0.325929952884052,0.509235257325564,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0.491764273019036,0,10.7568895291821,10.5490517932983,0,5.80683132570058,3.78609863299508,4.68526493155966,5.38558494331997,1.91175038362042,2.45078541490634,1.69845918473299,1.61924280669958,3.79932615284705,4.34816555741176,4.4984984299053,0.283880170416537,1.6025904330053,1.30309567482861,0.824850614862677,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,2.34079422240703,3.36332577835162,3.42939256050548,1.59606210278046,2.31879462882692,1.97458824722545,1.8267896946876,0.469343416127421,1.48282449604674,0,2.14352128823924,1.29171541356724,1.38719727334758,1.07435109602823,0.984845398470368,0,10.3838169125885,0.170870880797853,0.412773735926445,0,0,0,0.457556346413045,0,0,0,0,1.10717597753397,1.01659733563424,0.756037385752609,0.418176592028937,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0.598066184175915,0.330916980914195,0.777804753376191,1.80823752868824,1.520605129417,1.40828686374905,0.2604087696879,0.104859344425711,0,0.864090018773596,0,0.810900861160657,0.924398614483445,1.03936658382236,0.716106782669926,0.993406773906324,0.480781798079875,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,4.76133805591944,0.665957860122194,0.358855426437903,0.503653849092235,0.19318959403219,0.93841237725591,0.36630324853453,0.214368379079066,0,9.60078132449013,8.28585425712918,10.3121192419091,10.3111909406213,10.2762377965596,8.3093328712867,10.8003600037089,5.85417564191487,8.15656336171568,7.24864436452548,2.38710899443606,2.79317411380722,2.04880326904961,1.94485373654635,3.35381060204772,4.22840069435032,3.11145418922261,5.56294654545014,3.20919209591815,4.29585259998456,4.81610669791456,5.28153755881013,5.05664140337365,4.9939618875798,5.16919220600519,2.38146845641537,4.51948871184936,4.43691207066522,2.06042950401653,3.67997300335993,3.77156177623957,5.6792257970988,5.7224685587357,4.94177816549917,4.70546902076653,4.99226186560891,3.84148743032822,5.5244639401947,5.56796866768033,3.36685362994643,5.81311588808453,4.33419722452479,6.95692773388472,4.49316839439301,3.08650577569826,3.99696924700713,3.97683734357194,3.22306581072447,3.44318997723918,5.29419405886837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| |phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.45062890951116,1.75748946187577,0.972149495371417,2.51975558925653,4.31257693094915,0,0,0,2.31533492432352,2.0057340795713,1.54701627683233,9.5088736604011,11.6378015439847,8.23980824558033,3.38844532069132,0.889294796111139,0.899899717281399,0,0.7104801149461,2.39680088414724,7.30014780110954,7.15458324928496,10.2604513132085,8.41299845405528,6.85562362569129,7.06779331045163,4.77714116938321,3.35459148563827,1.83843757322004,5.50579404996943,9.70423769447427,8.90917892886212,7.64940468835124,9.69769022185542,7.29278718779464,10.3297709630511,5.06486349028512,11.6126668310376,10.9012576625257,8.11518580554887,11.7431650869939,5.2251073399897,5.51672388779534,0,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,2.08182392119363,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.628332956648377,0,0.289198713839823,0.884610551949874,10.676612096529,3.75430581382669,1.93950101254089,0,5.5628351432194,4.1889341362691,0.255457055208591,0,0,0,11.5338792341713,9.60751265919116,7.53926112677186,7.47444576826789,8.69432554923124,7.2725815595846,8.4365456795234,0.509196819251581,2.48813941220186,2.77995034277042,0.841767423545896,1.04096354370163,3.67843367093557,3.60124259610698,2.56198190320716,2.31324097114515,1.66547836370305,3.46696380870997,1.55222022443409,0.431135985865684,1.13463648100692,1.05570674498369,1.09597866213787,1.39023624612799,2.089512999133,2.46938563689532,0.199034266818493,0,0,0,2.69263504296152,2.57978665979206,2.52086886045421,2.3674473558521,2.36117078096885,2.00547246753592,1.39520366850245,1.3413670069981,0.583826711835847,0.822799249567402,0.820837320395476,0.810688095458557,0.292399974850665,0.878200461164203,0.134206418760372,4.83666881697493,3.60166143327496,0,0.264450566663544,1.06644125267617,0.696710015581316,0.515469845288373,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,0,1.11642284300551,0.312037673114561,0,0.179397413521912,0,0,1.51593129416388,0.325929952884052,0.509235257325564,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0.491764273019036,0,10.7568895291821,10.5490517932983,0,5.80683132570058,3.78609863299508,4.68526493155966,5.38558494331997,1.91175038362042,2.45078541490634,1.69845918473299,1.61924280669958,3.79932615284705,4.34816555741176,4.4984984299053,0.283880170416537,1.6025904330053,1.30309567482861,0.824850614862677,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,2.34079422240703,3.36332577835162,3.42939256050548,1.59606210278046,2.31879462882692,1.97458824722545,1.8267896946876,0.469343416127421,1.48282449604674,0,2.14352128823924,1.29171541356724,1.38719727334758,1.07435109602823,0.984845398470368,0,10.3838169125885,0.170870880797853,0.412773735926445,0,0,0,0.457556346413045,0,0,0,0,1.10717597753397,1.01659733563424,0.756037385752609,0.418176592028937,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0.598066184175915,0.330916980914195,0.777804753376191,1.80823752868824,1.520605129417,1.40828686374905,0.2604087696879,0.104859344425711,0,0.864090018773596,0,0.810900861160657,0.924398614483445,1.03936658382236,0.716106782669926,0.993406773906324,0.480781798079875,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,4.76133805591944,0.665957860122194,0.358855426437903,0.503653849092235,0.19318959403219,0.93841237725591,0.36630324853453,0.214368379079066,0,9.60078132449013,8.28585425712918,10.3121192419091,10.3111909406213,10.2762377965596,8.3093328712867,10.8003600037089,5.85417564191487,8.15656336171568,7.24864436452548,2.38710899443606,2.79317411380722,2.04880326904961,1.94485373654635,3.35381060204772,4.22840069435032,3.11145418922261,5.56294654545014,3.20919209591815,4.29585259998456,4.81610669791456,5.28153755881013,5.05664140337365,4.9939618875798,5.16919220600519,2.38146845641537,4.51948871184936,4.43691207066522,2.06042950401653,3.67997300335993,3.77156177623957,5.6792257970988,5.7224685587357,4.94177816549917,4.70546902076653,4.99226186560891,3.84148743032822,5.5244639401947,5.56796866768033,3.36685362994643,5.81311588808453,4.33419722452479,6.95692773388472,4.49316839439301,3.08650577569826,3.99696924700713,3.97683734357194,3.22306581072447,3.44318997723918,5.29419405886837,8.11537424671475 | ||
|short_description=p1@Dok5 | |||
}} | }} |
Latest revision as of 05:51, 26 September 2015
Short description: | p1@Dok5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dok5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 70bp_to_ENSMUST00000029075, NM_001163686, NM_029761, uc008ocg.2, uc012ckm.1_5end |
EntrezGene: | Dok5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.13e-18 | 43 |
ectodermal cell | 5.33e-18 | 44 |
neurectodermal cell | 5.33e-18 | 44 |
neuron | 4.84e-17 | 33 |
neuronal stem cell | 4.84e-17 | 33 |
neuroblast | 4.84e-17 | 33 |
electrically signaling cell | 4.84e-17 | 33 |
CNS neuron (sensu Vertebrata) | 2.46e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.46e-15 | 23 |
electrically responsive cell | 1.39e-14 | 39 |
electrically active cell | 1.39e-14 | 39 |
embryonic cell | 7.82e-07 | 70 |