FFCP PHASE1:Mm9::chr2:131317694..131317705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228608 | |EntrezGene=228608 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TLR8 | |UniProt=Q3TLR8 | ||
|association_with_transcript=0bp_to_ENSMUST00000110181_5end | |||
|cluster_id=chr2:131317694..131317705,+ | |||
|description=CAGE_peak_5_at_Smox_5end | |||
|id=chr2:131317694..131317705,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.12e-08,3;CL:0002202,2.12e-08,3;CL:0000069,2.12e-08,3;CL:0002632,2.12e-08,3;CL:0002368,2.12e-08,3;CL:0000307,2.12e-08,3;CL:0000377,2.12e-08,3;CL:0002614,5.00e-08,3;CL:0002321,7.95e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.50e-08,3;DOID:4045,1.50e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.12e-08,3;UBERON:0001005,2.12e-08,3;UBERON:0007196,2.12e-08,3;UBERON:0001558,2.12e-08,3;UBERON:0002038,5.00e-08,3;UBERON:0009663,5.00e-08,3;UBERON:0009661,5.00e-08,3;UBERON:0000125,5.00e-08,3;UBERON:0002308,5.00e-08,3 | |||
|phase1_expression=0.640595388419176,2.44282785347553,0.909998478779072,0,0,1.17515490338323,0,0.387369970324729,3.37892933164,1.40438715793196,1.88339765048055,0.398860794976682,0,0,0,0.809901069559304,0,0,0,0.42438965179803,0.425216450755349,0.297872853602656,0.522399578277871,0.159992422793407,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0,2.09265815368454,1.5626706890476,1.57057123192139,1.76469446409304,4.78131839470912,1.94204141212461,0,0.101376931219515,0,0,2.8343270329458,0.439372365468944,0.194429899074283,0.699932108126813,2.87505128729943,0.167782606057736,0.725362142011344,1.34437519656986,0,0,0,0.202316460859598,0,0.633831403506179,0,0.889294796111139,2.6996991518442,0.988866362566974,0.7104801149461,1.49800055259202,2.68952813725088,0.518448061542388,0.135005938331691,0,1.42825492201902,3.09215957332259,0.122490799214954,0.287536413054709,0,0,0.893811366596314,1.0752457327937,0.131886287730194,0.548925861614458,0,1.95428099300967,1.12552522006336,1.37518422999129,0.294628585473668,1.13897344639282,0.186399445825301,0.681535739998656,0.377857800533928,0,0,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0.519572009205738,0.35333957451034,1.26759077799012,0,0,0,1.94841936910093,1.52015919285059,1.51657333504435,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0.884610551949874,0,0.441683036920787,0,0,0,1.25668024088073,0,0.11981512450592,0,0.508280908292259,0.449371918214468,0.457500602818626,0.376963056338593,0.173824320192276,0.767146371990992,0.20778804455956,0.811206315338788,0,0.497627882440372,0.252722758433675,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.374806898238915,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0.61734640922383,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0,0.405344047729279,0.584799949701329,0,0.939444931322602,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.811440485554012,0.241177159752417,0,0.575392274901621,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.585400943573396,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,1.08781136763742,0.491764273019036,0.551873492609465,0.160550589987792,0.35163505977661,0.655739781506702,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,0.955875191810208,0,0.566153061577665,0,0,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0.322928853391811,0.72375509913787,0.596861720015682,0.492422699235184,0,0.741701208042039,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,1.35982743995084,0.559805809294632,1.65839968565309,0,0,0.203319467126849,0,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.515559547031063,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0.701794825336225,0,0.765153328275374,1.10295709559758,0.463735671240843 | |phase1_expression=0.640595388419176,2.44282785347553,0.909998478779072,0,0,1.17515490338323,0,0.387369970324729,3.37892933164,1.40438715793196,1.88339765048055,0.398860794976682,0,0,0,0.809901069559304,0,0,0,0.42438965179803,0.425216450755349,0.297872853602656,0.522399578277871,0.159992422793407,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0,2.09265815368454,1.5626706890476,1.57057123192139,1.76469446409304,4.78131839470912,1.94204141212461,0,0.101376931219515,0,0,2.8343270329458,0.439372365468944,0.194429899074283,0.699932108126813,2.87505128729943,0.167782606057736,0.725362142011344,1.34437519656986,0,0,0,0.202316460859598,0,0.633831403506179,0,0.889294796111139,2.6996991518442,0.988866362566974,0.7104801149461,1.49800055259202,2.68952813725088,0.518448061542388,0.135005938331691,0,1.42825492201902,3.09215957332259,0.122490799214954,0.287536413054709,0,0,0.893811366596314,1.0752457327937,0.131886287730194,0.548925861614458,0,1.95428099300967,1.12552522006336,1.37518422999129,0.294628585473668,1.13897344639282,0.186399445825301,0.681535739998656,0.377857800533928,0,0,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0.519572009205738,0.35333957451034,1.26759077799012,0,0,0,1.94841936910093,1.52015919285059,1.51657333504435,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0.884610551949874,0,0.441683036920787,0,0,0,1.25668024088073,0,0.11981512450592,0,0.508280908292259,0.449371918214468,0.457500602818626,0.376963056338593,0.173824320192276,0.767146371990992,0.20778804455956,0.811206315338788,0,0.497627882440372,0.252722758433675,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.374806898238915,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0.61734640922383,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0,0.405344047729279,0.584799949701329,0,0.939444931322602,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.811440485554012,0.241177159752417,0,0.575392274901621,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.585400943573396,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,1.08781136763742,0.491764273019036,0.551873492609465,0.160550589987792,0.35163505977661,0.655739781506702,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,0.955875191810208,0,0.566153061577665,0,0,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0.322928853391811,0.72375509913787,0.596861720015682,0.492422699235184,0,0.741701208042039,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,1.35982743995084,0.559805809294632,1.65839968565309,0,0,0.203319467126849,0,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.515559547031063,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0.701794825336225,0,0.765153328275374,1.10295709559758,0.463735671240843 | ||
|short_description=p5@Smox | |||
}} | }} |
Latest revision as of 18:20, 25 September 2015
Short description: | p5@Smox |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Smox_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000110181_5end |
EntrezGene: | Smox |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.12e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.12e-08 | 3 |
branched duct epithelial cell | 2.12e-08 | 3 |
epithelial cell of lower respiratory tract | 2.12e-08 | 3 |
respiratory epithelial cell | 2.12e-08 | 3 |
tracheal epithelial cell | 2.12e-08 | 3 |
tracheoblast | 2.12e-08 | 3 |
neuron of the substantia nigra | 5.00e-08 | 3 |
embryonic cell | 7.95e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.12e-08 | 3 |
respiratory airway | 2.12e-08 | 3 |
tracheobronchial tree | 2.12e-08 | 3 |
lower respiratory tract | 2.12e-08 | 3 |
substantia nigra | 5.00e-08 | 3 |
telencephalic nucleus | 5.00e-08 | 3 |
midbrain nucleus | 5.00e-08 | 3 |
neural nucleus | 5.00e-08 | 3 |
nucleus of brain | 5.00e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.50e-08 | 3 |
muscle cancer | 1.50e-08 | 3 |