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FFCP PHASE1:Mm9::chr1:75260770..75260794,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:75260770..75260794,-
|DHSsupport=NA
|short_description=p2@Ptprn
|DPIdataset=NA
|description=CAGE_peak_2_at_Ptprn_5end
|association_with_transcript=0bp_to_ENSMUST00000027404,NM_008985,uc007boq.1,uc007bor.1,uc011wnn.1_5end
|EntrezGene=19275
|EntrezGene=19275
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A6MDD2,Q3UTI6,Q6NVE2
|UniProt=A6MDD2,Q3UTI6,Q6NVE2
|association_with_transcript=0bp_to_ENSMUST00000027404,NM_008985,uc007boq.1,uc007bor.1,uc011wnn.1_5end
|cluster_id=chr1:75260770..75260794,-
|description=CAGE_peak_2_at_Ptprn_5end
|id=chr1:75260770..75260794,-
|ontology_enrichment_celltype=CL:0000055!4.79e-15!50;CL:0002319!6.78e-15!43;CL:0000221!9.28e-15!44;CL:0000133!9.28e-15!44;CL:0000393!1.86e-12!39;CL:0000211!1.86e-12!39;CL:0000540!1.41e-11!33;CL:0000047!1.41e-11!33;CL:0000031!1.41e-11!33;CL:0000404!1.41e-11!33;CL:0000117!5.10e-09!23;CL:0000337!5.10e-09!23;CL:0002321!3.89e-08!70;CL:0000220!3.89e-08!70
|ontology_enrichment_celltype_v019_2=CL:0002319,1.19e-15,43;CL:0000221,5.83e-15,44;CL:0000133,5.83e-15,44;CL:0000393,5.64e-12,39;CL:0000211,5.64e-12,39;CL:0000540,1.12e-11,33;CL:0000047,1.12e-11,33;CL:0000031,1.12e-11,33;CL:0000404,1.12e-11,33;CL:0000117,5.47e-09,23;CL:0000337,5.47e-09,23;CL:0002321,2.40e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.72e-36!75;UBERON:0001016!2.72e-36!75;UBERON:0001017!2.01e-35!73;UBERON:0005743!2.01e-35!73;UBERON:0004121!1.81e-31!102;UBERON:0000924!1.81e-31!102;UBERON:0006601!1.81e-31!102;UBERON:0002346!2.36e-31!71;UBERON:0003075!2.36e-31!71;UBERON:0007284!2.36e-31!71;UBERON:0001049!1.70e-26!52;UBERON:0005068!1.70e-26!52;UBERON:0006241!1.70e-26!52;UBERON:0007135!1.70e-26!52;UBERON:0000955!1.44e-25!50;UBERON:0006238!1.44e-25!50;UBERON:0002616!7.83e-25!49;UBERON:0000033!1.14e-23!63;UBERON:0003056!6.59e-20!49;UBERON:0003080!1.81e-19!40;UBERON:0002780!8.69e-19!39;UBERON:0001890!8.69e-19!39;UBERON:0006240!8.69e-19!39;UBERON:0002020!2.08e-16!34;UBERON:0002791!1.01e-13!29;UBERON:0003528!1.01e-13!29;UBERON:0001893!1.01e-13!29;UBERON:0007811!2.06e-10!86;UBERON:0000956!1.94e-09!21;UBERON:0001869!1.94e-09!21;UBERON:0000203!1.94e-09!21;UBERON:0002619!2.44e-09!17;UBERON:0002021!3.43e-08!10;UBERON:0000411!3.43e-08!10;UBERON:0001950!3.43e-08!10;UBERON:0003076!1.54e-07!12;UBERON:0003057!1.54e-07!12;UBERON:0000153!2.33e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.87e-41,75;UBERON:0001017,4.39e-40,73;UBERON:0004121,1.09e-32,95;UBERON:0000924,1.09e-32,95;UBERON:0006601,1.09e-32,95;UBERON:0000073,1.93e-31,54;UBERON:0002346,6.06e-31,64;UBERON:0003075,6.06e-31,64;UBERON:0007284,6.06e-31,64;UBERON:0001049,7.87e-30,52;UBERON:0005068,7.87e-30,52;UBERON:0006241,7.87e-30,52;UBERON:0007135,7.87e-30,52;UBERON:0000955,2.63e-26,47;UBERON:0006238,2.63e-26,47;UBERON:0002616,1.93e-25,46;UBERON:0010371,5.00e-24,73;UBERON:0010314,1.21e-23,92;UBERON:0003080,2.30e-21,40;UBERON:0003056,5.48e-21,49;UBERON:0002780,1.50e-20,39;UBERON:0001890,1.50e-20,39;UBERON:0006240,1.50e-20,39;UBERON:0002020,1.12e-17,34;UBERON:0003528,1.84e-14,29;UBERON:0002791,1.84e-14,29;UBERON:0001893,1.84e-14,29;UBERON:0002619,2.28e-10,17;UBERON:0002021,1.19e-09,10;UBERON:0000411,1.19e-09,10;UBERON:0001950,1.19e-09,10;UBERON:0000956,2.22e-09,21;UBERON:0001869,2.22e-09,21;UBERON:0000203,2.22e-09,21;UBERON:0003076,7.43e-09,12;UBERON:0003057,7.43e-09,12;UBERON:0001894,4.18e-07,10;UBERON:0006222,4.18e-07,10
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,2.75320128242522,8.60630478782843,4.57852828398938,5.27246838562732,3.69416808241138,5.31948402176378,5.75010257459886,0,0,0,10.0331180054019,4.01146815914259,3.09403255366465,5.86717736492834,8.99284664762456,7.60597684207415,10.8430250262122,7.11435836888911,0.449949858640699,1.97773272513395,0,3.89480143673926,1.15265491596466,0.518448061542388,0.810035629990144,1.26194976810829,20.5668708770739,18.1112203580323,1.10241719293459,0.670918297127655,1.83843757322004,40.7428759697738,33.1987079021488,30.26048705148,7.38563211289086,9.33173964744578,6.77187381723788,34.0603258781685,37.7050948721226,37.2827724575417,19.4454866412621,14.9490264839058,8.76077395378913,3.25622631332691,4.83657984683427,0,0,0,0.539703191637817,0,0,2.66844398250329,0.170430322578058,0,0,0.704217098883403,0,0,0,2.16491041011214,2.78695852022608,1.51657333504435,0.68510327831436,0,8.31275978763019,3.64319186208885,7.61163695780353,4.15107895060905,3.76806601381556,6.11461277105665,2.63899841792318,0,0.144599356919912,0,0.161766849947409,0,0,0,24.3008061519584,20.3163305609051,0.510914110417183,0.11981512450592,0,0,50.0300735612108,71.3700940397057,9.42407640846483,74.3968090422943,73.1346207964745,38.6485762880782,54.9997881799698,0,0.124406970610093,0,2.94618598241064,0.260240885925407,0.689706313300419,1.62055916824814,1.50704817835715,2.04109497453984,1.5373646434182,2.15513966487376,6.98499100995342,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0.540186184383045,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,66.4516237462642,9.67303356365274,0,0.264450566663544,0.426576501070468,1.16118335930219,0.902072229254653,0.80673409849337,0.889512175379481,0.951128130562796,0,0.823494773620054,0.754005626400808,0.795825888164603,0.779856348476481,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.799739588268102,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,35.3211297973142,33.2881189921857,14.2623402477708,0,3.47059041357882,3.90438744296638,6.46270193198397,2.15071918157297,2.89638276307112,2.54768877709949,4.45291771842384,9.05993159525067,6.7198922250909,52.6966958931764,0.141940085208269,0,0,0,2.65490276679926,2.18502572539483,1.209294227859,0.943025398779491,1.77181135728464,3.68922177532713,1.03371317267288,1.45413491791002,0.356497378384721,2.21225730555071,0,0,55.4916557378674,1.44048875225048,3.10460841078611,6.64444808597936,15.7832807941623,19.6205699362278,20.404078554663,59.6751300264615,2.81606049676452,0.21183207086382,1.98475558249466,0,0,0,0,0,0.582961673259701,38.197612214165,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0.87345025498471,0.539457385539283,0.826534557253359,0.785267825952089,0.518459893167171,0,0,0,0,0,0,0.337912250981556,0,0,0.209718688851422,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,1.10992976687032,8.70224409111914,4.19711540910196,1.73870634628971,0,0,0.428736758158132,0,57.6046879469408,54.3183779078469,50.4148051826669,59.6330542732596,54.8066015816514,47.5898155355511,49.9516650171536,65.296574467512,55.7365163050572,66.7910802159848,0.207574695168353,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,3.12533964365024,2.22246727801615,2.47242068686673,3.53011130550997,1.76888048234658,1.52087579934144,2.82939512079114,2.52832070168682,1.72867911493147,2.01024141344646,0.952587382566147,2.0859178670074,1.54327376370964,0.824171801606613,3.23837624295674,2.40008476669791,1.59728225543404,2.62279808942053,1.74415699958794,1.88218760830661,3.13074049199203,2.92684756596436,1.8414879800649,2.17286582153379,0.561142271657738,2.13543032623513,2.1670986122624,1.22769312950907,1.70430525304563,1.92906610981141,3.74715866906919,1.63752125911786,2.36358159453128,1.14772999241306,0.882365676478062,0.695603506861264
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,2.75320128242522,8.60630478782843,4.57852828398938,5.27246838562732,3.69416808241138,5.31948402176378,5.75010257459886,0,0,0,10.0331180054019,4.01146815914259,3.09403255366465,5.86717736492834,8.99284664762456,7.60597684207415,10.8430250262122,7.11435836888911,0.449949858640699,1.97773272513395,0,3.89480143673926,1.15265491596466,0.518448061542388,0.810035629990144,1.26194976810829,20.5668708770739,18.1112203580323,1.10241719293459,0.670918297127655,1.83843757322004,40.7428759697738,33.1987079021488,30.26048705148,7.38563211289086,9.33173964744578,6.77187381723788,34.0603258781685,37.7050948721226,37.2827724575417,19.4454866412621,14.9490264839058,8.76077395378913,3.25622631332691,4.83657984683427,0,0,0,0.539703191637817,0,0,2.66844398250329,0.170430322578058,0,0,0.704217098883403,0,0,0,2.16491041011214,2.78695852022608,1.51657333504435,0.68510327831436,0,8.31275978763019,3.64319186208885,7.61163695780353,4.15107895060905,3.76806601381556,6.11461277105665,2.63899841792318,0,0.144599356919912,0,0.161766849947409,0,0,0,24.3008061519584,20.3163305609051,0.510914110417183,0.11981512450592,0,0,50.0300735612108,71.3700940397057,9.42407640846483,74.3968090422943,73.1346207964745,38.6485762880782,54.9997881799698,0,0.124406970610093,0,2.94618598241064,0.260240885925407,0.689706313300419,1.62055916824814,1.50704817835715,2.04109497453984,1.5373646434182,2.15513966487376,6.98499100995342,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0.540186184383045,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,66.4516237462642,9.67303356365274,0,0.264450566663544,0.426576501070468,1.16118335930219,0.902072229254653,0.80673409849337,0.889512175379481,0.951128130562796,0,0.823494773620054,0.754005626400808,0.795825888164603,0.779856348476481,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.799739588268102,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,35.3211297973142,33.2881189921857,14.2623402477708,0,3.47059041357882,3.90438744296638,6.46270193198397,2.15071918157297,2.89638276307112,2.54768877709949,4.45291771842384,9.05993159525067,6.7198922250909,52.6966958931764,0.141940085208269,0,0,0,2.65490276679926,2.18502572539483,1.209294227859,0.943025398779491,1.77181135728464,3.68922177532713,1.03371317267288,1.45413491791002,0.356497378384721,2.21225730555071,0,0,55.4916557378674,1.44048875225048,3.10460841078611,6.64444808597936,15.7832807941623,19.6205699362278,20.404078554663,59.6751300264615,2.81606049676452,0.21183207086382,1.98475558249466,0,0,0,0,0,0.582961673259701,38.197612214165,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0.87345025498471,0.539457385539283,0.826534557253359,0.785267825952089,0.518459893167171,0,0,0,0,0,0,0.337912250981556,0,0,0.209718688851422,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,1.10992976687032,8.70224409111914,4.19711540910196,1.73870634628971,0,0,0.428736758158132,0,57.6046879469408,54.3183779078469,50.4148051826669,59.6330542732596,54.8066015816514,47.5898155355511,49.9516650171536,65.296574467512,55.7365163050572,66.7910802159848,0.207574695168353,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,3.12533964365024,2.22246727801615,2.47242068686673,3.53011130550997,1.76888048234658,1.52087579934144,2.82939512079114,2.52832070168682,1.72867911493147,2.01024141344646,0.952587382566147,2.0859178670074,1.54327376370964,0.824171801606613,3.23837624295674,2.40008476669791,1.59728225543404,2.62279808942053,1.74415699958794,1.88218760830661,3.13074049199203,2.92684756596436,1.8414879800649,2.17286582153379,0.561142271657738,2.13543032623513,2.1670986122624,1.22769312950907,1.70430525304563,1.92906610981141,3.74715866906919,1.63752125911786,2.36358159453128,1.14772999241306,0.882365676478062,0.695603506861264
|short_description=p2@Ptprn
}}
}}

Latest revision as of 15:20, 1 October 2015

Short description:p2@Ptprn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ptprn_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000027404, NM_008985, uc007boq.1, uc007bor.1, uc011wnn.1_5end
EntrezGene:Ptprn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ptprn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F94.84
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I220.32
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A450.03
corpus striatum, adult.CNhs10487.19-21D871.37
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D574.40
cortex, neonate N30.CNhs11107.1392-42F273.13
diencephalon, adult.CNhs10482.20-12F238.65
diencephalon, neonate N30.CNhs11201.1388-42B255.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E866.45
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C235.32
medulla oblongata, neonate N30.CNhs11200.1396-42A333.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I952.70
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G855.49
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F619.62
pituitary gland, embryo E17.CNhs11039.1265-44F520.40
pituitary gland, neonate N00.CNhs11190.1308-22E959.68
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C938.20
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A547.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A765.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A855.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A966.79
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.19e-1543
ectodermal cell5.83e-1544
neurectodermal cell5.83e-1544
electrically responsive cell5.64e-1239
electrically active cell5.64e-1239
neuron1.12e-1133
neuronal stem cell1.12e-1133
neuroblast1.12e-1133
electrically signaling cell1.12e-1133
CNS neuron (sensu Vertebrata)5.47e-0923
neuroblast (sensu Vertebrata)5.47e-0923
embryonic cell2.40e-0870

Uber anatomy
Ontology termp-valuen
nervous system3.87e-4175
central nervous system4.39e-4073
ectoderm-derived structure1.09e-3295
ectoderm1.09e-3295
presumptive ectoderm1.09e-3295
regional part of nervous system1.93e-3154
neurectoderm6.06e-3164
neural plate6.06e-3164
presumptive neural plate6.06e-3164
neural tube7.87e-3052
neural rod7.87e-3052
future spinal cord7.87e-3052
neural keel7.87e-3052
brain2.63e-2647
future brain2.63e-2647
regional part of brain1.93e-2546
ecto-epithelium5.00e-2473
structure with developmental contribution from neural crest1.21e-2392
anterior neural tube2.30e-2140
pre-chordal neural plate5.48e-2149
regional part of forebrain1.50e-2039
forebrain1.50e-2039
future forebrain1.50e-2039
gray matter1.12e-1734
brain grey matter1.84e-1429
regional part of telencephalon1.84e-1429
telencephalon1.84e-1429
regional part of cerebral cortex2.28e-1017
occipital lobe1.19e-0910
visual cortex1.19e-0910
neocortex1.19e-0910
cerebral cortex2.22e-0921
cerebral hemisphere2.22e-0921
pallium2.22e-0921
posterior neural tube7.43e-0912
chordal neural plate7.43e-0912
diencephalon4.18e-0710
future diencephalon4.18e-0710
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