FFCP PHASE1:Mm9::chr1:43502559..43502567,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:43502559..43502567,+ to FFCP PHASE1:Mm9::chr1:43502559..43502567,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17974 | |EntrezGene=17974 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=O55033,Q8BQ28 | |UniProt=O55033,Q8BQ28 | ||
|association_with_transcript=-28bp_to_ENSMUST00000086421,ENSMUST00000114744,ENSMUST00000136648,NM_010879,uc007avn.1,uc007avo.2_5end | |||
|cluster_id=chr1:43502559..43502567,+ | |||
|description=CAGE_peak_5_at_Nck2_5end | |||
|id=chr1:43502559..43502567,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-08!33;CL:0000047!1.42e-08!33;CL:0000031!1.42e-08!33;CL:0000404!1.42e-08!33;CL:0002321!3.31e-08!70;CL:0000220!3.31e-08!70;CL:0000221!1.06e-07!44;CL:0000133!1.06e-07!44;CL:0002319!3.44e-07!43;CL:0000117!4.72e-07!23;CL:0000337!4.72e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.78e-21,6;CL:0002293,2.59e-16,3;CL:0000066,3.81e-09,25;CL:0002321,1.22e-08,70;CL:0002076,2.48e-08,15;CL:0002608,6.14e-08,3;CL:0000117,1.50e-07,23;CL:0000337,1.50e-07,23;CL:0000075,8.53e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.77e-07!86;UBERON:0000153!7.84e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.56e-08,29;UBERON:0002791,8.56e-08,29;UBERON:0001893,8.56e-08,29 | |||
|phase1_expression=0.640595388419176,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0.503637815735669,0.934450562382103,0.258246646883153,0,0,0,0,0.171200729931206,0.34968160967599,0.333109761815663,0,0.699561878128147,0,0,0,0,0.198581902401771,0.261199789138935,0,0.22940928106717,0.57423196411502,0.86152399231815,1.07735616342945,0,0,0.665191531965914,0,0,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0.286533439938757,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0.889294796111139,0.899899717281399,0,0,0,0.384218305321555,1.34796496001021,1.62007125998029,1.47227472945967,0.571301968807607,0.220868540951614,0.979926393719632,1.82106394934649,1.83843757322004,0,0.638436690425939,0.307213066512487,0.791317726381163,0.731901148819277,1.04182674111352,0.558365998002762,0,0.763991238884051,0,0.427115042397309,0.372798891650601,0.227178579999552,0.906858721281426,0.869593466105033,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0.35333957451034,1.12674735821344,1.28326477414318,2.54805239706646,7.11066703153331,0,0.506719730950197,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0.457500602818626,1.00523481690292,0,0,0.62336413367868,0,0.509196819251581,0.124406970610093,0.758168275301024,0.210441855886474,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.680364991513279,0.512454881139399,0.468508622798644,0,1.07783996466421,0.189106080167819,0.175951124163949,0,0,1.0447564995665,0,0.59710280045548,0,0,0,1.03562886267751,0.469052119962192,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0,0,0.219550115291051,0.268412837520744,0.420579897128254,0.514523061896422,0.330418782983798,0,0.426576501070468,0.928946687441754,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0.648414149624083,0.398282546508734,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.493588655687202,0,0,0.393117990226406,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.876767573733936,0.395287777946524,0,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0,0.302323556964751,0,0,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0,0.619160603889667,0,0.376736914009382,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0.41326727862668,0,0.388844919875379,0.621339313086926,0.56369293868419,0.598066184175915,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0.993406773906324,0.961563596159751,0.295379054349154,0.403865799792591,0.914481679859998,0.201652370273681,0.779663045918019,1.05833025804362,0.818138315270983,0,0,0.448569283047378,0,0.386379188064381,0,0.36630324853453,0,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0.415149390336707,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.561849044819294,0.256100609619477,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0,0.145346416632329,0.376437521661322,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.593175090620871,0.788035859004508,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0,0,0.231867835620421 | |phase1_expression=0.640595388419176,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0.503637815735669,0.934450562382103,0.258246646883153,0,0,0,0,0.171200729931206,0.34968160967599,0.333109761815663,0,0.699561878128147,0,0,0,0,0.198581902401771,0.261199789138935,0,0.22940928106717,0.57423196411502,0.86152399231815,1.07735616342945,0,0,0.665191531965914,0,0,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0.286533439938757,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0.889294796111139,0.899899717281399,0,0,0,0.384218305321555,1.34796496001021,1.62007125998029,1.47227472945967,0.571301968807607,0.220868540951614,0.979926393719632,1.82106394934649,1.83843757322004,0,0.638436690425939,0.307213066512487,0.791317726381163,0.731901148819277,1.04182674111352,0.558365998002762,0,0.763991238884051,0,0.427115042397309,0.372798891650601,0.227178579999552,0.906858721281426,0.869593466105033,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0.35333957451034,1.12674735821344,1.28326477414318,2.54805239706646,7.11066703153331,0,0.506719730950197,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0.457500602818626,1.00523481690292,0,0,0.62336413367868,0,0.509196819251581,0.124406970610093,0.758168275301024,0.210441855886474,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.680364991513279,0.512454881139399,0.468508622798644,0,1.07783996466421,0.189106080167819,0.175951124163949,0,0,1.0447564995665,0,0.59710280045548,0,0,0,1.03562886267751,0.469052119962192,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0,0,0.219550115291051,0.268412837520744,0.420579897128254,0.514523061896422,0.330418782983798,0,0.426576501070468,0.928946687441754,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0.648414149624083,0.398282546508734,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.493588655687202,0,0,0.393117990226406,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.876767573733936,0.395287777946524,0,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0,0.302323556964751,0,0,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0,0.619160603889667,0,0.376736914009382,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0.41326727862668,0,0.388844919875379,0.621339313086926,0.56369293868419,0.598066184175915,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0.993406773906324,0.961563596159751,0.295379054349154,0.403865799792591,0.914481679859998,0.201652370273681,0.779663045918019,1.05833025804362,0.818138315270983,0,0,0.448569283047378,0,0.386379188064381,0,0.36630324853453,0,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0.415149390336707,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.561849044819294,0.256100609619477,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0,0.145346416632329,0.376437521661322,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.593175090620871,0.788035859004508,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0,0,0.231867835620421 | ||
|short_description=p5@Nck2 | |||
}} | }} |
Latest revision as of 04:02, 27 September 2015
Short description: | p5@Nck2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nck2_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -28bp_to_ENSMUST00000086421, ENSMUST00000114744, ENSMUST00000136648, NM_010879, uc007avn.1, uc007avo.2_5end |
EntrezGene: | Nck2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.78e-21 | 6 |
epithelial cell of thymus | 2.59e-16 | 3 |
epithelial cell | 3.81e-09 | 25 |
embryonic cell | 1.22e-08 | 70 |
endo-epithelial cell | 2.48e-08 | 15 |
hippocampal neuron | 6.14e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.50e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.50e-07 | 23 |
columnar/cuboidal epithelial cell | 8.53e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 8.56e-08 | 29 |
regional part of telencephalon | 8.56e-08 | 29 |
telencephalon | 8.56e-08 | 29 |