FFCP PHASE1:Mm9::chr1:33964865..33964910,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:33964865..33964910,+ to FFCP PHASE1:Mm9::chr1:33964865..33964910,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13518 | |EntrezGene=13518 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_uc007aof.1_5end | |||
|cluster_id=chr1:33964865..33964910,+ | |||
|description=CAGE_peak_5_at_Dst_5end | |||
|id=chr1:33964865..33964910,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.07e-11!50;CL:0000393!1.81e-10!39;CL:0000211!1.81e-10!39;CL:0002319!2.06e-09!43;CL:0000221!4.79e-09!44;CL:0000133!4.79e-09!44;CL:0000540!5.63e-08!33;CL:0000047!5.63e-08!33;CL:0000031!5.63e-08!33;CL:0000404!5.63e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.77e-11,39;CL:0000211,3.77e-11,39;CL:0002319,1.71e-09,43;CL:0000221,5.85e-09,44;CL:0000133,5.85e-09,44;CL:0000540,2.30e-08,33;CL:0000047,2.30e-08,33;CL:0000031,2.30e-08,33;CL:0000404,2.30e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-20!75;UBERON:0001016!1.13e-20!75;UBERON:0001017!5.40e-20!73;UBERON:0005743!5.40e-20!73;UBERON:0004121!1.87e-16!102;UBERON:0000924!1.87e-16!102;UBERON:0006601!1.87e-16!102;UBERON:0001049!1.63e-13!52;UBERON:0005068!1.63e-13!52;UBERON:0006241!1.63e-13!52;UBERON:0007135!1.63e-13!52;UBERON:0000955!2.02e-13!50;UBERON:0006238!2.02e-13!50;UBERON:0002616!6.40e-13!49;UBERON:0002346!9.10e-13!71;UBERON:0003075!9.10e-13!71;UBERON:0007284!9.10e-13!71;UBERON:0000033!6.72e-11!63;UBERON:0002020!3.84e-10!34;UBERON:0003080!1.53e-08!40;UBERON:0002791!1.82e-08!29;UBERON:0003528!1.82e-08!29;UBERON:0001893!1.82e-08!29;UBERON:0000025!4.57e-08!114;UBERON:0002780!5.34e-08!39;UBERON:0001890!5.34e-08!39;UBERON:0006240!5.34e-08!39;UBERON:0003056!6.43e-08!49;UBERON:0004111!9.52e-08!122;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.51e-21,75;UBERON:0001017,2.01e-20,73;UBERON:0004121,3.66e-15,95;UBERON:0000924,3.66e-15,95;UBERON:0006601,3.66e-15,95;UBERON:0000073,1.87e-14,54;UBERON:0010314,8.92e-14,92;UBERON:0001049,3.81e-13,52;UBERON:0005068,3.81e-13,52;UBERON:0006241,3.81e-13,52;UBERON:0007135,3.81e-13,52;UBERON:0002346,3.02e-12,64;UBERON:0003075,3.02e-12,64;UBERON:0007284,3.02e-12,64;UBERON:0000955,4.38e-11,47;UBERON:0006238,4.38e-11,47;UBERON:0002616,1.44e-10,46;UBERON:0002020,4.44e-10,34;UBERON:0010371,3.41e-09,73;UBERON:0003528,3.20e-08,29;UBERON:0002791,3.20e-08,29;UBERON:0001893,3.20e-08,29;UBERON:0000025,6.24e-08,114;UBERON:0002021,7.88e-08,10;UBERON:0000411,7.88e-08,10;UBERON:0001950,7.88e-08,10;UBERON:0003080,8.42e-08,40;UBERON:0004111,2.57e-07,122;UBERON:0002780,3.10e-07,39;UBERON:0001890,3.10e-07,39;UBERON:0006240,3.10e-07,39;UBERON:0003076,4.41e-07,12;UBERON:0003057,4.41e-07,12 | |||
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| ||
|short_description=p5@Dst | |||
}} | }} |
Latest revision as of 01:46, 27 September 2015
Short description: | p5@Dst |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dst_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -159bp_to_uc007aof.1_5end |
EntrezGene: | Dst |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.77e-11 | 39 |
electrically active cell | 3.77e-11 | 39 |
neural cell | 1.71e-09 | 43 |
ectodermal cell | 5.85e-09 | 44 |
neurectodermal cell | 5.85e-09 | 44 |
neuron | 2.30e-08 | 33 |
neuronal stem cell | 2.30e-08 | 33 |
neuroblast | 2.30e-08 | 33 |
electrically signaling cell | 2.30e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.51e-21 | 75 |
central nervous system | 2.01e-20 | 73 |
ectoderm-derived structure | 3.66e-15 | 95 |
ectoderm | 3.66e-15 | 95 |
presumptive ectoderm | 3.66e-15 | 95 |
regional part of nervous system | 1.87e-14 | 54 |
structure with developmental contribution from neural crest | 8.92e-14 | 92 |
neural tube | 3.81e-13 | 52 |
neural rod | 3.81e-13 | 52 |
future spinal cord | 3.81e-13 | 52 |
neural keel | 3.81e-13 | 52 |
neurectoderm | 3.02e-12 | 64 |
neural plate | 3.02e-12 | 64 |
presumptive neural plate | 3.02e-12 | 64 |
brain | 4.38e-11 | 47 |
future brain | 4.38e-11 | 47 |
regional part of brain | 1.44e-10 | 46 |
gray matter | 4.44e-10 | 34 |
ecto-epithelium | 3.41e-09 | 73 |
brain grey matter | 3.20e-08 | 29 |
regional part of telencephalon | 3.20e-08 | 29 |
telencephalon | 3.20e-08 | 29 |
tube | 6.24e-08 | 114 |
occipital lobe | 7.88e-08 | 10 |
visual cortex | 7.88e-08 | 10 |
neocortex | 7.88e-08 | 10 |
anterior neural tube | 8.42e-08 | 40 |
anatomical conduit | 2.57e-07 | 122 |
regional part of forebrain | 3.10e-07 | 39 |
forebrain | 3.10e-07 | 39 |
future forebrain | 3.10e-07 | 39 |
posterior neural tube | 4.41e-07 | 12 |
chordal neural plate | 4.41e-07 | 12 |