FFCP PHASE1:Mm9::chr1:184447695..184447746,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:184447695..184447746,- to FFCP PHASE1:Mm9::chr1:184447695..184447746,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12334 | |EntrezGene=12334 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O08529 | |UniProt=O08529 | ||
|association_with_transcript=-40bp_to_ENSMUST00000068505_5end | |||
|cluster_id=chr1:184447695..184447746,- | |||
|description=CAGE_peak_2_at_Capn2_5end | |||
|id=chr1:184447695..184447746,- | |||
|ontology_enrichment_celltype=CL:0000055!2.91e-14!50;CL:0000221!5.59e-13!44;CL:0000133!5.59e-13!44;CL:0002319!1.48e-12!43;CL:0000393!4.36e-12!39;CL:0000211!4.36e-12!39;CL:0000117!3.01e-10!23;CL:0000337!3.01e-10!23;CL:0000540!1.35e-09!33;CL:0000047!1.35e-09!33;CL:0000031!1.35e-09!33;CL:0000404!1.35e-09!33;CL:0002321!5.93e-07!70;CL:0000220!5.93e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.54e-13,44;CL:0000133,5.54e-13,44;CL:0002319,1.46e-12,43;CL:0000393,4.32e-12,39;CL:0000211,4.32e-12,39;CL:0000117,2.99e-10,23;CL:0000337,2.99e-10,23;CL:0000540,1.34e-09,33;CL:0000047,1.34e-09,33;CL:0000031,1.34e-09,33;CL:0000404,1.34e-09,33;CL:0002321,4.27e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.83e-15!73;UBERON:0005743!7.83e-15!73;UBERON:0000073!1.92e-14!75;UBERON:0001016!1.92e-14!75;UBERON:0004121!1.04e-12!102;UBERON:0000924!1.04e-12!102;UBERON:0006601!1.04e-12!102;UBERON:0001049!3.90e-10!52;UBERON:0005068!3.90e-10!52;UBERON:0006241!3.90e-10!52;UBERON:0007135!3.90e-10!52;UBERON:0000033!5.47e-10!63;UBERON:0002346!5.56e-09!71;UBERON:0003075!5.56e-09!71;UBERON:0007284!5.56e-09!71;UBERON:0000955!2.08e-08!50;UBERON:0006238!2.08e-08!50;UBERON:0000153!4.66e-08!94;UBERON:0002616!5.00e-08!49;UBERON:0000025!1.30e-07!114;UBERON:0003056!2.40e-07!49;UBERON:0004111!2.87e-07!122;UBERON:0002020!3.27e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.74e-15,73;UBERON:0001016,1.90e-14,75;UBERON:0004121,2.44e-14,95;UBERON:0000924,2.44e-14,95;UBERON:0006601,2.44e-14,95;UBERON:0010314,1.40e-11,92;UBERON:0002346,1.12e-10,64;UBERON:0003075,1.12e-10,64;UBERON:0007284,1.12e-10,64;UBERON:0000073,1.13e-10,54;UBERON:0010371,2.41e-10,73;UBERON:0001049,3.87e-10,52;UBERON:0005068,3.87e-10,52;UBERON:0006241,3.87e-10,52;UBERON:0007135,3.87e-10,52;UBERON:0000955,1.18e-07,47;UBERON:0006238,1.18e-07,47;UBERON:0000025,1.29e-07,114;UBERON:0003056,2.38e-07,49;UBERON:0002616,2.79e-07,46;UBERON:0004111,2.85e-07,122;UBERON:0002020,3.26e-07,34 | |||
|phase1_expression=33.6312578920067,0,0.454999239389536,0,0,0.503637815735669,0.467225281191051,21.6927183381848,0.563154888606667,0.936258105287974,0.513653904676515,0,15.4080656938085,14.4243663991346,0.999329285446988,3.23960427823721,0.699561878128147,6.30924330716475,6.03303507865251,8.06340338416257,11.3107575900923,3.17731043842833,5.74639536105658,0.319984845586813,1.83527424853736,1.14846392823004,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,1.55211357458713,1.27006134691926,1.23012957516914,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0,29.8375458602118,28.5882946039031,19.8230492334616,33.6428278069657,20.7123898561424,31.4151241310295,29.9422044574396,22.397827460058,30.188038516644,3.35565212115473,14.5072428402269,7.05796978199174,21.3525331909836,22.9226751951005,25.7836046138721,32.9775831201144,34.3844136526821,27.8885817542719,19.3141383279405,18.6751907183339,3.1496490104849,3.9554654502679,2.1314403448383,18.5752068521411,24.974189845901,21.048991298621,21.8709620097339,19.1395714829758,39.4198358477249,35.5598350932098,18.1286382838132,12.7474476454254,22.0612508786405,17.6185409599022,25.9205296312931,20.7368819895929,31.1251639043257,24.5186884854458,24.4829284161677,25.1264699101243,19.6966913511088,26.1285003698345,43.0157734791555,38.2979821349587,38.0254869483613,13.5549886066399,12.7715936580468,7.8263411949453,2.58127163094416,5.439770669662,3.77792234146472,6.49776417447669,1.34408066129201,7.72444310724635,28.6322941931137,20.7828803682295,26.5004680882755,23.380007682929,39.7812079984385,50.9610479413291,85.3280043783997,10.6080610095495,13.4280728701802,14.1546844604139,5.59501010623394,3.36619248741323,7.27366481417641,16.4811060427829,9.13396434936424,12.4532368518272,7.83757730873637,8.58397562090645,10.6816602630224,13.3485282576562,15.9059292611903,5.30766331169925,23.4561932423743,10.1587098491781,6.30337829075789,0,12.296793474485,13.4045892360611,1.78819938646014,5.03223522924865,2.99951365496704,4.44745794755726,15.7280171375064,11.8950156732843,29.0261553380717,12.8629996942285,13.2972037811772,15.584103341967,17.8465389374533,32.9959538875025,10.3257785606377,9.85618757891331,3.99839526184301,23.4216797332867,22.9902104433473,21.2473313170312,20.3451504078215,21.7036432292736,17.6796933993093,19.1151518101847,10.3481348295606,15.9520314770303,26.8530633838303,26.2167175004284,28.4954452155847,20.5754964426942,19.5021213252413,20.1666493679785,14.927570011387,1.40442637462647,1.80143534980301,1.98914449576915,18.2270679831242,16.8858763186389,16.2055855314913,20.5967919959133,16.9217239302767,17.4321837562737,14.1845706297749,18.5108646965737,17.3980360127083,22.2155797383199,16.2525789438304,15.8084178614419,15.0585987048092,12.953456802172,12.8838162009957,14.5100064509248,30.6655744890268,1.32167513193519,2.11560453330835,15.1434657880016,16.7210403739516,13.4022159774977,9.4791256572971,8.2279876222602,10.6526350623033,4.2707615539006,6.75265714368445,6.28338022000674,6.56556357735798,7.79856348476481,6.29173586057955,1.94524244887225,2.78797782556114,16.5011073829181,16.3375373031912,18.0332377076929,17.7176655225423,19.0073437424273,23.9163145825986,24.0298841072178,20.8130308651239,18.5258498852822,17.7691916047393,3.55743152504579,5.00535317148282,3.53806191203765,4.49724224769707,5.27436315610108,4.82354319504834,4.83789118384698,6.61701116136864,4.86405680325106,6.58947391651396,5.75072826109418,8.55924179637558,10.9213185590096,8.33510297225469,4.84373016509163,4.82443521363367,21.2466168691595,18.1911755299665,17.9261474086228,16.4652733201932,16.4283173801951,16.0806007144143,19.9956658344252,23.0257704472203,27.1132447862649,22.1464689648775,38.9069635524269,18.5165545628784,21.9309926969687,17.0685889126184,3.01582567878545,2.71952841909355,3.44234991113325,4.69092468718045,19.1055202085472,25.5521476771003,17.3771042099276,14.1383719234449,14.1978698737316,10.9322848403059,13.3562506594335,15.2940030689633,17.6010952525091,22.3630459323178,14.1683745586213,19.8733983379692,13.4397844501818,24.0990987316355,14.9037089468682,29.0246933977626,29.8083135617044,12.5377293459127,3.98235415019888,16.2663026223838,9.67435382287203,6.78978287121233,4.42952839321159,9.53048958626175,11.3708448994017,10.1789444253702,15.329387270543,6.95280867458795,5.27093042874994,11.3449097573006,6.80879211507576,23.4079422240703,26.6478888592474,22.076714608254,18.9754049997233,26.5769538227085,23.6950589667054,16.4411072521884,4.92810586933792,6.99045833850607,3.30792597082443,7.91454014119104,18.729873496725,18.8176325775846,14.9215430003921,14.4443991775654,3.78925087618806,20.5822085231666,7.00570611271196,16.717336305021,6.66700298530962,4.89757988212197,3.55404992074665,5.0331198105435,8.32894306969891,7.13752406850656,6.77179871641677,4.77335309007557,15.0259596951039,19.1120299099238,15.4447637375176,15.0543573130417,12.4466661335321,13.3515702920973,18.2664137152992,9.16145796944104,5.31421390496351,13.6694648879124,0.56369293868419,9.56905894681464,11.2511773510826,20.222923587781,20.5364119329592,19.5989105569303,18.5424437060291,17.0567744145575,6.71099804324549,0.724752362478018,2.01621004380506,9.79634473947353,20.8806971748869,13.1470025170979,9.48422007737904,9.48841487037652,10.1327490938445,12.8609130986367,9.7475087935221,10.5005107946074,11.964468644835,8.57022573663144,9.55087231249574,8.08179469778768,12.5058285334279,11.1097887971454,5.99362074109975,6.10054224944435,4.86865387455827,7.92077335531981,8.07034644440082,11.9048555773722,11.3615240911905,7.02200945649509,13.5540442228096,17.4923589872727,17.1868654031819,17.8727309637435,10.9613203163303,13.5970901530146,12.8254275044043,17.5625269257446,8.15656336171568,15.0150490408028,17.2286996989733,28.3307660114732,21.8539015365292,18.2330037801221,16.9786661728666,23.3481255731518,14.0015438515018,15.658664350156,16.3668796891826,12.8875577999537,12.9274442944022,15.6559863350443,20.694773150844,19.3996211786754,18.3793500657962,20.4806287251722,20.2797570403497,18.1334667235883,19.7801232385587,17.6638704161277,15.0862471049583,16.8602015851371,20.028639955575,17.7322628291441,18.0690010397435,18.7844429519522,19.2074371516411,14.4688341290814,19.69159650765,20.7622640513363,21.5915732985997,25.4141564528954,14.7323175541088,19.9868525129896,16.2041553224159,21.7335202806013,18.4805970671873,17.1896843238639,17.5985265503336,17.6473135295612,13.6802023016049 | |phase1_expression=33.6312578920067,0,0.454999239389536,0,0,0.503637815735669,0.467225281191051,21.6927183381848,0.563154888606667,0.936258105287974,0.513653904676515,0,15.4080656938085,14.4243663991346,0.999329285446988,3.23960427823721,0.699561878128147,6.30924330716475,6.03303507865251,8.06340338416257,11.3107575900923,3.17731043842833,5.74639536105658,0.319984845586813,1.83527424853736,1.14846392823004,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,1.55211357458713,1.27006134691926,1.23012957516914,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0,29.8375458602118,28.5882946039031,19.8230492334616,33.6428278069657,20.7123898561424,31.4151241310295,29.9422044574396,22.397827460058,30.188038516644,3.35565212115473,14.5072428402269,7.05796978199174,21.3525331909836,22.9226751951005,25.7836046138721,32.9775831201144,34.3844136526821,27.8885817542719,19.3141383279405,18.6751907183339,3.1496490104849,3.9554654502679,2.1314403448383,18.5752068521411,24.974189845901,21.048991298621,21.8709620097339,19.1395714829758,39.4198358477249,35.5598350932098,18.1286382838132,12.7474476454254,22.0612508786405,17.6185409599022,25.9205296312931,20.7368819895929,31.1251639043257,24.5186884854458,24.4829284161677,25.1264699101243,19.6966913511088,26.1285003698345,43.0157734791555,38.2979821349587,38.0254869483613,13.5549886066399,12.7715936580468,7.8263411949453,2.58127163094416,5.439770669662,3.77792234146472,6.49776417447669,1.34408066129201,7.72444310724635,28.6322941931137,20.7828803682295,26.5004680882755,23.380007682929,39.7812079984385,50.9610479413291,85.3280043783997,10.6080610095495,13.4280728701802,14.1546844604139,5.59501010623394,3.36619248741323,7.27366481417641,16.4811060427829,9.13396434936424,12.4532368518272,7.83757730873637,8.58397562090645,10.6816602630224,13.3485282576562,15.9059292611903,5.30766331169925,23.4561932423743,10.1587098491781,6.30337829075789,0,12.296793474485,13.4045892360611,1.78819938646014,5.03223522924865,2.99951365496704,4.44745794755726,15.7280171375064,11.8950156732843,29.0261553380717,12.8629996942285,13.2972037811772,15.584103341967,17.8465389374533,32.9959538875025,10.3257785606377,9.85618757891331,3.99839526184301,23.4216797332867,22.9902104433473,21.2473313170312,20.3451504078215,21.7036432292736,17.6796933993093,19.1151518101847,10.3481348295606,15.9520314770303,26.8530633838303,26.2167175004284,28.4954452155847,20.5754964426942,19.5021213252413,20.1666493679785,14.927570011387,1.40442637462647,1.80143534980301,1.98914449576915,18.2270679831242,16.8858763186389,16.2055855314913,20.5967919959133,16.9217239302767,17.4321837562737,14.1845706297749,18.5108646965737,17.3980360127083,22.2155797383199,16.2525789438304,15.8084178614419,15.0585987048092,12.953456802172,12.8838162009957,14.5100064509248,30.6655744890268,1.32167513193519,2.11560453330835,15.1434657880016,16.7210403739516,13.4022159774977,9.4791256572971,8.2279876222602,10.6526350623033,4.2707615539006,6.75265714368445,6.28338022000674,6.56556357735798,7.79856348476481,6.29173586057955,1.94524244887225,2.78797782556114,16.5011073829181,16.3375373031912,18.0332377076929,17.7176655225423,19.0073437424273,23.9163145825986,24.0298841072178,20.8130308651239,18.5258498852822,17.7691916047393,3.55743152504579,5.00535317148282,3.53806191203765,4.49724224769707,5.27436315610108,4.82354319504834,4.83789118384698,6.61701116136864,4.86405680325106,6.58947391651396,5.75072826109418,8.55924179637558,10.9213185590096,8.33510297225469,4.84373016509163,4.82443521363367,21.2466168691595,18.1911755299665,17.9261474086228,16.4652733201932,16.4283173801951,16.0806007144143,19.9956658344252,23.0257704472203,27.1132447862649,22.1464689648775,38.9069635524269,18.5165545628784,21.9309926969687,17.0685889126184,3.01582567878545,2.71952841909355,3.44234991113325,4.69092468718045,19.1055202085472,25.5521476771003,17.3771042099276,14.1383719234449,14.1978698737316,10.9322848403059,13.3562506594335,15.2940030689633,17.6010952525091,22.3630459323178,14.1683745586213,19.8733983379692,13.4397844501818,24.0990987316355,14.9037089468682,29.0246933977626,29.8083135617044,12.5377293459127,3.98235415019888,16.2663026223838,9.67435382287203,6.78978287121233,4.42952839321159,9.53048958626175,11.3708448994017,10.1789444253702,15.329387270543,6.95280867458795,5.27093042874994,11.3449097573006,6.80879211507576,23.4079422240703,26.6478888592474,22.076714608254,18.9754049997233,26.5769538227085,23.6950589667054,16.4411072521884,4.92810586933792,6.99045833850607,3.30792597082443,7.91454014119104,18.729873496725,18.8176325775846,14.9215430003921,14.4443991775654,3.78925087618806,20.5822085231666,7.00570611271196,16.717336305021,6.66700298530962,4.89757988212197,3.55404992074665,5.0331198105435,8.32894306969891,7.13752406850656,6.77179871641677,4.77335309007557,15.0259596951039,19.1120299099238,15.4447637375176,15.0543573130417,12.4466661335321,13.3515702920973,18.2664137152992,9.16145796944104,5.31421390496351,13.6694648879124,0.56369293868419,9.56905894681464,11.2511773510826,20.222923587781,20.5364119329592,19.5989105569303,18.5424437060291,17.0567744145575,6.71099804324549,0.724752362478018,2.01621004380506,9.79634473947353,20.8806971748869,13.1470025170979,9.48422007737904,9.48841487037652,10.1327490938445,12.8609130986367,9.7475087935221,10.5005107946074,11.964468644835,8.57022573663144,9.55087231249574,8.08179469778768,12.5058285334279,11.1097887971454,5.99362074109975,6.10054224944435,4.86865387455827,7.92077335531981,8.07034644440082,11.9048555773722,11.3615240911905,7.02200945649509,13.5540442228096,17.4923589872727,17.1868654031819,17.8727309637435,10.9613203163303,13.5970901530146,12.8254275044043,17.5625269257446,8.15656336171568,15.0150490408028,17.2286996989733,28.3307660114732,21.8539015365292,18.2330037801221,16.9786661728666,23.3481255731518,14.0015438515018,15.658664350156,16.3668796891826,12.8875577999537,12.9274442944022,15.6559863350443,20.694773150844,19.3996211786754,18.3793500657962,20.4806287251722,20.2797570403497,18.1334667235883,19.7801232385587,17.6638704161277,15.0862471049583,16.8602015851371,20.028639955575,17.7322628291441,18.0690010397435,18.7844429519522,19.2074371516411,14.4688341290814,19.69159650765,20.7622640513363,21.5915732985997,25.4141564528954,14.7323175541088,19.9868525129896,16.2041553224159,21.7335202806013,18.4805970671873,17.1896843238639,17.5985265503336,17.6473135295612,13.6802023016049 | ||
|short_description=p2@Capn2 | |||
}} | }} |
Latest revision as of 22:52, 26 September 2015
Short description: | p2@Capn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Capn2_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENSMUST00000068505_5end |
EntrezGene: | Capn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.54e-13 | 44 |
neurectodermal cell | 5.54e-13 | 44 |
neural cell | 1.46e-12 | 43 |
electrically responsive cell | 4.32e-12 | 39 |
electrically active cell | 4.32e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.99e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.99e-10 | 23 |
neuron | 1.34e-09 | 33 |
neuronal stem cell | 1.34e-09 | 33 |
neuroblast | 1.34e-09 | 33 |
electrically signaling cell | 1.34e-09 | 33 |
embryonic cell | 4.27e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.74e-15 | 73 |
nervous system | 1.90e-14 | 75 |
ectoderm-derived structure | 2.44e-14 | 95 |
ectoderm | 2.44e-14 | 95 |
presumptive ectoderm | 2.44e-14 | 95 |
structure with developmental contribution from neural crest | 1.40e-11 | 92 |
neurectoderm | 1.12e-10 | 64 |
neural plate | 1.12e-10 | 64 |
presumptive neural plate | 1.12e-10 | 64 |
regional part of nervous system | 1.13e-10 | 54 |
ecto-epithelium | 2.41e-10 | 73 |
neural tube | 3.87e-10 | 52 |
neural rod | 3.87e-10 | 52 |
future spinal cord | 3.87e-10 | 52 |
neural keel | 3.87e-10 | 52 |
brain | 1.18e-07 | 47 |
future brain | 1.18e-07 | 47 |
tube | 1.29e-07 | 114 |
pre-chordal neural plate | 2.38e-07 | 49 |
regional part of brain | 2.79e-07 | 46 |
anatomical conduit | 2.85e-07 | 122 |
gray matter | 3.26e-07 | 34 |