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FFCP PHASE1:Mm9::chr1:173341436..173341468,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:173341436..173341468,+
|DHSsupport=NA
|short_description=p1@Usf1
|DPIdataset=NA
|description=CAGE_peak_1_at_Usf1_5end
|association_with_transcript=0bp_to_ENSMUST00000001284,ENSMUST00000159207,ENSMUST00000160335,ENSMUST00000161241,ENSMUST00000161297,uc007doj.1,uc007dok.1_5end
|EntrezGene=22278
|EntrezGene=22278
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=F8WGH6,E0CYP7,Q61069,Q3UQH7,O09135
|UniProt=F8WGH6,E0CYP7,Q61069,Q3UQH7,O09135
|association_with_transcript=0bp_to_ENSMUST00000001284,ENSMUST00000159207,ENSMUST00000160335,ENSMUST00000161241,ENSMUST00000161297,uc007doj.1,uc007dok.1_5end
|cluster_id=chr1:173341436..173341468,+
|description=CAGE_peak_1_at_Usf1_5end
|id=chr1:173341436..173341468,+
|ontology_enrichment_celltype=CL:0002371!1.43e-18!118;CL:0000144!2.53e-17!121;CL:0000012!2.53e-17!121;CL:0000548!1.08e-16!115;CL:0000004!1.08e-16!115;CL:0000255!1.08e-16!115;CL:0002321!9.16e-16!70;CL:0000220!9.16e-16!70;CL:0000055!2.96e-12!50;CL:0000723!5.81e-12!91;CL:0000048!5.81e-12!91;CL:0000221!6.36e-12!44;CL:0000133!6.36e-12!44;CL:0002319!9.77e-12!43;CL:0000117!7.68e-11!23;CL:0000337!7.68e-11!23;CL:0000034!9.20e-10!97;CL:0000393!1.05e-09!39;CL:0000211!1.05e-09!39;CL:0000540!2.80e-09!33;CL:0000047!2.80e-09!33;CL:0000031!2.80e-09!33;CL:0000404!2.80e-09!33;CL:0000063!5.86e-07!66
|ontology_enrichment_celltype_v019_2=CL:0002321,9.16e-16,70;CL:0000723,5.81e-12,91;CL:0000048,5.81e-12,91;CL:0000221,6.36e-12,44;CL:0000133,6.36e-12,44;CL:0002319,9.77e-12,43;CL:0000117,7.68e-11,23;CL:0000337,7.68e-11,23;CL:0000034,9.20e-10,97;CL:0000393,1.05e-09,39;CL:0000211,1.05e-09,39;CL:0000540,2.80e-09,33;CL:0000047,2.80e-09,33;CL:0000031,2.80e-09,33;CL:0000404,2.80e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.47e-13!73;UBERON:0005743!1.47e-13!73;UBERON:0000073!7.73e-13!75;UBERON:0001016!7.73e-13!75;UBERON:0001049!8.69e-10!52;UBERON:0005068!8.69e-10!52;UBERON:0006241!8.69e-10!52;UBERON:0007135!8.69e-10!52;UBERON:0000955!4.40e-09!50;UBERON:0006238!4.40e-09!50;UBERON:0002616!4.74e-09!49;UBERON:0000033!3.55e-08!63;UBERON:0002780!1.28e-07!39;UBERON:0001890!1.28e-07!39;UBERON:0006240!1.28e-07!39;UBERON:0003080!1.54e-07!40;UBERON:0002346!3.96e-07!71;UBERON:0003075!3.96e-07!71;UBERON:0007284!3.96e-07!71;UBERON:0000344!6.20e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-13,73;UBERON:0001016,7.73e-13,75;UBERON:0000073,1.61e-10,54;UBERON:0001049,8.69e-10,52;UBERON:0005068,8.69e-10,52;UBERON:0006241,8.69e-10,52;UBERON:0007135,8.69e-10,52;UBERON:0002346,7.79e-09,64;UBERON:0003075,7.79e-09,64;UBERON:0007284,7.79e-09,64;UBERON:0000955,1.87e-08,47;UBERON:0006238,1.87e-08,47;UBERON:0002616,2.01e-08,46;UBERON:0004121,1.15e-07,95;UBERON:0000924,1.15e-07,95;UBERON:0006601,1.15e-07,95;UBERON:0002780,1.28e-07,39;UBERON:0001890,1.28e-07,39;UBERON:0006240,1.28e-07,39;UBERON:0003080,1.54e-07,40;UBERON:0000344,6.20e-07,15
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9239621716,17.1452402731864,19.2159056096636,17.3975006836419,17.3572257023205,17.0141362289619,26.1822246049422,32.9309835936071,12.9649375897364,29.3052430246198,32.264405639134,26.2509104264464,32.4191156929105,20.4436911843842,26.7574504112319,24.8690375051945,37.4347859599788,20.0514820285585,12.0972602628303,21.4887562027161,21.0834223901771,19.1042380326579,15.3306571113798,17.9026695667481,16.0931897372825,18.3899037765552,14.4735736631086,19.183625490148,17.83239275727,14.8214492151156,16.4703818450182,15.490106504093,18.3496736425063,13.1503622496823,19.3127779435436,14.4439309141256,15.2775000891311,18.9325802151547,17.4544702169599,21.2455884150028,19.2931541171159,28.5896099300157,23.1548255472997,16.1113832777512,26.3531936182122,15.8104927756193,17.8121455140367,24.1726047164704,28.3509450097358,21.6154177547626,23.1102628581944,28.9945774581019,37.3634451303036,34.7151639858897,29.5369137954652,16.531256760644,27.0400979790097,22.2450645224517,16.2240111295179,15.0405591784393,24.389859928978,21.4792629999228,17.2365923925363,15.0901073108861,17.6982449118078,16.0062881012173,13.669641611436,18.0991602687568,12.5155072020444,16.7831021803423,13.1867488257058,17.2222736557245,18.8578088811978,15.9728225543404,20.2670761455223,14.0986024133359,15.1516102468682,12.7768057916432,14.2683818840763,12.8904158604543,14.9384525230448,23.0068331379673,16.0157274467635,15.3666992505879,13.9138554677694,15.6486209597826,14.8538090455479,23.232383748229,14.0358965067245,13.9666185131394,17.9811032144713,12.1325280515734,18.0856911783929
|phase1_expression=29.9478344085965,51.9973357382648,55.5099072055234,37.5055622020469,38.5689712058687,46.1667997757697,47.1897534002962,26.8576512758479,9.15126693985834,17.3207749478275,6.8487187290202,11.6467352133191,20.7152883216759,25.2644962990902,15.3230490435205,15.5905955890166,16.0899231969474,53.7862991935795,52.1034847701807,54.3218754301479,20.4954329264078,19.06386263057,22.9855814442263,46.0778177645011,46.3406747755683,57.997428375617,49.5376295582936,46.1108437947803,44.6555035722479,34.5281277771105,37.9159173220571,24.7661962649256,27.0628506537211,0,29.1740135948787,25.4339007398493,23.8878146826972,60.6870864568516,60.9441568728564,64.3934205087772,41.764435650202,54.6436387966757,50.49307671524,39.2798072083801,38.421856932196,33.405508893426,37.5547845287059,45.3492325271329,32.2938688619674,37.719400420411,34.2966732982138,38.8131923785423,31.8786951509699,12.3311564141929,13.4437519656986,18.7799388306241,20.9169411155292,23.2052441524849,51.793013980057,56.0730438028355,58.3124891225685,37.9505875917428,30.2360230677787,46.344835439992,48.4544517657817,51.8650483910653,49.7336183460552,57.6327457982332,41.7869137603165,52.9223278260227,47.323116304061,32.5642122220336,32.2468069789356,45.199104910318,55.3986822485406,44.122501757281,30.8324466798288,25.7928422932079,31.4893393175299,56.8429900117135,63.3094493728675,61.9886910962544,32.943593882163,28.7008931116157,32.0876320331301,31.2306300602088,29.4709379254143,37.6526880567107,18.3257387866305,17.986031305415,28.1168554040627,24.9522924324602,32.638624017972,18.8896117073236,17.5439632710871,12.5447528387254,21.487996280158,24.5419664512403,37.1493986582102,27.5604868118065,28.3095273751128,39.7812079984385,43.3168907501298,49.7746692207332,23.3810324292111,17.988550448732,30.331466700887,18.3836046347687,17.6077760880077,21.6725523034644,19.4303565978072,18.2679286987285,16.3737003051802,15.3737093363675,17.52071736322,21.3633205260448,15.3260879995312,13.158541479712,25.6537060065464,12.4560474459505,15.6797478106879,14.0613823409214,18.6391761218122,25.4719293400046,22.6202443358531,27.5893619625279,19.8893106679828,32.394747473644,31.8946269953392,22.4685959107234,17.8425235099264,22.1151659718641,23.9877561865342,21.7358138730781,30.7526305948149,26.6075671431123,19.654997223111,22.6420686510369,24.0086620511991,14.5204880561667,28.7566178947575,32.1862946206862,25.0286360429435,19.4409215008072,19.8666577521877,21.6512187281396,19.3962569838639,18.8853460639481,30.8262229893964,25.15110866232,24.2812551346249,21.4811817779023,21.409638190371,12.8853301613202,12.7584924572925,28.8599686886815,40.0261516768544,41.1756651383544,26.4272054437901,21.9553318887632,25.5633405379395,22.5077576826269,23.674473558521,18.495837784256,19.9004575624718,21.3931229170375,19.8522317035718,19.0327508058486,13.9875872426458,15.9242440156722,17.6730004809965,18.7135983904425,15.3685080703735,20.2651692328161,25.4450837762594,23.2564423977183,37.667741260153,21.1560453330835,21.7554015545939,25.3137972327878,17.0105048945163,16.1346819698674,14.8993289376063,16.9300807240178,18.9811624617805,14.987604879885,17.0907941984183,18.1050389557447,15.5971269695296,17.0775687644302,18.371734239349,22.7021051509979,27.6915135391499,18.7367560679955,19.1603150644237,19.5505274731502,19.5892012039302,15.2194729161991,16.6312092636797,12.251642282307,15.071877872772,19.8669433914099,23.1233049127976,13.1807633515714,12.3832166921318,11.4679677316275,13.3887680116412,14.2294524253926,15.2775511068852,17.5494643844994,17.0241988113787,15.3754391385326,11.5014565221884,26.0498663367952,17.1620720213008,25.7630455506054,23.8598559984143,16.4030797263545,22.5398892003258,28.9921860008842,22.6521317254416,20.5391553787978,19.7139808562342,19.9332446355761,23.5663204477154,15.6106918286239,19.0738524368491,16.6098517236581,14.1914744105164,24.7433605220764,17.6138681503213,27.7726192476502,48.2532108605671,50.0393229113213,16.2282210096282,12.6930903300177,25.8486449880345,23.7939723782172,23.2787622434879,14.895784705058,24.9251493338843,25.7689571235781,21.7577631710127,22.7020358054924,26.2902435417225,23.2122755246843,21.0501564870945,22.2114452012597,16.602086673754,24.4204200480573,20.4393722699907,27.0659717574228,19.5464351224291,22.2709666012923,18.5843193675948,27.1914312493579,26.9067965698628,25.4616857670462,34.8456233599312,24.9022469834581,17.0562673491026,23.9932261455154,17.1118741624666,28.1272714562876,26.3546521437497,24.7525303795648,29.6182457005796,31.330630361448,40.2305506564366,26.1491182738543,33.694644392032,34.6035506148017,28.9606276259733,40.1893732831271,13.1416156515678,22.8778636532926,16.5396298541221,12.5313552235525,10.6566521619298,10.3738230876428,15.0409153443952,13.7878355785851,19.8206968908299,22.4364615432717,21.7006018613273,22.289781740028,18.3342582096015,15.6345819313894,16.129918871081,17.1583629904892,13.4282959695146,18.8934460636938,18.1041965683795,15.2747298882418,28.4702394223022,19.7219883113043,18.6849239621716,17.1452402731864,19.2159056096636,17.3975006836419,17.3572257023205,17.0141362289619,26.1822246049422,32.9309835936071,12.9649375897364,29.3052430246198,32.264405639134,26.2509104264464,32.4191156929105,20.4436911843842,26.7574504112319,24.8690375051945,37.4347859599788,20.0514820285585,12.0972602628303,21.4887562027161,21.0834223901771,19.1042380326579,15.3306571113798,17.9026695667481,16.0931897372825,18.3899037765552,14.4735736631086,19.183625490148,17.83239275727,14.8214492151156,16.4703818450182,15.490106504093,18.3496736425063,13.1503622496823,19.3127779435436,14.4439309141256,15.2775000891311,18.9325802151547,17.4544702169599,21.2455884150028,19.2931541171159,28.5896099300157,23.1548255472997,16.1113832777512,26.3531936182122,15.8104927756193,17.8121455140367,24.1726047164704,28.3509450097358,21.6154177547626,23.1102628581944,28.9945774581019,37.3634451303036,34.7151639858897,29.5369137954652,16.531256760644,27.0400979790097,22.2450645224517,16.2240111295179,15.0405591784393,24.389859928978,21.4792629999228,17.2365923925363,15.0901073108861,17.6982449118078,16.0062881012173,13.669641611436,18.0991602687568,12.5155072020444,16.7831021803423,13.1867488257058,17.2222736557245,18.8578088811978,15.9728225543404,20.2670761455223,14.0986024133359,15.1516102468682,12.7768057916432,14.2683818840763,12.8904158604543,14.9384525230448,23.0068331379673,16.0157274467635,15.3666992505879,13.9138554677694,15.6486209597826,14.8538090455479,23.232383748229,14.0358965067245,13.9666185131394,17.9811032144713,12.1325280515734,18.0856911783929
|short_description=p1@Usf1
}}
}}

Latest revision as of 19:02, 26 September 2015

Short description:p1@Usf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000001284, ENSMUST00000159207, ENSMUST00000160335, ENSMUST00000161241, ENSMUST00000161297, uc007doj.1, uc007dok.1_5end
EntrezGene:Usf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Usf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I552.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I655.51
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I746.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I847.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.86
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.15
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.72
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A253.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A452.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A654.32
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D146.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D246.34
GP2+ M cell, pool1.CNhs13228.11845-124H958.00
GP2+ M cell, pool2.CNhs13231.11846-124I149.54
GP2+ M cell, pool3.CNhs13240.11847-124I246.11
Ileum epithelium, pool1.CNhs13199.10252-104B944.66
Ileum epithelium, pool2.CNhs13232.10253-104C134.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F529.17
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F625.43
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G860.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H160.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H364.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H254.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D938.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B737.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C245.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.29
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C337.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C351.79
Mouse Granule cells, donor2.CNhs12357.11731-123E356.07
Mouse Granule cells, donor3.CNhs12108.11636-122C758.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C637.95
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C746.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D251.87
Mouse Microglia, donor1.CNhs12629.11718-123C849.73
Mouse Microglia, donor2.CNhs12634.11736-123E857.63
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.32
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D245.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F255.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D644.12
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D861.99
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.65
Mouse Schwann, donor1.CNhs12507.11728-123D918.33
Mouse Schwann, donor2.CNhs12573.11746-123F917.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E337.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.56
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.33
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.38
accessory axillary lymph node, adult.CNhs10475.1063-29H917.61
adrenal gland, adult.CNhs10508.49-24D721.67
adrenal gland, embryo E14.CNhs11038.406-44C519.43
adrenal gland, embryo E16.CNhs11004.1254-43D618.27
adrenal gland, embryo E17.CNhs11043.1263-45I116.37
adrenal gland, embryo E18.CNhs11026.1262-18F515.37
adrenal gland, neonate N00.CNhs11191.1311-23C117.52
adrenal gland, neonate N25.CNhs11223.1377-27I321.36
amnion, adult pregnant day17.5.CNhs10488.583-22A815.33
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A615.68
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B225.47
cerebellum, neonate N30.CNhs11135.1395-42I222.62
colon, adult.CNhs10468.36-18H727.59
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C719.89
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D132.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.89
corpora quadrigemina, adult.CNhs10501.16-22A422.47
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F122.12
cortex, adult.CNhs10473.12-14D523.99
cortex, neonate N30.CNhs11107.1392-42F221.74
diencephalon, adult.CNhs10482.20-12F230.75
diencephalon, neonate N30.CNhs11201.1388-42B226.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.64
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C628.76
eyeball, embryo E14.CNhs10521.399-16E232.19
eyeball, embryo E15.CNhs10593.426-16C925.03
eyeball, embryo E17.CNhs11023.1261-18D419.44
eyeball, neonate N00.CNhs11207.633-15C619.87
eyeball, neonate N01.CNhs11140.1532-43E721.65
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A218.89
forelimb, embryo E11.CNhs10596.335-25E230.83
forelimb, embryo E12.CNhs10600.359-14H225.15
forelimb, embryo E13.CNhs10589.384-1E224.28
forelimb, embryo E14.CNhs10577.413-26A821.48
forelimb, embryo E15.CNhs11007.437-20E721.41
forelimb, embryo E17.CNhs10598.1517-43C412.89
forelimb, embryo E18.CNhs11008.1520-43B512.76
gonad, embryo E13.CNhs11044.1564-45I628.86
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.03
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D241.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.43
heart, embryo E11.CNhs10586.331-24E921.96
heart, embryo E12.CNhs11015.353-12F525.56
heart, embryo E13.CNhs11013.376-3I922.51
heart, embryo E14.CNhs10597.403-26D423.67
heart, embryo E15.CNhs11017.431-16C818.50
heart, embryo E16.CNhs11021.457-17C619.90
heart, embryo E17.CNhs11025.479-18E521.39
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E319.03
heart, neonate N03.CNhs11221.1349-25I213.99
heart, neonate N10.CNhs11118.749-24G115.92
heart, neonate N16.CNhs11209.782-15G117.67
heart, neonate N20.CNhs11127.821-26I618.71
heart, neonate N25.CNhs11196.1351-25D315.37
heart, neonate N30.CNhs11202.1390-42D220.27
hippocampus, adult.CNhs10478.13-16E825.45
hippocampus, neonate N00.CNhs11228.627-43G123.26
intestinal mucosa, adult.CNhs10506.860-29I337.67
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I521.76
intestine, embryo E13.CNhs11010.381-16D525.31
intestine, embryo E15.CNhs10602.976-16D817.01
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D314.90
intestine, embryo E18.CNhs10526.1289-20F716.93
intestine, neonate N00.CNhs11126.644-26D118.98
intestine, neonate N01.CNhs11192.1322-23E914.99
intestine, neonate N06.CNhs11102.688-20B817.09
intestine, neonate N07.CNhs11095.720-20F218.11
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E318.37
intestine, neonate N30.CNhs11131.1384-42G122.70
kidney, embryo E14.CNhs10606.411-4I927.69
kidney, embryo E15.CNhs10997.434-16F818.74
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I219.55
kidney, embryo E18.CNhs11001.1288-20C719.59
kidney, neonate N00.CNhs11214.646-21G715.22
kidney, neonate N10.CNhs11206.758-6D516.63
kidney, neonate N20.CNhs11113.832-19I112.25
kidney, neonate N25.CNhs11122.1353-25F315.07
kidney, neonate N30.CNhs11203.1385-42H119.87
liver, adult pregnant day01.CNhs10466.508-5B223.12
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H612.38
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D713.39
liver, embryo E16.CNhs10523.462-17F514.23
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F417.02
liver, neonate N03.CNhs11123.1345-25G215.38
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A325.76
liver, neonate N25.CNhs11198.1368-26H123.86
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B122.54
lung, embryo E12.CNhs10522.354-16G228.99
lung, embryo E14.CNhs10604.404-26F822.65
lung, embryo E15.CNhs11020.432-17C520.54
lung, embryo E16.CNhs10998.458-17B619.71
lung, embryo E17.CNhs10605.480-44A619.93
lung, embryo E18.CNhs10583.1287-20I623.57
lung, neonate N00.CNhs11224.640-42C615.61
lung, neonate N06.CNhs11212.683-20E519.07
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E614.19
lung, neonate N20.CNhs11109.822-18A424.74
lung, neonate N25.CNhs11119.1359-25C717.61
lung, neonate N30.CNhs11133.1394-42H227.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A148.25
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A150.04
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H212.69
medulla oblongata, adult.CNhs10477.17-12C225.85
medulla oblongata, neonate N30.CNhs11200.1396-42A323.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E225.77
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.70
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.29
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I720.44
ovary, embryo E18.CNhs11040.505-44H727.07
ovary, neonate N00.CNhs11217.1299-22I419.55
oviduct, adult pregnant day01.CNhs10500.988-6G622.27
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F427.19
pancreas, embryo E15.CNhs11042.1556-45F226.91
pancreas, embryo E16.CNhs11003.460-26E525.46
pancreas, embryo E17.CNhs10599.1558-45G334.85
pancreas, embryo E18.CNhs10580.1535-43I724.90
pancreas, neonate N00.CNhs11105.645-26G917.06
pancreas, neonate N01.CNhs11138.1531-43D723.99
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B628.13
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H524.75
pituitary gland, adult.CNhs10493.21-1G829.62
pituitary gland, embryo E12.CNhs11018.346-16E631.33
pituitary gland, embryo E13.CNhs11009.370-44C740.23
pituitary gland, embryo E14.CNhs11037.398-44A526.15
pituitary gland, embryo E15.CNhs10592.427-16B933.69
pituitary gland, embryo E16.CNhs11036.449-43F634.60
pituitary gland, embryo E17.CNhs11039.1265-44F528.96
pituitary gland, neonate N00.CNhs11190.1308-22E940.19
placenta, adult pregnant day10.CNhs10472.539-13I713.14
placenta, adult pregnant day17.CNhs10464.577-18G322.88
prostate, adult.CNhs10470.859-1F816.54
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H310.37
skin, neonate N06.CNhs11097.693-20I515.04
skin, neonate N10.CNhs11108.762-6C413.79
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G221.70
spleen, embryo E16.CNhs11035.461-43C122.29
spleen, embryo E18.CNhs11011.1271-21F218.33
spleen, neonate N10.CNhs11116.752-24D115.63
spleen, neonate N20.CNhs11112.824-19H116.13
spleen, neonate N25.CNhs11099.1354-25G317.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.10
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E328.47
stomach, embryo E15.CNhs10603.1252-16G819.72
stomach, embryo E16.CNhs11022.459-17D418.68
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B817.40
stomach, neonate N07.CNhs11210.718-18A917.36
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I126.18
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F529.31
testis, embryo E15.CNhs11034.443-27C532.26
testis, embryo E16.CNhs11033.470-26G526.25
testis, embryo E17.CNhs11029.486-18I532.42
testis, embryo E18.CNhs11027.503-18G520.44
testis, neonate N00.CNhs11189.1300-22B726.76
testis, neonate N07.CNhs11222.726-26I424.87
testis, neonate N10.CNhs11204.763-44D937.43
testis, neonate N20.CNhs11110.839-18H320.05
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B521.49
thymus, embryo E14.CNhs11041.402-44I421.08
thymus, embryo E15.CNhs11005.430-45I219.10
thymus, embryo E16.CNhs11002.456-26C515.33
thymus, embryo E17.CNhs10581.478-18C117.90
thymus, embryo E18.CNhs10595.1273-19G416.09
thymus, neonate N02.CNhs11181.1541-43F818.39
thymus, neonate N03.CNhs11137.2104-43C714.47
thymus, neonate N06.CNhs11197.681-26C419.18
thymus, neonate N07.CNhs11211.713-19D317.83
thymus, neonate N10.CNhs11194.748-24E414.82
thymus, neonate N20.CNhs11186.820-7A216.47
thymus, neonate N25.CNhs11125.1362-25G715.49
thymus, neonate N30.CNhs11132.1393-42G218.35
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.28
urinary bladder, adult.CNhs10481.879-12E418.93
uterus, adult pregnant day19.CNhs10497.590-15F517.45
uterus, adult.CNhs10509.92-27E521.25
vagina, adult.CNhs10502.89-27D519.29
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.99
whole body, embryo E11.CNhs11014.324-5I837.36
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H229.54
whole body, embryo E14.5.CNhs10578.420-27D216.53
whole body, embryo E14.CNhs10519.395-14B127.04
whole body, embryo E16.CNhs10514.453-14F222.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.65
whole body, embryo E17.5.CNhs10513.490-9F914.85
whole body, embryo E17.CNhs10517.475-3I523.23
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C617.98
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B418.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell9.16e-1670
somatic stem cell5.81e-1291
multi fate stem cell5.81e-1291
ectodermal cell6.36e-1244
neurectodermal cell6.36e-1244
neural cell9.77e-1243
CNS neuron (sensu Vertebrata)7.68e-1123
neuroblast (sensu Vertebrata)7.68e-1123
stem cell9.20e-1097
electrically responsive cell1.05e-0939
electrically active cell1.05e-0939
neuron2.80e-0933
neuronal stem cell2.80e-0933
neuroblast2.80e-0933
electrically signaling cell2.80e-0933

Uber anatomy
Ontology termp-valuen
central nervous system1.47e-1373
nervous system7.73e-1375
regional part of nervous system1.61e-1054
neural tube8.69e-1052
neural rod8.69e-1052
future spinal cord8.69e-1052
neural keel8.69e-1052
neurectoderm7.79e-0964
neural plate7.79e-0964
presumptive neural plate7.79e-0964
brain1.87e-0847
future brain1.87e-0847
regional part of brain2.01e-0846
ectoderm-derived structure1.15e-0795
ectoderm1.15e-0795
presumptive ectoderm1.15e-0795
regional part of forebrain1.28e-0739
forebrain1.28e-0739
future forebrain1.28e-0739
anterior neural tube1.54e-0740
mucosa6.20e-0715
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