FFCP PHASE1:Mm9::chr1:135996014..135996060,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:135996014..135996060,+ to FFCP PHASE1:Mm9::chr1:135996014..135996060,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:135996014..135996060,+ | |||
|description=CAGE_peak_at_chr1:135996014..135996060,+ | |||
|id=chr1:135996014..135996060,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.59e-13!66;CL:0000066!1.06e-08!25;CL:0000144!1.29e-08!121;CL:0000012!1.29e-08!121;CL:0002371!2.46e-08!118;CL:0002320!1.43e-07!46;CL:0000134!1.43e-07!46;CL:0000548!2.29e-07!115;CL:0000004!2.29e-07!115;CL:0000255!2.29e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.32e-12,25;CL:0000723,2.97e-11,91;CL:0000048,2.97e-11,91;CL:0000034,4.03e-11,97;CL:0002320,9.43e-10,46;CL:0000134,9.43e-10,46;CL:0002031,1.06e-09,25;CL:0000223,1.16e-08,20;CL:0002563,4.31e-08,9;CL:0002251,4.31e-08,9;CL:0000075,4.76e-08,7;CL:0000219,6.28e-08,54;CL:0000239,3.30e-07,6;CL:0000677,3.30e-07,6;CL:0000584,3.30e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.41e-08!32;UBERON:0002384!1.43e-07!46;UBERON:0000485!4.96e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.55e-10,32;UBERON:0000485,6.53e-10,11;UBERON:0002384,9.43e-10,46;UBERON:0000490,1.81e-08,66;UBERON:0003350,4.31e-08,9;UBERON:0004808,4.31e-08,9;UBERON:0001277,4.31e-08,9;UBERON:0007524,6.43e-08,11;UBERON:0003077,6.43e-08,11;UBERON:0007285,6.43e-08,11;UBERON:0000383,6.43e-07,10 | |||
|phase1_expression=3.52327463630547,2.79180326111489,5.0049916332849,5.74682001482977,8.5152274090879,2.18243053485457,1.86890112476421,5.16493293766305,3.51971805379167,3.04283884218592,0.68487187290202,0.0797721589953364,3.42401459862411,1.66098764596095,0.666219523631325,2.83465374345756,2.79824751251259,4.73193248037357,3.70208970735495,2.97072756258621,0.765389611359628,0,0,0.799962113967033,0.68822784320151,4.01962374880514,1.29228598847722,1.07735616342945,0,0.252030129759931,0.221730510655305,11.4305521222734,9.22597181376855,0,5.77703239502549,0.831173226792462,4.49172583777212,3.76678467663217,3.1253413780952,1.0470474879476,13.5293242247133,9.56263678941824,2.42755176515577,1.00717454380462,3.04130793658544,1.10128051297009,0,0.436050312760893,0.659058548203415,1.55543919259427,0.839918529752175,0,11.5769998179838,2.90144856804538,1.34437519656986,1.80081605225163,0.573066879877513,5.67239301505187,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,1.4209602298922,1.19840044207362,0.384218305321555,0.103689612308478,0,0.210324961351382,0.856952953211411,0,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0.151143120213571,41.7404863730416,5.16254326188832,4.0798280022465,2.69851595818909,0.649776417447669,1.34408066129201,0.280888840263504,0.852151612890289,1.03914401841148,0.70667914902068,2.67602497575693,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,0.79928715803342,0.258937883647172,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,0,0.940709657085638,0.376999773989026,0.988779870937496,0.722996784599558,1.76922110389975,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,0.510914110417183,0.599075622529601,0.599902730993408,0.508280908292259,0.149790639404823,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.611036183101898,0.870848794270651,0,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.136072998302656,0.384341160854549,0.0937017245597288,1.29351685369508,0,0,1.23165786914764,0.43839146485515,1.11218899690239,0,0.411564272815887,0.398068533636986,0,0.51469581422943,0.568326998791185,0.414251545071004,0.703578179943289,0.900310307305074,0.473489471170421,0.590292695242212,0.154267112887378,0.232533944750408,0,0.817357396570186,0.16455984991348,0.32833492815819,0.972825714550269,1.46199987425332,1.53685080703735,0.536825675041487,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0,2.27601481143698,0.571242563048644,0,0.203651327845314,0.387904974335251,0.841629838683823,0.189709611372772,0.295220295959204,0,0.616985819609003,0.296452627087149,0.83422552858047,0.589676985339609,0.899448449539415,1.01430060694251,1.68824011826692,1.01850340712568,0.863088412352432,0.972811360650212,0.823684239564244,0,0,0.312037673114561,0.757736633841335,0,0.964887042726734,2.40179147216586,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.837531287209079,0.714130922658041,0.390267295715598,0.788175720530955,0.664394068946325,1.2756381492599,7.04612253277673,1.03610989119537,1.88043776155965,1.50791283939272,0,0,0.551873492609465,0.160550589987792,0.703270119553219,0.327869890753351,2.01976741763498,1.89304931649754,1.56175497718655,0.861693590931196,0.955875191810208,1.78238939265915,0.566153061577665,2.02405350837447,1.16902343164525,0.395287777946524,0.963963949265421,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,2.65490276679926,0.728341908464944,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,3.06395645178409,0,0.388076051348264,0.857348140126369,0.354680467284547,0.535106452806212,0.164549020602121,3.65357938937519,0.23467170806371,0.21183207086382,0,1.15420377059036,1.13025098687134,0.663442174209714,0.477489376012546,0.328281799490123,0,0.18542530201051,1.02522528478712,0.206386867963223,0.740778109478847,1.50694765603753,1.36694227721025,1.14389086603261,0.169978429993855,1.39951452323658,1.24379976423981,0,0,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.674321731924103,0.41326727862668,1.57053565190418,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0,0.258319646955462,0.337912250981556,0.821500670520278,0.2604087696879,0.524296722128554,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0.596044064343795,0,0.295379054349154,0.504832249740738,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0.467507608726276,0.680191150845634,0.443971906748129,0.448569283047378,0.335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| |phase1_expression=3.52327463630547,2.79180326111489,5.0049916332849,5.74682001482977,8.5152274090879,2.18243053485457,1.86890112476421,5.16493293766305,3.51971805379167,3.04283884218592,0.68487187290202,0.0797721589953364,3.42401459862411,1.66098764596095,0.666219523631325,2.83465374345756,2.79824751251259,4.73193248037357,3.70208970735495,2.97072756258621,0.765389611359628,0,0,0.799962113967033,0.68822784320151,4.01962374880514,1.29228598847722,1.07735616342945,0,0.252030129759931,0.221730510655305,11.4305521222734,9.22597181376855,0,5.77703239502549,0.831173226792462,4.49172583777212,3.76678467663217,3.1253413780952,1.0470474879476,13.5293242247133,9.56263678941824,2.42755176515577,1.00717454380462,3.04130793658544,1.10128051297009,0,0.436050312760893,0.659058548203415,1.55543919259427,0.839918529752175,0,11.5769998179838,2.90144856804538,1.34437519656986,1.80081605225163,0.573066879877513,5.67239301505187,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,1.4209602298922,1.19840044207362,0.384218305321555,0.103689612308478,0,0.210324961351382,0.856952953211411,0,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0.151143120213571,41.7404863730416,5.16254326188832,4.0798280022465,2.69851595818909,0.649776417447669,1.34408066129201,0.280888840263504,0.852151612890289,1.03914401841148,0.70667914902068,2.67602497575693,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,0.79928715803342,0.258937883647172,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,0,0.940709657085638,0.376999773989026,0.988779870937496,0.722996784599558,1.76922110389975,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,0.510914110417183,0.599075622529601,0.599902730993408,0.508280908292259,0.149790639404823,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.611036183101898,0.870848794270651,0,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.136072998302656,0.384341160854549,0.0937017245597288,1.29351685369508,0,0,1.23165786914764,0.43839146485515,1.11218899690239,0,0.411564272815887,0.398068533636986,0,0.51469581422943,0.568326998791185,0.414251545071004,0.703578179943289,0.900310307305074,0.473489471170421,0.590292695242212,0.154267112887378,0.232533944750408,0,0.817357396570186,0.16455984991348,0.32833492815819,0.972825714550269,1.46199987425332,1.53685080703735,0.536825675041487,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0,2.27601481143698,0.571242563048644,0,0.203651327845314,0.387904974335251,0.841629838683823,0.189709611372772,0.295220295959204,0,0.616985819609003,0.296452627087149,0.83422552858047,0.589676985339609,0.899448449539415,1.01430060694251,1.68824011826692,1.01850340712568,0.863088412352432,0.972811360650212,0.823684239564244,0,0,0.312037673114561,0.757736633841335,0,0.964887042726734,2.40179147216586,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.837531287209079,0.714130922658041,0.390267295715598,0.788175720530955,0.664394068946325,1.2756381492599,7.04612253277673,1.03610989119537,1.88043776155965,1.50791283939272,0,0,0.551873492609465,0.160550589987792,0.703270119553219,0.327869890753351,2.01976741763498,1.89304931649754,1.56175497718655,0.861693590931196,0.955875191810208,1.78238939265915,0.566153061577665,2.02405350837447,1.16902343164525,0.395287777946524,0.963963949265421,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,2.65490276679926,0.728341908464944,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,3.06395645178409,0,0.388076051348264,0.857348140126369,0.354680467284547,0.535106452806212,0.164549020602121,3.65357938937519,0.23467170806371,0.21183207086382,0,1.15420377059036,1.13025098687134,0.663442174209714,0.477489376012546,0.328281799490123,0,0.18542530201051,1.02522528478712,0.206386867963223,0.740778109478847,1.50694765603753,1.36694227721025,1.14389086603261,0.169978429993855,1.39951452323658,1.24379976423981,0,0,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.674321731924103,0.41326727862668,1.57053565190418,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0,0.258319646955462,0.337912250981556,0.821500670520278,0.2604087696879,0.524296722128554,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0.596044064343795,0,0.295379054349154,0.504832249740738,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0.467507608726276,0.680191150845634,0.443971906748129,0.448569283047378,0.335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| ||
|short_description=p@chr1:135996014..135996060,+ | |||
}} | }} |
Latest revision as of 20:03, 4 August 2015
Short description: | p@chr1:135996014..135996060, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135996014..135996060, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.32e-12 | 25 |
somatic stem cell | 2.97e-11 | 91 |
multi fate stem cell | 2.97e-11 | 91 |
stem cell | 4.03e-11 | 97 |
connective tissue cell | 9.43e-10 | 46 |
mesenchymal cell | 9.43e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 1.06e-09 | 25 |
endodermal cell | 1.16e-08 | 20 |
intestinal epithelial cell | 4.31e-08 | 9 |
epithelial cell of alimentary canal | 4.31e-08 | 9 |
columnar/cuboidal epithelial cell | 4.76e-08 | 7 |
motile cell | 6.28e-08 | 54 |
brush border epithelial cell | 3.30e-07 | 6 |
gut absorptive cell | 3.30e-07 | 6 |
enterocyte | 3.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.55e-10 | 32 |
simple columnar epithelium | 6.53e-10 | 11 |
connective tissue | 9.43e-10 | 46 |
unilaminar epithelium | 1.81e-08 | 66 |
epithelium of mucosa | 4.31e-08 | 9 |
gastrointestinal system epithelium | 4.31e-08 | 9 |
intestinal epithelium | 4.31e-08 | 9 |
dense mesenchyme tissue | 6.43e-08 | 11 |
paraxial mesoderm | 6.43e-08 | 11 |
presumptive paraxial mesoderm | 6.43e-08 | 11 |
musculature of body | 6.43e-07 | 10 |