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FFCP PHASE1:Mm9::chr1:134439434..134439455,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:134439434..134439455,-
|DHSsupport=NA
|short_description=p1@Cntn2
|DPIdataset=NA
|description=CAGE_peak_1_at_Cntn2_5end
|association_with_transcript=60bp_to_ENSMUST00000086522_5end
|EntrezGene=21367
|EntrezGene=21367
|HGNC=
|HGNC=
|MCL_coexpression_id=2283
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=60bp_to_ENSMUST00000086522_5end
|cluster_id=chr1:134439434..134439455,-
|description=CAGE_peak_1_at_Cntn2_5end
|id=chr1:134439434..134439455,-
|ontology_enrichment_celltype=CL:0000117!1.73e-16!23;CL:0000337!1.73e-16!23;CL:0000540!2.32e-16!33;CL:0000047!2.32e-16!33;CL:0000031!2.32e-16!33;CL:0000404!2.32e-16!33;CL:0000393!1.60e-14!39;CL:0000211!1.60e-14!39;CL:0000221!4.35e-14!44;CL:0000133!4.35e-14!44;CL:0002319!5.47e-14!43;CL:0000055!3.25e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-20,23;CL:0000337,1.59e-20,23;CL:0000540,5.90e-17,33;CL:0000047,5.90e-17,33;CL:0000031,5.90e-17,33;CL:0000404,5.90e-17,33;CL:0000393,1.68e-14,39;CL:0000211,1.68e-14,39;CL:0000221,8.80e-13,44;CL:0000133,8.80e-13,44;CL:0002319,1.24e-12,43;CL:0002609,4.65e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.67e-30!75;UBERON:0001016!1.67e-30!75;UBERON:0001017!2.14e-30!73;UBERON:0005743!2.14e-30!73;UBERON:0004121!2.18e-27!102;UBERON:0000924!2.18e-27!102;UBERON:0006601!2.18e-27!102;UBERON:0000033!4.28e-26!63;UBERON:0001049!5.32e-25!52;UBERON:0005068!5.32e-25!52;UBERON:0006241!5.32e-25!52;UBERON:0007135!5.32e-25!52;UBERON:0002346!1.52e-24!71;UBERON:0003075!1.52e-24!71;UBERON:0007284!1.52e-24!71;UBERON:0000955!5.19e-24!50;UBERON:0006238!5.19e-24!50;UBERON:0002616!2.07e-23!49;UBERON:0003056!1.01e-21!49;UBERON:0002020!5.54e-20!34;UBERON:0003080!3.38e-19!40;UBERON:0002780!1.74e-18!39;UBERON:0001890!1.74e-18!39;UBERON:0006240!1.74e-18!39;UBERON:0002791!5.46e-17!29;UBERON:0003528!5.46e-17!29;UBERON:0001893!5.46e-17!29;UBERON:0007811!7.44e-15!86;UBERON:0000153!1.25e-12!94;UBERON:0000956!4.09e-12!21;UBERON:0001869!4.09e-12!21;UBERON:0000203!4.09e-12!21;UBERON:0002619!3.29e-09!17;UBERON:0000025!5.75e-08!114;UBERON:0004111!2.06e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.27e-32,73;UBERON:0002346,4.26e-32,64;UBERON:0003075,4.26e-32,64;UBERON:0007284,4.26e-32,64;UBERON:0001016,9.39e-32,75;UBERON:0000073,7.25e-31,54;UBERON:0004121,1.91e-29,95;UBERON:0000924,1.91e-29,95;UBERON:0006601,1.91e-29,95;UBERON:0001049,7.59e-29,52;UBERON:0005068,7.59e-29,52;UBERON:0006241,7.59e-29,52;UBERON:0007135,7.59e-29,52;UBERON:0010371,3.64e-27,73;UBERON:0003056,3.44e-25,49;UBERON:0000955,1.23e-24,47;UBERON:0006238,1.23e-24,47;UBERON:0010314,1.25e-24,92;UBERON:0002616,6.64e-24,46;UBERON:0002020,1.61e-23,34;UBERON:0003080,6.11e-22,40;UBERON:0002780,4.70e-21,39;UBERON:0001890,4.70e-21,39;UBERON:0006240,4.70e-21,39;UBERON:0003528,9.75e-20,29;UBERON:0002791,9.75e-20,29;UBERON:0001893,9.75e-20,29;UBERON:0000956,1.33e-13,21;UBERON:0001869,1.33e-13,21;UBERON:0000203,1.33e-13,21;UBERON:0002619,5.33e-10,17;UBERON:0000025,1.75e-08,114;UBERON:0002021,6.56e-08,10;UBERON:0000411,6.56e-08,10;UBERON:0001950,6.56e-08,10;UBERON:0004111,1.40e-07,122;UBERON:0002420,2.29e-07,8;UBERON:0007245,2.29e-07,8;UBERON:0010009,2.29e-07,8;UBERON:0010011,2.29e-07,8;UBERON:0000454,2.29e-07,8;UBERON:0003076,2.52e-07,12;UBERON:0003057,2.52e-07,12
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,5.15760191889762,5.67239301505187,79.5103691178219,62.9499265333719,99.5115303504701,0,0,0,0,0.7104801149461,1.49800055259202,1.53687322128622,268.659785491266,369.106235398842,322.848815674371,34.5637691128602,35.1180980113066,85.253596253608,72.6508670318232,151.671099790653,200.410903418887,124.622841971143,150.227189524606,34.1585485221202,25.7995154958795,35.4221091978597,150.758819460746,75.4101897442451,102.222027762686,40.6587447953661,30.1827963294098,36.3478919359336,0.227178579999552,2.19157524309678,0,0,0,0,0,0,3.37066608316204,0,0,0,1.12674735821344,0,0,0,0,0,0,1.1418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,131.458577858185,117.499602522348,0,0,0,0,102.606587992304,107.055141059559,10.5549655774806,47.1063907721069,27.3615539343454,111.789967973043,64.247540174832,0,0,0,1.68353484709179,7.026503919986,20.4612872945791,23.0479526150847,10.2479276128286,2.24520447199382,1.92170580427275,1.87403449119458,2.58703370739016,0.215567992932842,0.189106080167819,0,0.43839146485515,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,1.63471479314037,1.6455984991348,2.13417703302824,4.2155780963845,6.87139940899062,9.66020507280623,7.91817870686193,53.6239368838525,111.548599819144,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0,0.491589944147214,0.172684981865896,0,0,0,0,0,145.619385118927,116.50841647265,0,0.252470927204373,2.83957397474631,0.390438744296638,2.36965737506079,0.238968797952552,0.445597348164788,0.849229592366497,2.02405350837447,1.75353514746787,1.97643888973262,32.7747742750243,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,3.24109969256358,2.58717367565509,1.50035924522115,0.886701168211368,7.49149033928696,7.56925494769756,6.08929898229199,0,0,0.441056796109924,0.49465875882444,0.322928853391811,0,0.238744688006273,0.328281799490123,0,160.763736843112,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0.680191150845634,0,0,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,16.3778034358949,14.2700823317225,20.6242384838183,23.3720327987415,26.718218271055,45.323633843382,27.675922509504,38.2773022740587,45.7673833074047,33.1366599521165,10.4825221060018,34.7151639858897,19.4636310559713,14.1001895899611,8.59413966774727,5.51530525350042,13.1125569402953,9.88968274746692,12.194929964489,12.1294661646623,11.1530891951705,8.67681170375951,7.95952813494,9.98792377515961,6.31790158511746,8.09699275181225,8.92309309775387,6.17309505483856,6.1812885120496,10.5983222496766,10.2860775715625,6.74408063405482,9.29901140794552,8.86613141457204,9.2227192807024,9.56145069175945,7.86590283352922,9.47050961176234,5.56796866768033,12.906272248128,9.72807148618228,5.71325997778268,6.13846564754534,8.36658942404216,7.71626443924566,34.4738597554365,7.25187986180766,7.30561583764214,3.06061331310149,0.882365676478062,1.39120701372253
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,5.15760191889762,5.67239301505187,79.5103691178219,62.9499265333719,99.5115303504701,0,0,0,0,0.7104801149461,1.49800055259202,1.53687322128622,268.659785491266,369.106235398842,322.848815674371,34.5637691128602,35.1180980113066,85.253596253608,72.6508670318232,151.671099790653,200.410903418887,124.622841971143,150.227189524606,34.1585485221202,25.7995154958795,35.4221091978597,150.758819460746,75.4101897442451,102.222027762686,40.6587447953661,30.1827963294098,36.3478919359336,0.227178579999552,2.19157524309678,0,0,0,0,0,0,3.37066608316204,0,0,0,1.12674735821344,0,0,0,0,0,0,1.1418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,131.458577858185,117.499602522348,0,0,0,0,102.606587992304,107.055141059559,10.5549655774806,47.1063907721069,27.3615539343454,111.789967973043,64.247540174832,0,0,0,1.68353484709179,7.026503919986,20.4612872945791,23.0479526150847,10.2479276128286,2.24520447199382,1.92170580427275,1.87403449119458,2.58703370739016,0.215567992932842,0.189106080167819,0,0.43839146485515,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,1.63471479314037,1.6455984991348,2.13417703302824,4.2155780963845,6.87139940899062,9.66020507280623,7.91817870686193,53.6239368838525,111.548599819144,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0,0.491589944147214,0.172684981865896,0,0,0,0,0,145.619385118927,116.50841647265,0,0.252470927204373,2.83957397474631,0.390438744296638,2.36965737506079,0.238968797952552,0.445597348164788,0.849229592366497,2.02405350837447,1.75353514746787,1.97643888973262,32.7747742750243,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,3.24109969256358,2.58717367565509,1.50035924522115,0.886701168211368,7.49149033928696,7.56925494769756,6.08929898229199,0,0,0.441056796109924,0.49465875882444,0.322928853391811,0,0.238744688006273,0.328281799490123,0,160.763736843112,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0.680191150845634,0,0,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,16.3778034358949,14.2700823317225,20.6242384838183,23.3720327987415,26.718218271055,45.323633843382,27.675922509504,38.2773022740587,45.7673833074047,33.1366599521165,10.4825221060018,34.7151639858897,19.4636310559713,14.1001895899611,8.59413966774727,5.51530525350042,13.1125569402953,9.88968274746692,12.194929964489,12.1294661646623,11.1530891951705,8.67681170375951,7.95952813494,9.98792377515961,6.31790158511746,8.09699275181225,8.92309309775387,6.17309505483856,6.1812885120496,10.5983222496766,10.2860775715625,6.74408063405482,9.29901140794552,8.86613141457204,9.2227192807024,9.56145069175945,7.86590283352922,9.47050961176234,5.56796866768033,12.906272248128,9.72807148618228,5.71325997778268,6.13846564754534,8.36658942404216,7.71626443924566,34.4738597554365,7.25187986180766,7.30561583764214,3.06061331310149,0.882365676478062,1.39120701372253
|short_description=p1@Cntn2
}}
}}

Latest revision as of 09:09, 26 September 2015

Short description:p1@Cntn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cntn2_5end
Coexpression cluster:MCL_coexpression_mm9:2283
Association with transcript: 60bp_to_ENSMUST00000086522_5end
EntrezGene:Cntn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cntn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C379.51
Mouse Granule cells, donor2.CNhs12357.11731-123E362.95
Mouse Granule cells, donor3.CNhs12108.11636-122C799.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5268.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5369.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9322.85
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.12
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D285.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F272.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6151.67
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3200.41
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3124.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7150.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4150.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E575.41
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6102.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.35
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2131.46
cerebellum, neonate N30.CNhs11135.1395-42I2117.50
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4102.61
corpus striatum, adult.CNhs10487.19-21D8107.06
corpus striatum, neonate N00.CNhs11226.630-43F110.55
cortex, adult.CNhs10473.12-14D547.11
cortex, neonate N30.CNhs11107.1392-42F227.36
diencephalon, adult.CNhs10482.20-12F2111.79
diencephalon, neonate N30.CNhs11201.1388-42B264.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E220.46
eyeball, embryo E15.CNhs10593.426-16C923.05
eyeball, embryo E17.CNhs11023.1261-18D410.25
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G14.22
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D27.92
hippocampus, adult.CNhs10478.13-16E853.62
hippocampus, neonate N00.CNhs11228.627-43G1111.55
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2145.62
medulla oblongata, neonate N30.CNhs11200.1396-42A3116.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C9160.76
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A545.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A845.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I810.48
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H219.46
whole body, embryo E14.5.CNhs10578.420-27D214.10
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I534.47
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.27e-3273
neurectoderm4.26e-3264
neural plate4.26e-3264
presumptive neural plate4.26e-3264
nervous system9.39e-3275
regional part of nervous system7.25e-3154
ectoderm-derived structure1.91e-2995
ectoderm1.91e-2995
presumptive ectoderm1.91e-2995
neural tube7.59e-2952
neural rod7.59e-2952
future spinal cord7.59e-2952
neural keel7.59e-2952
ecto-epithelium3.64e-2773
pre-chordal neural plate3.44e-2549
brain1.23e-2447
future brain1.23e-2447
structure with developmental contribution from neural crest1.25e-2492
regional part of brain6.64e-2446
gray matter1.61e-2334
anterior neural tube6.11e-2240
regional part of forebrain4.70e-2139
forebrain4.70e-2139
future forebrain4.70e-2139
brain grey matter9.75e-2029
regional part of telencephalon9.75e-2029
telencephalon9.75e-2029
cerebral cortex1.33e-1321
cerebral hemisphere1.33e-1321
pallium1.33e-1321
regional part of cerebral cortex5.33e-1017
tube1.75e-08114
occipital lobe6.56e-0810
visual cortex6.56e-0810
neocortex6.56e-0810
anatomical conduit1.40e-07122
basal ganglion2.29e-078
nuclear complex of neuraxis2.29e-078
aggregate regional part of brain2.29e-078
collection of basal ganglia2.29e-078
cerebral subcortex2.29e-078
posterior neural tube2.52e-0712
chordal neural plate2.52e-0712
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