FFCP PHASE1:Mm9::chr1:132748312..132748340,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:132748312..132748340,+ to FFCP PHASE1:Mm9::chr1:132748312..132748340,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:132748312..132748340,+ | |||
|description=CAGE_peak_at_chr1:132748312..132748340,+ | |||
|id=chr1:132748312..132748340,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.59e-13!25;CL:0002563!1.43e-12!9;CL:0002251!1.43e-12!9;CL:0000223!1.11e-11!20;CL:0000239!1.87e-09!6;CL:0000677!1.87e-09!6;CL:0000212!1.87e-09!6;CL:0000584!1.87e-09!6;CL:0002076!4.41e-08!15;CL:0000075!5.97e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.73e-15,6;CL:0000677,8.73e-15,6;CL:0000584,8.73e-15,6;CL:0000066,8.64e-14,25;CL:0000223,9.84e-13,20;CL:0002563,1.11e-12,9;CL:0002251,1.11e-12,9;CL:0000075,1.40e-12,7;CL:0000182,6.34e-08,5;CL:0002076,3.22e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.45e-21!15;UBERON:0000160!5.99e-20!43;UBERON:0001242!2.23e-18!13;UBERON:0000060!2.23e-18!13;UBERON:0001262!2.23e-18!13;UBERON:0004786!2.23e-18!13;UBERON:0004119!1.06e-15!130;UBERON:0000925!1.06e-15!130;UBERON:0006595!1.06e-15!130;UBERON:0001007!2.88e-15!128;UBERON:0001555!2.88e-15!128;UBERON:0007026!2.88e-15!128;UBERON:0005409!1.07e-14!59;UBERON:0004921!1.32e-13!126;UBERON:0004185!1.32e-13!126;UBERON:0004923!4.52e-13!24;UBERON:0003350!1.43e-12!9;UBERON:0004808!1.43e-12!9;UBERON:0001277!1.43e-12!9;UBERON:0000485!6.82e-10!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.42e-36,31;UBERON:0000344,1.81e-26,15;UBERON:0005409,2.72e-24,47;UBERON:0001242,6.83e-22,13;UBERON:0001262,6.83e-22,13;UBERON:0004786,6.83e-22,13;UBERON:0001007,2.18e-16,116;UBERON:0001555,2.18e-16,116;UBERON:0007026,2.18e-16,116;UBERON:0004119,5.36e-16,118;UBERON:0000925,5.36e-16,118;UBERON:0006595,5.36e-16,118;UBERON:0004923,1.86e-15,24;UBERON:0004921,4.27e-14,114;UBERON:0003350,1.11e-12,9;UBERON:0004808,1.11e-12,9;UBERON:0001277,1.11e-12,9;UBERON:0002108,4.95e-11,4;UBERON:0000485,3.39e-10,11;UBERON:0000331,1.41e-08,3;UBERON:0002116,1.41e-08,3;UBERON:0001204,1.41e-08,3;UBERON:0001168,1.41e-08,3 | |||
|phase1_expression=0,2.44282785347553,2.72999543633722,26.9193148063079,15.5277676283368,1.51091344720701,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,9.27956052201759,4.81759490241057,2.29692785646008,0.86152399231815,3.23206849028834,13.4916627814025,6.80481350351813,3.54768817048488,0,0,0,0.866554859253824,1.49611180822643,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,2.719885334831,5.39703191637817,3.24888208723835,2.24013443548668,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0,0,5.59501010623394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,18.6483650302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.9544417878937,4.7601101999438,0,0,0,0.201683524623343,0.22237804384487,0,10.4396393539793,0.494096864172033,1.50801125280162,1.79060824837036,1.9496408711912,22.4704852163555,23.1267713365923,13.7407478545513,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,2.66807364378434,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0,0.345369963731791,0,0,0,5.4094070032094,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,9.0730481304255,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.93841237725591,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,2.72999543633722,26.9193148063079,15.5277676283368,1.51091344720701,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,9.27956052201759,4.81759490241057,2.29692785646008,0.86152399231815,3.23206849028834,13.4916627814025,6.80481350351813,3.54768817048488,0,0,0,0.866554859253824,1.49611180822643,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,2.719885334831,5.39703191637817,3.24888208723835,2.24013443548668,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0,0,5.59501010623394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,18.6483650302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.9544417878937,4.7601101999438,0,0,0,0.201683524623343,0.22237804384487,0,10.4396393539793,0.494096864172033,1.50801125280162,1.79060824837036,1.9496408711912,22.4704852163555,23.1267713365923,13.7407478545513,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,2.66807364378434,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0,0.345369963731791,0,0,0,5.4094070032094,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,9.0730481304255,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.93841237725591,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:132748312..132748340,+ | |||
}} | }} |
Latest revision as of 17:57, 4 August 2015
Short description: | p@chr1:132748312..132748340, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132748312..132748340, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.73e-15 | 6 |
gut absorptive cell | 8.73e-15 | 6 |
enterocyte | 8.73e-15 | 6 |
epithelial cell | 8.64e-14 | 25 |
endodermal cell | 9.84e-13 | 20 |
intestinal epithelial cell | 1.11e-12 | 9 |
epithelial cell of alimentary canal | 1.11e-12 | 9 |
columnar/cuboidal epithelial cell | 1.40e-12 | 7 |
hepatocyte | 6.34e-08 | 5 |
endo-epithelial cell | 3.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.42e-36 | 31 |
mucosa | 1.81e-26 | 15 |
gastrointestinal system | 2.72e-24 | 47 |
intestinal mucosa | 6.83e-22 | 13 |
wall of intestine | 6.83e-22 | 13 |
gastrointestinal system mucosa | 6.83e-22 | 13 |
digestive system | 2.18e-16 | 116 |
digestive tract | 2.18e-16 | 116 |
primitive gut | 2.18e-16 | 116 |
endoderm-derived structure | 5.36e-16 | 118 |
endoderm | 5.36e-16 | 118 |
presumptive endoderm | 5.36e-16 | 118 |
organ component layer | 1.86e-15 | 24 |
subdivision of digestive tract | 4.27e-14 | 114 |
epithelium of mucosa | 1.11e-12 | 9 |
gastrointestinal system epithelium | 1.11e-12 | 9 |
intestinal epithelium | 1.11e-12 | 9 |
small intestine | 4.95e-11 | 4 |
simple columnar epithelium | 3.39e-10 | 11 |
ileal mucosa | 1.41e-08 | 3 |
ileum | 1.41e-08 | 3 |
mucosa of small intestine | 1.41e-08 | 3 |
wall of small intestine | 1.41e-08 | 3 |