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FFCP PHASE1:Mm9::chr19:7557702..7557719,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:7557702..7557719,-
|DHSsupport=NA
|short_description=p2@Rtn3
|DPIdataset=NA
|description=CAGE_peak_2_at_Rtn3_5end
|association_with_transcript=51bp_to_ENSMUST00000025667,NM_053076_5end
|EntrezGene=20168
|EntrezGene=20168
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9ES97
|UniProt=Q9ES97
|association_with_transcript=51bp_to_ENSMUST00000025667,NM_053076_5end
|cluster_id=chr19:7557702..7557719,-
|description=CAGE_peak_2_at_Rtn3_5end
|id=chr19:7557702..7557719,-
|ontology_enrichment_celltype=CL:0000221!1.24e-13!44;CL:0000133!1.24e-13!44;CL:0002319!1.33e-13!43;CL:0000055!2.01e-13!50;CL:0000117!3.84e-13!23;CL:0000337!3.84e-13!23;CL:0000393!4.65e-12!39;CL:0000211!4.65e-12!39;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33
|ontology_enrichment_celltype_v019_2=CL:0000221,1.24e-13,44;CL:0000133,1.24e-13,44;CL:0002319,1.33e-13,43;CL:0000117,3.84e-13,23;CL:0000337,3.84e-13,23;CL:0000393,4.65e-12,39;CL:0000211,4.65e-12,39;CL:0000540,1.56e-11,33;CL:0000047,1.56e-11,33;CL:0000031,1.56e-11,33;CL:0000404,1.56e-11,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.62e-28!75;UBERON:0001016!4.62e-28!75;UBERON:0001017!6.74e-28!73;UBERON:0005743!6.74e-28!73;UBERON:0004121!2.17e-27!102;UBERON:0000924!2.17e-27!102;UBERON:0006601!2.17e-27!102;UBERON:0001049!6.28e-23!52;UBERON:0005068!6.28e-23!52;UBERON:0006241!6.28e-23!52;UBERON:0007135!6.28e-23!52;UBERON:0000955!6.12e-22!50;UBERON:0006238!6.12e-22!50;UBERON:0000033!7.11e-22!63;UBERON:0002616!2.26e-21!49;UBERON:0002346!4.05e-21!71;UBERON:0003075!4.05e-21!71;UBERON:0007284!4.05e-21!71;UBERON:0002020!3.12e-19!34;UBERON:0003056!3.09e-18!49;UBERON:0007811!1.06e-17!86;UBERON:0003080!3.81e-17!40;UBERON:0002780!1.79e-16!39;UBERON:0001890!1.79e-16!39;UBERON:0006240!1.79e-16!39;UBERON:0002791!1.92e-16!29;UBERON:0003528!1.92e-16!29;UBERON:0001893!1.92e-16!29;UBERON:0000153!4.80e-13!94;UBERON:0000956!3.82e-12!21;UBERON:0001869!3.82e-12!21;UBERON:0000203!3.82e-12!21;UBERON:0002619!3.50e-10!17;UBERON:0000119!3.31e-08!183;UBERON:0000483!5.62e-08!181;UBERON:0002021!2.60e-07!10;UBERON:0000411!2.60e-07!10;UBERON:0001950!2.60e-07!10;UBERON:0000025!5.84e-07!114;UBERON:0004111!7.03e-07!122;UBERON:0000475!9.65e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.62e-30,95;UBERON:0000924,2.62e-30,95;UBERON:0006601,2.62e-30,95;UBERON:0001016,4.62e-28,75;UBERON:0001017,6.74e-28,73;UBERON:0010371,4.06e-25,73;UBERON:0002346,1.65e-24,64;UBERON:0003075,1.65e-24,64;UBERON:0007284,1.65e-24,64;UBERON:0000073,2.41e-24,54;UBERON:0001049,6.28e-23,52;UBERON:0005068,6.28e-23,52;UBERON:0006241,6.28e-23,52;UBERON:0007135,6.28e-23,52;UBERON:0000955,8.07e-20,47;UBERON:0006238,8.07e-20,47;UBERON:0002616,2.89e-19,46;UBERON:0002020,3.12e-19,34;UBERON:0003056,3.09e-18,49;UBERON:0003080,3.81e-17,40;UBERON:0002780,1.79e-16,39;UBERON:0001890,1.79e-16,39;UBERON:0006240,1.79e-16,39;UBERON:0003528,1.92e-16,29;UBERON:0002791,1.92e-16,29;UBERON:0001893,1.92e-16,29;UBERON:0010314,3.67e-13,92;UBERON:0000956,3.82e-12,21;UBERON:0001869,3.82e-12,21;UBERON:0000203,3.82e-12,21;UBERON:0002619,3.50e-10,17;UBERON:0000119,5.51e-09,176;UBERON:0000483,9.52e-09,174;UBERON:0011216,1.39e-07,194;UBERON:0002021,2.60e-07,10;UBERON:0000411,2.60e-07,10;UBERON:0001950,2.60e-07,10;UBERON:0000025,5.84e-07,114;UBERON:0004111,7.03e-07,122
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78,46.5601579720484,43.0941309878987,45.5812485311542,60.268067593945,66.6229871141014,69.0156355306555,77.4797588272728,81.6574331738295,81.3954500143873,19.7292528539467,29.9033092087958,32.9262396009624,39.4735912338417,38.3604675728861,38.1840843609159,37.9063880825785,44.5298996166309,56.7289053343096,43.2435576278551,34.275570744686,116.608103511798,52.5058307601525,46.4253526385019,67.9485904173868,108.669204270161,119.40749422354,101.324763945334,110.324076799409,113.082423941925,116.29158695553,123.713729162903,122.504556089869,123.632216507823,126.460808160458,33.7828271586665,24.196468917773,23.2358888618542,24.6790386055195,70.1278226336851,67.9410561133279,59.1579746383266,50.3765690835805,105.831713951462,453.495729621504,456.182309378612,422.796888918275,469.331040980611,387.071623670413,381.473918181799,398.263275136765,380.971737927691,378.827053910795,398.15767973715,36.5331463496302,72.6225269589876,80.9277291274596,72.6889084034199,50.7263853559717,48.3508427223537,80.6755621919863,80.1476372659298,68.6767108526485,80.3577133408876,75.2833520674012,72.8097677750254,68.3583004530142,75.4856546853409,78.5142860623233,65.2522357057811,71.1529761301413,66.7465902804419,70.4666890373654,78.0154276712306,65.4880272056143,67.7957579528669,67.7158779450392,72.2371690662673,72.2760041589739,75.1377718078087,68.4150618544169,57.8753365163254,73.0626132490736,49.9416621775387,70.2319307295111,75.0604155701794,54.4277287415687,71.4258837867303,73.8832320057771,128.402637060104,77.899225612321,78.4279347276289,67.142204556164,67.0597914123327,59.8219015900687
|phase1_expression=73.1880231268908,77.4725404959382,75.9848729780525,36.5981695681264,48.0859900748493,34.5831300138493,36.443571932902,38.3496270621482,141.211088318122,132.71458642457,31.5041061534929,37.4131425688128,22.9408978107816,25.7015983111852,24.9832321361747,25.5118836911181,15.3903613188192,16.4040325986284,13.8485577941796,19.5219239827094,119.570865952404,58.3830793061206,52.7623574060649,84.4759992349187,83.0461597463156,67.1851398014574,72.7987773508836,74.9839889746894,88.5509134666702,79.6415210041381,87.3618211981901,16.5107975099504,23.3724619282137,31.6963362030877,19.9307617628379,27.7611857748682,21.6419517638111,210.939941891402,134.389679258094,182.709786646856,262.939475149863,209.694963882243,250.523342164075,86.8688044031483,83.1290836000019,97.6468721500146,73.5447863687157,99.2014461531032,159.711854847961,131.62904167329,99.3903593540074,123.627205353876,31.8786951509699,29.7398478224651,25.5431287348273,100.845698926091,72.7794937444442,112.416516116482,290.728754255242,312.633668749771,244.658921753385,80.3061541003843,82.704416038336,164.231698403855,161.185217098417,131.438821265029,155.192857248534,152.918885517979,213.393222130847,208.719180660794,221.051534380303,354.207220660716,339.033210360727,222.810763772001,201.275489138296,172.813131882684,494.420305687255,464.781910630083,488.161562688342,301.755826326684,261.654660702892,224.513662709964,486.895150258408,382.678574821542,384.134794910901,333.814187341666,291.007715553366,276.803177050571,70.349633606528,148.422544049727,28.6965843814661,40.4399222181252,65.9572193696518,80.9554787456726,97.4664626171504,69.8921943871843,75.4186536107508,70.899014192472,49.8789128837508,42.0474093667305,81.4074966309213,25.6652954828636,12.7402619853323,14.2213340630666,66.679240631454,60.8063677140237,61.6739822918036,77.0741188103655,46.8677569401381,63.3847933806802,59.3319817540185,63.6332849672375,61.5743377673676,62.5498958293384,59.735063224938,56.926965872343,120.631144254374,126.524437304923,81.3841707793884,40.7652461867471,35.334642953663,36.8505192382769,72.6927868750676,139.656440174508,149.544948664807,69.7397760719454,39.1795457134359,36.5940665905979,54.1319167331256,472.289886043406,281.820371336274,211.978892014402,525.470919941252,530.353858503105,417.030605431037,398.464542094413,48.3736978289002,58.3468692161336,120.548755772863,462.972082950243,53.8698633865593,84.8338765359515,98.1338607439153,78.0650956389004,96.9520112906422,102.362862507595,105.601843578814,194.286231425001,40.7423506643072,32.9044579492006,32.1990557220026,34.8521214559844,36.4241896485533,48.4070511465812,54.532266148105,30.651277090048,51.9637758611794,58.9326707292698,62.2318063676348,65.2446183486831,53.2374156157088,56.5394872987587,51.847097093161,48.7975294733561,54.4562908492445,46.2742550053312,51.7767664701265,45.4217181808289,46.570437525515,48.9219042955704,41.020817630203,44.444796177301,45.8859740958296,43.8854989346416,429.832654865076,251.395968042592,120.93327457207,97.5822590988478,37.5387320942012,42.2670742785998,42.783997158935,53.0427669759391,61.5987181450291,77.8022810800367,82.568056708745,85.6434564564857,85.9566414096922,90.9231077228059,76.4259221506951,94.3760379086933,70.677142309025,86.0290300458866,47.9859789411297,43.6429318169164,59.7350999067326,46.8398054044223,51.7853140737561,59.1244961675385,80.2471656106825,119.121389419539,139.728867778824,160.539710262262,87.4535249907089,43.3797274861845,49.9259847587536,46.7713193760496,47.2664082835212,61.5001757368663,57.5454425026009,67.3208961634897,71.9880406881157,62.6000022068826,69.0087391331302,79.6381628010597,77.385342932411,79.057188797446,78.0378748820318,128.329976682656,70.575718643643,37.8982823540969,31.9411353826371,36.3254483558903,32.1525640155248,40.7040205583612,50.7032955087209,78.4437264388351,51.5466921227245,46.0646554469452,50.3877068957659,64.2344193685693,59.7490037255999,79.8462803369944,126.664678508989,133.256892535584,248.340957874613,122.515915359301,532.22520580953,521.123158588935,63.9346286969034,45.4447668967871,82.6631534870592,91.3626661654134,92.6320610251035,59.742199488138,76.1971465361788,57.464535750133,77.7236547215797,99.0747358319347,91.7067644835935,290.153148728892,59.7567758726811,47.3654505754899,36.9753397732618,61.0389454998381,80.9745343873773,40.3015856017269,42.0229744181004,64.5029372765172,84.456341363901,75.0141760983183,67.4497845169057,42.5334463488681,47.0576539467832,83.1176673371196,81.172328602749,61.8813259489121,104.855398572167,64.2818105691778,76.3216234318252,68.3735141750779,71.290773924194,87.4007206250146,95.6029809698323,97.7332486657864,52.5664626062711,85.3683245581195,92.401398785029,72.5499512942512,55.2208339299997,80.6986935538725,103.853939282729,147.56266887081,73.4531708307224,574.262160326548,41.0090113914846,44.7859503480193,51.2988840814101,43.5131135680836,39.6413260390973,42.7815183896197,42.1546506384761,43.5249016726576,40.2161923770873,84.9656850033451,43.9707031077778,46.5601579720484,43.0941309878987,45.5812485311542,60.268067593945,66.6229871141014,69.0156355306555,77.4797588272728,81.6574331738295,81.3954500143873,19.7292528539467,29.9033092087958,32.9262396009624,39.4735912338417,38.3604675728861,38.1840843609159,37.9063880825785,44.5298996166309,56.7289053343096,43.2435576278551,34.275570744686,116.608103511798,52.5058307601525,46.4253526385019,67.9485904173868,108.669204270161,119.40749422354,101.324763945334,110.324076799409,113.082423941925,116.29158695553,123.713729162903,122.504556089869,123.632216507823,126.460808160458,33.7828271586665,24.196468917773,23.2358888618542,24.6790386055195,70.1278226336851,67.9410561133279,59.1579746383266,50.3765690835805,105.831713951462,453.495729621504,456.182309378612,422.796888918275,469.331040980611,387.071623670413,381.473918181799,398.263275136765,380.971737927691,378.827053910795,398.15767973715,36.5331463496302,72.6225269589876,80.9277291274596,72.6889084034199,50.7263853559717,48.3508427223537,80.6755621919863,80.1476372659298,68.6767108526485,80.3577133408876,75.2833520674012,72.8097677750254,68.3583004530142,75.4856546853409,78.5142860623233,65.2522357057811,71.1529761301413,66.7465902804419,70.4666890373654,78.0154276712306,65.4880272056143,67.7957579528669,67.7158779450392,72.2371690662673,72.2760041589739,75.1377718078087,68.4150618544169,57.8753365163254,73.0626132490736,49.9416621775387,70.2319307295111,75.0604155701794,54.4277287415687,71.4258837867303,73.8832320057771,128.402637060104,77.899225612321,78.4279347276289,67.142204556164,67.0597914123327,59.8219015900687
|short_description=p2@Rtn3
}}
}}

Latest revision as of 04:05, 26 September 2015

Short description:p2@Rtn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rtn3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 51bp_to_ENSMUST00000025667, NM_053076_5end
EntrezGene:Rtn3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rtn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G773.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I577.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I675.98
CD326+ enterocyte, pool1.CNhs13542.11848-124I336.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I448.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I836.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E938.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7141.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2132.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F137.41
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.51
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3119.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H258.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I952.76
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D184.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D283.05
GP2+ M cell, pool1.CNhs13228.11845-124H967.19
GP2+ M cell, pool2.CNhs13231.11846-124I172.80
GP2+ M cell, pool3.CNhs13240.11847-124I274.98
Ileum epithelium, pool1.CNhs13199.10252-104B988.55
Ileum epithelium, pool2.CNhs13232.10253-104C179.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C887.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.76
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8210.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1134.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3182.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9262.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2209.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4250.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D886.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D983.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B397.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B773.54
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C299.20
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8159.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3131.63
Mouse Astrocytes, donor2.CNhs12078.11552-120C499.39
Mouse Astrocytes, donor3.CNhs12107.11633-122C4123.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A125.54
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1100.85
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E172.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5112.42
Mouse Granule cells, donor1.CNhs12131.11713-123C3290.73
Mouse Granule cells, donor2.CNhs12357.11731-123E3312.63
Mouse Granule cells, donor3.CNhs12108.11636-122C7244.66
Mouse Meningeal cells, donor1.CNhs12132.11716-123C680.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D182.70
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7164.23
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7161.19
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2131.44
Mouse Microglia, donor1.CNhs12629.11718-123C8155.19
Mouse Microglia, donor2.CNhs12634.11736-123E8152.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5213.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5208.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9221.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1354.21
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5339.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2222.81
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2201.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6172.81
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3494.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3464.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7488.16
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4301.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4261.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8224.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4486.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5382.68
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6384.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6333.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6291.01
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1276.80
Mouse Schwann, donor1.CNhs12507.11728-123D970.35
Mouse Schwann, donor2.CNhs12573.11746-123F9148.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F740.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C465.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C880.96
Mouse hepatocyte, donor6.CNhs13090.11822-124F497.47
Mouse hepatocyte, donor8.CNhs13091.11824-124F669.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A775.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I770.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E349.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.05
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G681.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G166.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G260.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G361.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B677.07
accessory axillary lymph node, adult.CNhs10475.1063-29H946.87
adrenal gland, adult.CNhs10508.49-24D763.38
adrenal gland, embryo E14.CNhs11038.406-44C559.33
adrenal gland, embryo E16.CNhs11004.1254-43D663.63
adrenal gland, embryo E17.CNhs11043.1263-45I161.57
adrenal gland, embryo E18.CNhs11026.1262-18F562.55
adrenal gland, neonate N00.CNhs11191.1311-23C159.74
adrenal gland, neonate N25.CNhs11223.1377-27I356.93
amnion, adult pregnant day17.5.CNhs10488.583-22A8120.63
aorta, adult.CNhs10498.46-23H1126.52
bone (os femoris), adult.CNhs10483.56-12G281.38
bone (os femoris), neonate N02.CNhs11227.1985-43F540.77
bone (os femoris), neonate N16.CNhs11225.1525-43A635.33
bone (os femoris), neonate N20.CNhs11195.1350-25C336.85
cecum, adult.CNhs10467.37-13H472.69
cerebellum, adult.CNhs10494.15-8B2139.66
cerebellum, neonate N30.CNhs11135.1395-42I2149.54
colon, adult.CNhs10468.36-18H769.74
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C739.18
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D136.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D454.13
corpora quadrigemina, adult.CNhs10501.16-22A4472.29
corpus striatum, adult.CNhs10487.19-21D8281.82
corpus striatum, neonate N00.CNhs11226.630-43F1211.98
cortex, adult.CNhs10473.12-14D5525.47
cortex, neonate N30.CNhs11107.1392-42F2530.35
diencephalon, adult.CNhs10482.20-12F2417.03
diencephalon, neonate N30.CNhs11201.1388-42B2398.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B148.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A258.35
epididymis, adult.CNhs10490.58-23B2120.55
eyeball, adult.CNhs10484.31-12G4462.97
eyeball, embryo E12.CNhs11016.345-16C653.87
eyeball, embryo E14.CNhs10521.399-16E284.83
eyeball, embryo E15.CNhs10593.426-16C998.13
eyeball, embryo E17.CNhs11023.1261-18D478.07
eyeball, neonate N00.CNhs11207.633-15C696.95
eyeball, neonate N01.CNhs11140.1532-43E7102.36
eyeball, neonate N02.CNhs11205.1551-44G8105.60
eyeball, neonate N16.CNhs11188.777-19A2194.29
forelimb, embryo E11.CNhs10596.335-25E240.74
forelimb, embryo E12.CNhs10600.359-14H232.90
forelimb, embryo E13.CNhs10589.384-1E232.20
forelimb, embryo E14.CNhs10577.413-26A834.85
forelimb, embryo E15.CNhs11007.437-20E736.42
forelimb, embryo E17.CNhs10598.1517-43C448.41
forelimb, embryo E18.CNhs11008.1520-43B554.53
gonad, embryo E13.CNhs11044.1564-45I630.65
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C851.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D258.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D562.23
heart, embryo E11.CNhs10586.331-24E965.24
heart, embryo E12.CNhs11015.353-12F553.24
heart, embryo E13.CNhs11013.376-3I956.54
heart, embryo E14.CNhs10597.403-26D451.85
heart, embryo E15.CNhs11017.431-16C848.80
heart, embryo E16.CNhs11021.457-17C654.46
heart, embryo E17.CNhs11025.479-18E546.27
heart, embryo E18.CNhs11030.1283-20G351.78
heart, neonate N00.CNhs11213.639-21E345.42
heart, neonate N03.CNhs11221.1349-25I246.57
heart, neonate N10.CNhs11118.749-24G148.92
heart, neonate N16.CNhs11209.782-15G141.02
heart, neonate N20.CNhs11127.821-26I644.44
heart, neonate N25.CNhs11196.1351-25D345.89
heart, neonate N30.CNhs11202.1390-42D243.89
hippocampus, adult.CNhs10478.13-16E8429.83
hippocampus, neonate N00.CNhs11228.627-43G1251.40
intestinal mucosa, adult.CNhs10506.860-29I3120.93
intestine, adult.CNhs10496.178-9A397.58
intestine, embryo E12.CNhs11019.1251-16I537.54
intestine, embryo E13.CNhs11010.381-16D542.27
intestine, embryo E15.CNhs10602.976-16D842.78
intestine, embryo E16.CNhs10585.463-22H453.04
intestine, embryo E17.CNhs10582.482-18D361.60
intestine, embryo E18.CNhs10526.1289-20F777.80
intestine, neonate N00.CNhs11126.644-26D182.57
intestine, neonate N01.CNhs11192.1322-23E985.64
intestine, neonate N06.CNhs11102.688-20B885.96
intestine, neonate N07.CNhs11095.720-20F290.92
intestine, neonate N10.CNhs11098.755-23A576.43
intestine, neonate N20.CNhs11187.827-18D194.38
intestine, neonate N25.CNhs11121.1352-25E370.68
intestine, neonate N30.CNhs11131.1384-42G186.03
kidney, embryo E14.CNhs10606.411-4I947.99
kidney, embryo E15.CNhs10997.434-16F843.64
kidney, embryo E16.CNhs10584.464-22A559.74
kidney, embryo E17.CNhs11028.483-18I246.84
kidney, embryo E18.CNhs11001.1288-20C751.79
kidney, neonate N00.CNhs11214.646-21G759.12
kidney, neonate N10.CNhs11206.758-6D580.25
kidney, neonate N20.CNhs11113.832-19I1119.12
kidney, neonate N25.CNhs11122.1353-25F3139.73
kidney, neonate N30.CNhs11203.1385-42H1160.54
liver, adult pregnant day01.CNhs10466.508-5B287.45
liver, embryo E12.CNhs10601.355-15F843.38
liver, embryo E13.CNhs10524.378-3H649.93
liver, embryo E14.CNhs10594.409-16E146.77
liver, embryo E15.CNhs10520.433-16D747.27
liver, embryo E16.CNhs10523.462-17F561.50
liver, embryo E17.CNhs10510.481-18A357.55
liver, embryo E18.CNhs10579.499-43G467.32
liver, neonate N00.CNhs11117.641-24F471.99
liver, neonate N03.CNhs11123.1345-25G262.60
liver, neonate N06.CNhs11101.684-20A869.01
liver, neonate N07.CNhs11103.716-20H279.64
liver, neonate N10.CNhs11115.751-24B977.39
liver, neonate N20.CNhs11220.823-25A379.06
liver, neonate N25.CNhs11198.1368-26H178.04
liver, neonate N30.CNhs11106.1382-42D1128.33
lung, adult.CNhs10474.28-22B170.58
lung, embryo E12.CNhs10522.354-16G237.90
lung, embryo E14.CNhs10604.404-26F831.94
lung, embryo E15.CNhs11020.432-17C536.33
lung, embryo E16.CNhs10998.458-17B632.15
lung, embryo E17.CNhs10605.480-44A640.70
lung, embryo E18.CNhs10583.1287-20I650.70
lung, neonate N00.CNhs11224.640-42C678.44
lung, neonate N06.CNhs11212.683-20E551.55
lung, neonate N07.CNhs11111.715-19A346.06
lung, neonate N10.CNhs11219.750-23E650.39
lung, neonate N20.CNhs11109.822-18A464.23
lung, neonate N25.CNhs11119.1359-25C759.75
lung, neonate N30.CNhs11133.1394-42H279.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1126.66
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1133.26
mammary gland, adult lactating day02.CNhs10480.595-22B6248.34
mammary gland, adult pregnant day19.CNhs10476.588-5H2122.52
medulla oblongata, adult.CNhs10477.17-12C2532.23
medulla oblongata, neonate N30.CNhs11200.1396-42A3521.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C763.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C245.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E182.66
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E291.36
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E392.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D759.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D876.20
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D957.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D477.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D599.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D691.71
olfactory brain, adult.CNhs10489.18-22I9290.15
ovary, adult.CNhs10507.91-2I759.76
ovary, embryo E18.CNhs11040.505-44H747.37
ovary, neonate N00.CNhs11217.1299-22I436.98
oviduct, adult pregnant day01.CNhs10500.988-6G661.04
pancreas, adult.CNhs10486.34-16E480.97
pancreas, embryo E14.CNhs11012.405-44F440.30
pancreas, embryo E15.CNhs11042.1556-45F242.02
pancreas, embryo E16.CNhs11003.460-26E564.50
pancreas, embryo E17.CNhs10599.1558-45G384.46
pancreas, embryo E18.CNhs10580.1535-43I775.01
pancreas, neonate N00.CNhs11105.645-26G967.45
pancreas, neonate N01.CNhs11138.1531-43D742.53
pancreas, neonate N02.CNhs11139.1539-43D847.06
pancreas, neonate N16.CNhs11136.787-43B683.12
pancreas, neonate N25.CNhs11094.1555-45E281.17
pancreas, neonate N30.CNhs11182.1548-44H561.88
pituitary gland, adult.CNhs10493.21-1G8104.86
pituitary gland, embryo E12.CNhs11018.346-16E664.28
pituitary gland, embryo E13.CNhs11009.370-44C776.32
pituitary gland, embryo E14.CNhs11037.398-44A568.37
pituitary gland, embryo E15.CNhs10592.427-16B971.29
pituitary gland, embryo E16.CNhs11036.449-43F687.40
pituitary gland, embryo E17.CNhs11039.1265-44F595.60
pituitary gland, neonate N00.CNhs11190.1308-22E997.73
placenta, adult pregnant day10.CNhs10472.539-13I752.57
placenta, adult pregnant day17.CNhs10464.577-18G385.37
prostate, adult.CNhs10470.859-1F892.40
skin, adult.CNhs10492.30-1C372.55
skin, neonate N00.CNhs11124.650-25G455.22
skin, neonate N03.CNhs11215.662-22H380.70
skin, neonate N06.CNhs11097.693-20I5103.85
skin, neonate N10.CNhs11108.762-6C4147.56
small intestine, neonate N16.CNhs11114.790-21I173.45
spinal cord, adult.CNhs10505.24-13C9574.26
spleen, adult.CNhs10465.25-2G241.01
spleen, embryo E16.CNhs11035.461-43C144.79
spleen, embryo E18.CNhs11011.1271-21F251.30
spleen, neonate N10.CNhs11116.752-24D143.51
spleen, neonate N20.CNhs11112.824-19H139.64
spleen, neonate N25.CNhs11099.1354-25G342.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C642.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D340.22
stomach, adult.CNhs10503.33-1H684.97
stomach, embryo E12.CNhs10588.356-43E343.97
stomach, embryo E15.CNhs10603.1252-16G846.56
stomach, embryo E16.CNhs11022.459-17D443.09
stomach, embryo E17.CNhs11006.1035-18D545.58
stomach, embryo E18.CNhs10999.1286-20C660.27
stomach, neonate N03.CNhs11193.1340-24B866.62
stomach, neonate N07.CNhs11210.718-18A969.02
stomach, neonate N25.CNhs11104.1355-25E477.48
stomach, neonate N30.CNhs11134.1386-42I181.66
submandibular gland, adult.CNhs10469.59-29C181.40
testis, adult.CNhs10504.57-7G519.73
testis, embryo E13.CNhs11031.389-23F529.90
testis, embryo E15.CNhs11034.443-27C532.93
testis, embryo E16.CNhs11033.470-26G539.47
testis, embryo E17.CNhs11029.486-18I538.36
testis, embryo E18.CNhs11027.503-18G538.18
testis, neonate N00.CNhs11189.1300-22B737.91
testis, neonate N07.CNhs11222.726-26I444.53
testis, neonate N10.CNhs11204.763-44D956.73
testis, neonate N20.CNhs11110.839-18H343.24
testis, neonate N30.CNhs11130.1391-42E234.28
thymus, adult.CNhs10471.38-12B5116.61
thymus, embryo E14.CNhs11041.402-44I452.51
thymus, embryo E15.CNhs11005.430-45I246.43
thymus, embryo E16.CNhs11002.456-26C567.95
thymus, embryo E17.CNhs10581.478-18C1108.67
thymus, embryo E18.CNhs10595.1273-19G4119.41
thymus, neonate N02.CNhs11181.1541-43F8101.32
thymus, neonate N03.CNhs11137.2104-43C7110.32
thymus, neonate N06.CNhs11197.681-26C4113.08
thymus, neonate N07.CNhs11211.713-19D3116.29
thymus, neonate N10.CNhs11194.748-24E4123.71
thymus, neonate N20.CNhs11186.820-7A2122.50
thymus, neonate N25.CNhs11125.1362-25G7123.63
thymus, neonate N30.CNhs11132.1393-42G2126.46
tongue, adult.CNhs10499.32-1B433.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H324.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.68
urinary bladder, adult.CNhs10481.879-12E470.13
uterus, adult pregnant day19.CNhs10497.590-15F567.94
uterus, adult.CNhs10509.92-27E559.16
vagina, adult.CNhs10502.89-27D550.38
vesicular gland, adult.CNhs10491.51-27F8105.83
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1453.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2456.18
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3422.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7469.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4387.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5381.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6398.26
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7380.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8378.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9398.16
whole body, embryo E11.CNhs11014.324-5I836.53
whole body, embryo E12.CNhs10587.857-27C972.62
whole body, embryo E13.CNhs10512.372-23H280.93
whole body, embryo E14.5.CNhs10578.420-27D272.69
whole body, embryo E14.CNhs10519.395-14B150.73
whole body, embryo E16.CNhs10514.453-14F248.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G580.68
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G580.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G568.68
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G580.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G575.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G572.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G568.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G575.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G578.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G565.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G571.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G566.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G570.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G578.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G565.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G567.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G567.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G572.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G572.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G575.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G568.42
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G557.88
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G573.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G549.94
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G575.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G554.43
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G571.43
whole body, embryo E17.5.CNhs10513.490-9F973.88
whole body, embryo E17.CNhs10517.475-3I5128.40
whole body, embryo E18.CNhs10516.493-3B377.90
whole body, neonate N00.CNhs10525.657-19C278.43
whole body, neonate N01.CNhs10576.659-23C667.14
whole body, neonate N06.CNhs10515.692-21D167.06
whole body, neonate N10.CNhs10518.761-6B459.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.24e-1344
neurectodermal cell1.24e-1344
neural cell1.33e-1343
CNS neuron (sensu Vertebrata)3.84e-1323
neuroblast (sensu Vertebrata)3.84e-1323
electrically responsive cell4.65e-1239
electrically active cell4.65e-1239
neuron1.56e-1133
neuronal stem cell1.56e-1133
neuroblast1.56e-1133
electrically signaling cell1.56e-1133

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.62e-3095
ectoderm2.62e-3095
presumptive ectoderm2.62e-3095
nervous system4.62e-2875
central nervous system6.74e-2873
ecto-epithelium4.06e-2573
neurectoderm1.65e-2464
neural plate1.65e-2464
presumptive neural plate1.65e-2464
regional part of nervous system2.41e-2454
neural tube6.28e-2352
neural rod6.28e-2352
future spinal cord6.28e-2352
neural keel6.28e-2352
brain8.07e-2047
future brain8.07e-2047
regional part of brain2.89e-1946
gray matter3.12e-1934
pre-chordal neural plate3.09e-1849
anterior neural tube3.81e-1740
regional part of forebrain1.79e-1639
forebrain1.79e-1639
future forebrain1.79e-1639
brain grey matter1.92e-1629
regional part of telencephalon1.92e-1629
telencephalon1.92e-1629
structure with developmental contribution from neural crest3.67e-1392
cerebral cortex3.82e-1221
cerebral hemisphere3.82e-1221
pallium3.82e-1221
regional part of cerebral cortex3.50e-1017
cell layer5.51e-09176
epithelium9.52e-09174
organ system subdivision1.39e-07194
occipital lobe2.60e-0710
visual cortex2.60e-0710
neocortex2.60e-0710
tube5.84e-07114
anatomical conduit7.03e-07122
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