Personal tools

FFCP PHASE1:Mm9::chr19:53214961..53214995,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:53214961..53214995,+
|DHSsupport=NA
|short_description=p3@Add3
|DPIdataset=NA
|description=CAGE_peak_3_at_Add3_5end
|association_with_transcript=26bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end
|EntrezGene=27360
|EntrezGene=27360
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q9QYB5,Q3UNK1,Q8BM29
|UniProt=Q9QYB5,Q3UNK1,Q8BM29
|association_with_transcript=26bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end
|cluster_id=chr19:53214961..53214995,+
|description=CAGE_peak_3_at_Add3_5end
|id=chr19:53214961..53214995,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!6.97e-07!33
|ontology_enrichment_uberon_v019_2=UBERON:0004872,6.69e-07,33
|phase1_expression=9.12848428497326,0.348975407639361,0.454999239389536,0,0,0.16787927191189,1.40167584357315,2.1950964985068,1.40788722151667,2.10658073689794,0,0,1.19840510951844,0.524522414513984,2.33176833270964,2.63217847606774,0,17.3504190947031,18.5104485367747,16.5511964201232,6.03807360072595,0,0.261199789138935,1.75991665072747,2.2940928106717,0,0,1.07735616342945,7.60093677825496,4.78857246543868,0.221730510655305,0,0.61506478758457,0,1.1554064790051,0.997407872150954,0.816677425049476,61.9426813490623,46.880120671428,53.3994218853274,74.7053989799388,58.0588662214679,51.4640974213023,20.6470781479947,17.6395860321955,2.38610777810186,6.25913075478431,0.436050312760893,3.95435128922049,2.72201858703997,14.1386285841616,1.43752564364972,19.2949996966397,1.45072428402269,1.00828139742739,7.20326420900652,12.8940047972441,6.18806510732931,0.202316460859598,1.05798195854407,0,6.09920157724438,4.4464739805557,0.899899717281399,0.988866362566974,0,2.99600110518405,1.92109152660777,1.03689612308478,1.21505344498522,0.630974884054146,5.14171771926846,10.8225585066291,0.61245399607477,0.862609239164127,0.919218786610021,8.8092704799511,5.61824287574826,5.9906547969935,1.05509030184155,1.18933936683133,1.56274011167028,5.862842979029,3.37657566019008,9.62628960993904,9.1334861496837,7.40332740155335,3.16879057903011,0.454357159999104,2.04043212288321,15.0729534124872,12.0459342777394,0,0,0,0.896053774194671,5.89866564553358,2.38602451609281,1.03914401841148,2.82671659608272,1.40843419776681,0,0,0,0,0.506719730950197,0,3.4255163915718,8.2860122767095,4.00793775475027,5.89850111004862,13.7009465240464,11.3001593655469,12.2085338847624,8.34879820663504,5.52933001850572,3.95511948374998,25.3048874609845,7.96149496754887,5.82360659810673,5.30019644304944,5.81850303762267,3.72783522436244,8.19786231632332,10.4723353406728,2.04365644166873,0.599075622529601,1.19980546198682,1.77898317902291,5.09288173976397,8.23501085073528,1.25654352112864,6.95297280769106,2.55715457330331,5.81806524766768,4.70499662896497,16.7016556714519,8.70848794270651,2.0217820674694,6.10281382070775,0.520481771850815,1.37941262660084,2.52086981727489,6.32960234910003,3.60593445502038,3.58718416797579,4.02917415606834,7.24369438069244,0,1.32374256117473,1.93546236580344,5.69908904311695,8.34141747676794,14.9748431604532,15.2278780941878,5.57295947091781,3.51106593656617,1.02939162845886,4.83077948972507,9.52778553663309,9.38104239924385,9.54328925743379,7.10234206755631,7.87056926989615,10.3358965634543,11.39416329277,11.5357562601836,4.67061369468678,6.08871444679878,8.20837320395476,8.18794976413143,11.1111990443253,9.87975518809728,8.18659154438268,6.9395683026162,2.36680608472354,0.330418782983798,2.3800550999719,0.853153002140936,5.80591679651096,8.50525244725816,10.2858597557905,9.78463392917429,6.84812254005213,5.21981967698963,7.74085087202851,6.53471542880701,7.56034593756373,5.26403035221624,7.19055526923377,3.8904848977445,3.58454291857861,5.12103332573321,5.9409226557059,5.63538678365402,7.33144780243131,12.0250542043928,7.71494018793504,11.6355228308633,6.4948465111025,4.08196692387575,4.56569506510662,0.889357881261447,2.8363667971736,3.34150291692445,4.49724224769707,5.68008339887808,6.51178331331525,5.85639459097266,5.4662266115654,5.5125977103512,2.47105271869273,7.18841032636773,5.20997326735905,5.92871578917665,2.77836765741823,3.94674309748207,1.4473305640901,7.7596339869974,12.6959245886225,8.63714375142737,9.50572480341054,9.15291968325158,10.5528942188344,13.3304438896168,7.61021226645415,15.2906089783005,12.4020226203314,13.2347457985714,13.2729284919748,13.6421135674058,8.53429445630918,0,0.54390568381871,3.93411418415229,2.75936746304733,5.29816946959713,2.81308047821288,0.819674726883377,7.82659874333556,2.83957397474631,2.73307121007647,6.24727853425117,3.10659437338318,3.11918143715352,2.83076530788832,6.47697122679831,8.18316402151673,8.30104333687699,14.1381379225595,7.80670468645477,19.7652820070653,15.3113741792362,5.77395430403874,5.30980553359851,5.09839335925461,6.34879469625977,8.48722858901541,9.7449624650655,13.8345816574767,11.3708448994017,15.9954840970102,14.6163925137736,4.42451461110142,6.32511651449993,3.09406629744561,1.02131881726136,2.16073312837572,7.89087971074802,7.50179622610573,10.4630737848941,12.1290795969408,12.176627524557,3.65357938937519,39.1901752466396,4.87213762986786,5.29268155331909,10.8824926941377,18.5684090700291,10.434136012571,6.92359595218192,4.59594519286172,3.49777003955821,4.07935664423121,7.00570611271196,12.1768252098301,6.66700298530962,5.27431679613135,4.64760374251486,5.71945433016307,0.339956859987711,0.69975726161829,0.276399947608848,6.68269432610579,2.53068794864908,6.70954241518601,8.7484326065659,9.61806161666556,10.4814030598165,7.41753905116514,9.09188012978695,4.97336289769656,4.92536898508813,2.4853572523477,1.12738587736838,3.28936401296753,2.97825282822776,3.50012139019286,5.94135187997563,8.95467465101124,7.86293498926552,6.51021924219751,8.91304427618542,4.83168241652012,4.60848010012585,1.89606672376907,5.47358081283443,6.47079030138412,2.5984164595559,3.04345382634718,2.18549490259391,1.56254084375959,1.32920574457119,1.71642964911851,0.685861259894999,0.504130925684203,0.779663045918019,0.673482891482306,0.701261413089414,8.61575457737803,0,0,0,21.0576657495088,39.4133198447482,14.8352815656485,4.93047271881851,56.1760756519607,7.34177395402186,7.82552902062201,7.44764167471216,9.10821866421544,9.59115527678899,9.82012066606611,7.42524750254986,4.5032120322422,4.53142408984205,6.21312374102184,1.3492355185943,2.39414924040619,5.12200817262403,7.05009479498053,5.8691685535835,6.98605332110054,7.55638874525492,6.38708677440572,9.62757628775446,6.82282471762253,9.12525479604863,7.35642731405697,8.61501868722918,8.45132011744274,7.69635284005218,5.23923060411381,7.3007125345259,7.5234595980845,7.41754621445952,7.06554816645107,6.51451579532289,7.45398385869217,6.43777712857767,9.73820991436601,5.74067220533517,7.61531471025089,6.21955107767427,4.99832451731901,8.96307151382688,5.05028044491965,6.28765596058123,8.17587203717177,4.50154147486658,7.12709469455443,7.71626443924566,5.49583271463481,9.35726433781634,6.87587372954555,9.56441660344217,9.9266138603782,6.72416723299222
|phase1_expression=9.12848428497326,0.348975407639361,0.454999239389536,0,0,0.16787927191189,1.40167584357315,2.1950964985068,1.40788722151667,2.10658073689794,0,0,1.19840510951844,0.524522414513984,2.33176833270964,2.63217847606774,0,17.3504190947031,18.5104485367747,16.5511964201232,6.03807360072595,0,0.261199789138935,1.75991665072747,2.2940928106717,0,0,1.07735616342945,7.60093677825496,4.78857246543868,0.221730510655305,0,0.61506478758457,0,1.1554064790051,0.997407872150954,0.816677425049476,61.9426813490623,46.880120671428,53.3994218853274,74.7053989799388,58.0588662214679,51.4640974213023,20.6470781479947,17.6395860321955,2.38610777810186,6.25913075478431,0.436050312760893,3.95435128922049,2.72201858703997,14.1386285841616,1.43752564364972,19.2949996966397,1.45072428402269,1.00828139742739,7.20326420900652,12.8940047972441,6.18806510732931,0.202316460859598,1.05798195854407,0,6.09920157724438,4.4464739805557,0.899899717281399,0.988866362566974,0,2.99600110518405,1.92109152660777,1.03689612308478,1.21505344498522,0.630974884054146,5.14171771926846,10.8225585066291,0.61245399607477,0.862609239164127,0.919218786610021,8.8092704799511,5.61824287574826,5.9906547969935,1.05509030184155,1.18933936683133,1.56274011167028,5.862842979029,3.37657566019008,9.62628960993904,9.1334861496837,7.40332740155335,3.16879057903011,0.454357159999104,2.04043212288321,15.0729534124872,12.0459342777394,0,0,0,0.896053774194671,5.89866564553358,2.38602451609281,1.03914401841148,2.82671659608272,1.40843419776681,0,0,0,0,0.506719730950197,0,3.4255163915718,8.2860122767095,4.00793775475027,5.89850111004862,13.7009465240464,11.3001593655469,12.2085338847624,8.34879820663504,5.52933001850572,3.95511948374998,25.3048874609845,7.96149496754887,5.82360659810673,5.30019644304944,5.81850303762267,3.72783522436244,8.19786231632332,10.4723353406728,2.04365644166873,0.599075622529601,1.19980546198682,1.77898317902291,5.09288173976397,8.23501085073528,1.25654352112864,6.95297280769106,2.55715457330331,5.81806524766768,4.70499662896497,16.7016556714519,8.70848794270651,2.0217820674694,6.10281382070775,0.520481771850815,1.37941262660084,2.52086981727489,6.32960234910003,3.60593445502038,3.58718416797579,4.02917415606834,7.24369438069244,0,1.32374256117473,1.93546236580344,5.69908904311695,8.34141747676794,14.9748431604532,15.2278780941878,5.57295947091781,3.51106593656617,1.02939162845886,4.83077948972507,9.52778553663309,9.38104239924385,9.54328925743379,7.10234206755631,7.87056926989615,10.3358965634543,11.39416329277,11.5357562601836,4.67061369468678,6.08871444679878,8.20837320395476,8.18794976413143,11.1111990443253,9.87975518809728,8.18659154438268,6.9395683026162,2.36680608472354,0.330418782983798,2.3800550999719,0.853153002140936,5.80591679651096,8.50525244725816,10.2858597557905,9.78463392917429,6.84812254005213,5.21981967698963,7.74085087202851,6.53471542880701,7.56034593756373,5.26403035221624,7.19055526923377,3.8904848977445,3.58454291857861,5.12103332573321,5.9409226557059,5.63538678365402,7.33144780243131,12.0250542043928,7.71494018793504,11.6355228308633,6.4948465111025,4.08196692387575,4.56569506510662,0.889357881261447,2.8363667971736,3.34150291692445,4.49724224769707,5.68008339887808,6.51178331331525,5.85639459097266,5.4662266115654,5.5125977103512,2.47105271869273,7.18841032636773,5.20997326735905,5.92871578917665,2.77836765741823,3.94674309748207,1.4473305640901,7.7596339869974,12.6959245886225,8.63714375142737,9.50572480341054,9.15291968325158,10.5528942188344,13.3304438896168,7.61021226645415,15.2906089783005,12.4020226203314,13.2347457985714,13.2729284919748,13.6421135674058,8.53429445630918,0,0.54390568381871,3.93411418415229,2.75936746304733,5.29816946959713,2.81308047821288,0.819674726883377,7.82659874333556,2.83957397474631,2.73307121007647,6.24727853425117,3.10659437338318,3.11918143715352,2.83076530788832,6.47697122679831,8.18316402151673,8.30104333687699,14.1381379225595,7.80670468645477,19.7652820070653,15.3113741792362,5.77395430403874,5.30980553359851,5.09839335925461,6.34879469625977,8.48722858901541,9.7449624650655,13.8345816574767,11.3708448994017,15.9954840970102,14.6163925137736,4.42451461110142,6.32511651449993,3.09406629744561,1.02131881726136,2.16073312837572,7.89087971074802,7.50179622610573,10.4630737848941,12.1290795969408,12.176627524557,3.65357938937519,39.1901752466396,4.87213762986786,5.29268155331909,10.8824926941377,18.5684090700291,10.434136012571,6.92359595218192,4.59594519286172,3.49777003955821,4.07935664423121,7.00570611271196,12.1768252098301,6.66700298530962,5.27431679613135,4.64760374251486,5.71945433016307,0.339956859987711,0.69975726161829,0.276399947608848,6.68269432610579,2.53068794864908,6.70954241518601,8.7484326065659,9.61806161666556,10.4814030598165,7.41753905116514,9.09188012978695,4.97336289769656,4.92536898508813,2.4853572523477,1.12738587736838,3.28936401296753,2.97825282822776,3.50012139019286,5.94135187997563,8.95467465101124,7.86293498926552,6.51021924219751,8.91304427618542,4.83168241652012,4.60848010012585,1.89606672376907,5.47358081283443,6.47079030138412,2.5984164595559,3.04345382634718,2.18549490259391,1.56254084375959,1.32920574457119,1.71642964911851,0.685861259894999,0.504130925684203,0.779663045918019,0.673482891482306,0.701261413089414,8.61575457737803,0,0,0,21.0576657495088,39.4133198447482,14.8352815656485,4.93047271881851,56.1760756519607,7.34177395402186,7.82552902062201,7.44764167471216,9.10821866421544,9.59115527678899,9.82012066606611,7.42524750254986,4.5032120322422,4.53142408984205,6.21312374102184,1.3492355185943,2.39414924040619,5.12200817262403,7.05009479498053,5.8691685535835,6.98605332110054,7.55638874525492,6.38708677440572,9.62757628775446,6.82282471762253,9.12525479604863,7.35642731405697,8.61501868722918,8.45132011744274,7.69635284005218,5.23923060411381,7.3007125345259,7.5234595980845,7.41754621445952,7.06554816645107,6.51451579532289,7.45398385869217,6.43777712857767,9.73820991436601,5.74067220533517,7.61531471025089,6.21955107767427,4.99832451731901,8.96307151382688,5.05028044491965,6.28765596058123,8.17587203717177,4.50154147486658,7.12709469455443,7.71626443924566,5.49583271463481,9.35726433781634,6.87587372954555,9.56441660344217,9.9266138603782,6.72416723299222
|short_description=p3@Add3
}}
}}

Latest revision as of 22:50, 25 September 2015

Short description:p3@Add3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Add3_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 26bp_to_ENSMUST00000111741, NM_001164099, NM_001164101, uc008hwi.2, uc008hwj.2_5end
EntrezGene:Add3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Add3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B97.60
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G861.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H353.40
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G974.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H258.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H451.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.29
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I111.30
adrenal gland, embryo E18.CNhs11026.1262-18F512.21
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H125.30
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.71
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B515.23
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F59.38
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C87.87
heart, embryo E16.CNhs11021.457-17C610.34
heart, embryo E17.CNhs11025.479-18E511.39
heart, embryo E18.CNhs11030.1283-20G311.54
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I611.11
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D88.51
intestine, embryo E16.CNhs10585.463-22H410.29
intestine, embryo E17.CNhs10582.482-18D39.78
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C712.03
kidney, neonate N00.CNhs11214.646-21G77.71
kidney, neonate N10.CNhs11206.758-6D511.64
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F88.64
lung, embryo E15.CNhs11020.432-17C59.51
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A610.55
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C67.61
lung, neonate N06.CNhs11212.683-20E515.29
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E613.23
lung, neonate N20.CNhs11109.822-18A413.27
lung, neonate N25.CNhs11119.1359-25C713.64
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H719.77
ovary, neonate N00.CNhs11217.1299-22I415.31
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E58.49
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B910.46
pituitary gland, embryo E16.CNhs11036.449-43F612.13
pituitary gland, embryo E17.CNhs11039.1265-44F512.18
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I739.19
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G418.57
skin, neonate N03.CNhs11215.662-22H310.43
skin, neonate N06.CNhs11097.693-20I56.92
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C112.18
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H14.65
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I55.94
testis, embryo E18.CNhs11027.503-18G58.95
testis, neonate N00.CNhs11189.1300-22B77.86
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I26.47
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E421.06
uterus, adult pregnant day19.CNhs10497.590-15F539.41
uterus, adult.CNhs10509.92-27E514.84
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F856.18
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D19.93
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
splanchnic layer of lateral plate mesoderm6.69e-0733
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:53214961..53214995,%2B&oldid=4218698"