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FFCP PHASE1:Mm9::chr19:41970650..41970697,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:41970650..41970697,-
|DHSsupport=NA
|short_description=p1@Rrp12
|DPIdataset=NA
|description=CAGE_peak_1_at_Rrp12_5end
|association_with_transcript=-7bp_to_ENSMUST00000038677,NM_199447,uc008hmk.1_5end
|EntrezGene=107094
|EntrezGene=107094
|HGNC=
|HGNC=
|MCL_coexpression_id=301
|TSSclassifier=NA
|UniProt=Q6P5B0,Q3UJA1
|UniProt=Q6P5B0,Q3UJA1
|association_with_transcript=-7bp_to_ENSMUST00000038677,NM_199447,uc008hmk.1_5end
|cluster_id=chr19:41970650..41970697,-
|description=CAGE_peak_1_at_Rrp12_5end
|id=chr19:41970650..41970697,-
|ontology_enrichment_celltype=CL:0000117!1.22e-08!23;CL:0000337!1.22e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-08,23;CL:0000337,1.22e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.27e-12!52;UBERON:0005068!1.27e-12!52;UBERON:0006241!1.27e-12!52;UBERON:0007135!1.27e-12!52;UBERON:0002020!1.53e-12!34;UBERON:0000955!6.34e-12!50;UBERON:0006238!6.34e-12!50;UBERON:0002616!9.28e-12!49;UBERON:0002791!9.56e-11!29;UBERON:0003528!9.56e-11!29;UBERON:0001893!9.56e-11!29;UBERON:0003080!1.26e-10!40;UBERON:0002780!3.90e-10!39;UBERON:0001890!3.90e-10!39;UBERON:0006240!3.90e-10!39;UBERON:0000073!1.53e-09!75;UBERON:0001016!1.53e-09!75;UBERON:0000033!1.60e-09!63;UBERON:0000153!1.69e-09!94;UBERON:0003056!1.77e-09!49;UBERON:0007811!3.58e-09!86;UBERON:0001017!3.98e-09!73;UBERON:0005743!3.98e-09!73;UBERON:0002346!7.56e-09!71;UBERON:0003075!7.56e-09!71;UBERON:0007284!7.56e-09!71;UBERON:0004121!2.30e-08!102;UBERON:0000924!2.30e-08!102;UBERON:0006601!2.30e-08!102;UBERON:0000956!7.17e-08!21;UBERON:0001869!7.17e-08!21;UBERON:0000203!7.17e-08!21;UBERON:0002619!4.23e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-13,54;UBERON:0001049,1.27e-12,52;UBERON:0005068,1.27e-12,52;UBERON:0006241,1.27e-12,52;UBERON:0007135,1.27e-12,52;UBERON:0002020,1.53e-12,34;UBERON:0010371,5.96e-11,73;UBERON:0003528,9.56e-11,29;UBERON:0002791,9.56e-11,29;UBERON:0001893,9.56e-11,29;UBERON:0003080,1.26e-10,40;UBERON:0000955,1.57e-10,47;UBERON:0006238,1.57e-10,47;UBERON:0002616,2.29e-10,46;UBERON:0002346,3.84e-10,64;UBERON:0003075,3.84e-10,64;UBERON:0007284,3.84e-10,64;UBERON:0002780,3.90e-10,39;UBERON:0001890,3.90e-10,39;UBERON:0006240,3.90e-10,39;UBERON:0001016,1.53e-09,75;UBERON:0003056,1.77e-09,49;UBERON:0004121,3.03e-09,95;UBERON:0000924,3.03e-09,95;UBERON:0006601,3.03e-09,95;UBERON:0001017,3.98e-09,73;UBERON:0000956,7.17e-08,21;UBERON:0001869,7.17e-08,21;UBERON:0000203,7.17e-08,21;UBERON:0002619,4.23e-07,17
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.80641580101519,8.3360981522008,8.4244165841005,10.0362382086945,7.42432716737004,7.1478103583955,5.86839535649885,7.0674104335688,4.14767914533737,3.72803587852155,35.512655137104,9.27002585472668,10.5893433892542,16.7228021975881,13.6909412886395,10.9821481569006,8.80179289843155,10.9371683268918,20.0281347853108,22.2257391159926,22.1783104818556,3.79213344753814,12.7716885632803,11.5036272024607,10.9133491301348,7.16106782669926,7.3512101269068,10.2166132091974,8.56599257612548,7.26958439626663,7.84930108546498,5.94874492307359,5.16526767920688,4.71438024037614,3.97381467417334,7.25537227568676,19.3127779435436,28.9775756848606,17.2921154855001,5.79568782096571,6.75656911624255,7.69236821922513,8.57473516316263,3.51100472824754,16.3778034358949,16.5717085142584,11.4579102687879,13.2326950404639,15.7568979547248,13.5970901530146,14.1754725048679,14.8605997063993,18.5788387683524,11.9084871702919,11.1052461915069,14.3648954424371,11.439151585527,9.72426868273176,6.49800804146745,6.06683577885047,7.3341420174533,9.27157757575024,8.98573786857083,8.33900798820532,7.85785829659743,8.11093267960128,6.9294715527713,8.57937042225248,7.23686908840727,7.1444053692461,8.80720877180902,9.64546102318525,5.76920261124629,7.65434384698866,7.54312355247914,6.92155644021416,7.39152188836695,8.28474574804273,7.62285981364178,7.44608549446753,8.59761472502031,7.3659519202596,8.14824683075171,6.73370725989286,7.47400614182297,7.58484514291839,7.36615877705441,6.97215785336847,7.71626443924566,12.7403394748352,9.82512755470715,9.45432637812513,12.6250299165437,7.0589254118245,6.72416723299222
|phase1_expression=5.76535849577258,1.39590163055744,1.36499771816861,0.90739263392049,1.00179145989269,8.05820505177071,7.94282978024787,6.45616617207881,34.3524482050067,51.2601312645166,61.2960326247308,57.8348152716189,10.785645985666,13.2879011676876,12.3250611871795,10.7311891716608,5.59649502502517,10.4102514568218,11.2433835556706,11.8829102503448,15.0526623567394,3.67376519443276,4.70159620450084,4.47978783821539,2.98232065387321,4.01962374880514,3.4460959692726,5.17130958446134,1.71021077510736,5.79669298447841,6.87364583031445,33.0215950199008,42.4394703433353,47.5445043046316,9.24325183204079,11.3039558843775,7.9626048942324,0.837063261473815,4.6880120671428,4.18818995179039,12.3528612486513,0.683045484958446,0.971020706062307,7.80560271448579,5.5757312170733,5.32285581268876,4.69434806608824,11.9913836009246,10.1055644057857,10.8880743481599,6.7193482380174,8.62515386189829,13.0870432725034,13.0565185562042,14.7881271622684,5.40244815675489,4.29800159908135,4.12537673821954,12.3413041124355,16.398720357433,18.3811107016792,9.14880236586657,8.00365316500025,4.94944844504769,3.9554654502679,4.9733608046227,7.78960287347852,6.53171119046643,9.64313394468842,11.4755047581937,10.0955981448663,15.996455126613,14.5773237028065,8.57435594504678,13.0349840584801,11.0306254393203,18.7196997698961,13.7902325132003,13.6709814598057,14.7712642257817,11.9848813119157,11.4600941522487,17.0301629390842,11.8180148106653,12.2238598221448,13.5529149317887,10.2507610175354,11.7431650869939,23.2479413532875,8.08615693142605,4.34796733052517,4.30211938490693,27.8788246820178,10.2543606411185,9.74664626171504,8.06448396775204,7.3031098468511,4.94247935476367,3.63700406444016,1.41335829804136,8.87313544593087,2.56652954828636,10.1922095882658,7.11066703153331,6.71122227134764,4.81383744402687,7.07734223020697,5.93756174539112,4.91981978929626,6.38301197978747,13.0113995074602,9.74289530598852,9.91646638201052,4.82312449768392,4.9387256996996,4.90099706185734,4.44950941921873,4.33798070759735,9.73071607144862,8.25010934731787,7.72945314611377,7.27312879702833,9.31958806090611,8.19786231632332,7.12118803165747,5.10914110417183,10.7833612055328,7.7987355029143,10.8009693012105,15.2786452192919,16.0125210986519,11.0575829859321,16.5133104182663,14.3200656104985,11.0127663616567,13.1415423084884,6.21220119486929,3.98102305952298,4.54900965180614,8.20723237957248,11.3204785377552,11.7250073261071,8.28285797104606,8.13806016312861,6.46346741937615,7.94305065766069,7.96464658757695,5.95017752699736,12.9340795759705,10.5899404893979,10.5570674498369,10.7405908889512,10.2877482213471,8.00979983000983,6.99659263787008,11.9420560091096,10.5331978096985,8.23513302767089,9.94572247884574,9.94203708170409,6.56672967947069,6.48223421259654,7.33908680314152,7.28027657465394,6.78775296704464,5.58081467400979,10.9992094573844,6.889155199663,7.89887279584706,6.40253109908471,6.16122952548504,6.57899943413995,9.00155472693308,7.91817870686193,14.7202963994889,12.0398396483763,2.64335026387038,9.78467096655114,10.4511242762265,11.8440702648824,12.8867461322093,8.47070803418039,8.2279876222602,6.27744566171445,6.16887780007865,6.42325923423642,5.52937459360593,4.57599885694647,5.06906626509712,6.29173586057955,2.16138049874694,3.78368419183298,8.53505554288868,9.71112357182695,3.38123207019241,6.92414514674068,4.46090720485539,4.76923575254166,5.31186911843761,2.65698266363284,3.1399745568275,4.56569506510662,6.81841042300442,12.8470731401392,12.9728936774714,12.8171404059367,9.53442570525964,8.92355491083942,7.89340140522401,6.61701116136864,12.1601420081277,6.58947391651396,5.75072826109418,4.46569137202204,3.74445207737473,6.56705082662491,7.89348619496414,9.16642690590398,4.61882975416512,7.01118223550794,7.98528384565927,6.95954851678271,4.92849521405854,4.02015017860358,3.57065461329021,5.46374214001837,3.62560831444239,3.10050565508285,3.50800491046472,4.91589944147214,5.00786447411097,2.74833211304872,9.04747703635634,7.07077388964322,14.2611639175521,13.7968373152366,15.5734072288158,10.6662634798905,12.622990794004,15.1482556322624,5.67914794949262,7.02789739733949,4.30846795465598,6.4521575447189,4.67877215573028,5.66153061577665,3.64329631507405,4.09158201075837,4.74345333535828,10.6036034419196,5.81954349353901,8.54714897602825,7.98146100832523,5.93892442701128,3.98235415019888,12.1390318077491,9.97667737983678,5.65815239267694,7.67784921490009,10.1453598821496,5.68542244970086,5.81653967164009,6.06045543254026,9.7971394960103,7.37930260024991,7.21948802737308,4.42571487479924,9.36317688962813,9.57254259992383,8.14480733120051,9.04435191575595,10.7021290561242,7.0756078858912,11.2652031172402,11.9682571112492,7.83778662196135,4.19003956304428,6.10079135883476,8.88054346827481,10.9769523369244,11.2210003362948,12.9671310798598,6.99554007911642,14.8340241608408,7.86006051670122,7.22354037871279,10.3708935327039,6.40452753815949,7.24479406921433,8.46479240864134,11.8984900995699,8.39708713941948,9.53579819250524,5.72802370809068,9.80641580101519,8.3360981522008,8.4244165841005,10.0362382086945,7.42432716737004,7.1478103583955,5.86839535649885,7.0674104335688,4.14767914533737,3.72803587852155,35.512655137104,9.27002585472668,10.5893433892542,16.7228021975881,13.6909412886395,10.9821481569006,8.80179289843155,10.9371683268918,20.0281347853108,22.2257391159926,22.1783104818556,3.79213344753814,12.7716885632803,11.5036272024607,10.9133491301348,7.16106782669926,7.3512101269068,10.2166132091974,8.56599257612548,7.26958439626663,7.84930108546498,5.94874492307359,5.16526767920688,4.71438024037614,3.97381467417334,7.25537227568676,19.3127779435436,28.9775756848606,17.2921154855001,5.79568782096571,6.75656911624255,7.69236821922513,8.57473516316263,3.51100472824754,16.3778034358949,16.5717085142584,11.4579102687879,13.2326950404639,15.7568979547248,13.5970901530146,14.1754725048679,14.8605997063993,18.5788387683524,11.9084871702919,11.1052461915069,14.3648954424371,11.439151585527,9.72426868273176,6.49800804146745,6.06683577885047,7.3341420174533,9.27157757575024,8.98573786857083,8.33900798820532,7.85785829659743,8.11093267960128,6.9294715527713,8.57937042225248,7.23686908840727,7.1444053692461,8.80720877180902,9.64546102318525,5.76920261124629,7.65434384698866,7.54312355247914,6.92155644021416,7.39152188836695,8.28474574804273,7.62285981364178,7.44608549446753,8.59761472502031,7.3659519202596,8.14824683075171,6.73370725989286,7.47400614182297,7.58484514291839,7.36615877705441,6.97215785336847,7.71626443924566,12.7403394748352,9.82512755470715,9.45432637812513,12.6250299165437,7.0589254118245,6.72416723299222
|short_description=p1@Rrp12
}}
}}

Latest revision as of 18:50, 25 September 2015

Short description:p1@Rrp12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rrp12_5end
Coexpression cluster:MCL_coexpression_mm9:301
Association with transcript: -7bp_to_ENSMUST00000038677, NM_199447, uc008hmk.1_5end
EntrezGene:Rrp12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rrp12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E734.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F251.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E661.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F157.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I333.02
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G642.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D923.25
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C513.01
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.80
corpora quadrigemina, adult.CNhs10501.16-22A415.28
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F111.06
cortex, adult.CNhs10473.12-14D516.51
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C611.32
eyeball, embryo E14.CNhs10521.399-16E211.73
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D48.14
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G87.96
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E212.93
forelimb, embryo E12.CNhs10600.359-14H210.59
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E710.29
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.95
heart, embryo E11.CNhs10586.331-24E99.94
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G311.00
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I27.90
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D27.92
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I510.45
intestine, embryo E13.CNhs11010.381-16D511.84
intestine, embryo E15.CNhs10602.976-16D812.89
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I98.54
kidney, embryo E15.CNhs10997.434-16F89.71
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F812.85
liver, embryo E13.CNhs10524.378-3H612.97
liver, embryo E14.CNhs10594.409-16E112.82
liver, embryo E15.CNhs10520.433-16D79.53
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F87.99
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C215.57
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.15
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H78.55
ovary, neonate N00.CNhs11217.1299-22I47.98
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C79.57
pituitary gland, embryo E14.CNhs11037.398-44A58.14
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I711.97
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G48.88
skin, neonate N03.CNhs11215.662-22H310.98
skin, neonate N06.CNhs11097.693-20I511.22
skin, neonate N10.CNhs11108.762-6C412.97
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.54
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D48.42
stomach, embryo E17.CNhs11006.1035-18D510.04
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B87.15
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G535.51
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G516.72
testis, embryo E17.CNhs11029.486-18I513.69
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B78.80
testis, neonate N07.CNhs11222.726-26I410.94
testis, neonate N10.CNhs11204.763-44D920.03
testis, neonate N20.CNhs11110.839-18H322.23
testis, neonate N30.CNhs11130.1391-42E222.18
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I412.77
thymus, embryo E15.CNhs11005.430-45I211.50
thymus, embryo E16.CNhs11002.456-26C510.91
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F810.22
thymus, neonate N03.CNhs11137.2104-43C78.57
thymus, neonate N06.CNhs11197.681-26C47.27
thymus, neonate N07.CNhs11211.713-19D37.85
thymus, neonate N10.CNhs11194.748-24E45.95
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.29
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I811.11
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H211.44
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.97
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I512.74
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.22e-0823
neuroblast (sensu Vertebrata)1.22e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.38e-1354
neural tube1.27e-1252
neural rod1.27e-1252
future spinal cord1.27e-1252
neural keel1.27e-1252
gray matter1.53e-1234
ecto-epithelium5.96e-1173
brain grey matter9.56e-1129
regional part of telencephalon9.56e-1129
telencephalon9.56e-1129
anterior neural tube1.26e-1040
brain1.57e-1047
future brain1.57e-1047
regional part of brain2.29e-1046
neurectoderm3.84e-1064
neural plate3.84e-1064
presumptive neural plate3.84e-1064
regional part of forebrain3.90e-1039
forebrain3.90e-1039
future forebrain3.90e-1039
nervous system1.53e-0975
pre-chordal neural plate1.77e-0949
ectoderm-derived structure3.03e-0995
ectoderm3.03e-0995
presumptive ectoderm3.03e-0995
central nervous system3.98e-0973
cerebral cortex7.17e-0821
cerebral hemisphere7.17e-0821
pallium7.17e-0821
regional part of cerebral cortex4.23e-0717
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