FFCP PHASE1:Mm9::chr19:20460121..20460125,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:20460121..20460125,- | |||
|description=CAGE_peak_at_chr19:20460121..20460125,- | |||
|id=chr19:20460121..20460125,- | |||
|ontology_enrichment_celltype=CL:0000355!6.40e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.07e-24,9;CL:0000680,7.03e-16,6;CL:0000187,7.03e-16,6;CL:0000056,7.03e-16,6;CL:0000222,1.59e-13,7;CL:0002494,1.66e-09,3;CL:0000737,1.66e-09,3;CL:0000746,1.66e-09,3;CL:0000513,1.66e-09,3;CL:0000068,2.45e-09,3;CL:0002202,2.45e-09,3;CL:0000069,2.45e-09,3;CL:0002632,2.45e-09,3;CL:0002368,2.45e-09,3;CL:0000307,2.45e-09,3;CL:0000377,2.45e-09,3;CL:0000192,4.96e-08,3;CL:0000359,4.96e-08,3;CL:0002539,4.96e-08,3;CL:0000514,4.96e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.81e-10,3;DOID:4045,5.81e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000383!4.56e-09!10;UBERON:0001134!6.40e-09!9;UBERON:0002036!6.40e-09!9;UBERON:0002385!6.40e-09!9;UBERON:0000486!6.40e-09!9;UBERON:0001015!6.40e-09!9;UBERON:0004290!6.40e-09!9;UBERON:0003082!6.40e-09!9;UBERON:0002329!2.96e-08!11;UBERON:0003077!2.96e-08!11;UBERON:0003059!2.96e-08!11;UBERON:0007282!2.96e-08!11;UBERON:0009618!2.96e-08!11;UBERON:0007285!2.96e-08!11;UBERON:0000914!1.47e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.07e-24,9;UBERON:0002036,3.07e-24,9;UBERON:0002385,3.07e-24,9;UBERON:0000486,3.07e-24,9;UBERON:0007503,3.07e-24,9;UBERON:0001015,3.07e-24,9;UBERON:0002329,3.07e-24,9;UBERON:0003082,3.07e-24,9;UBERON:0003059,3.07e-24,9;UBERON:0007282,3.07e-24,9;UBERON:0004290,3.07e-24,9;UBERON:0009618,3.07e-24,9;UBERON:0000383,1.19e-21,10;UBERON:0007524,1.56e-19,11;UBERON:0003077,1.56e-19,11;UBERON:0007285,1.56e-19,11;UBERON:0003126,2.45e-09,3;UBERON:0001005,2.45e-09,3;UBERON:0007196,2.45e-09,3;UBERON:0001558,2.45e-09,3;UBERON:0002204,1.23e-08,32;UBERON:0001135,4.96e-08,3;UBERON:0004237,4.96e-08,3;UBERON:0004695,4.96e-08,3;UBERON:0002111,4.96e-08,3;UBERON:0004178,4.96e-08,3 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,7.0320181007142,14.1351410872926,53.5290654108223,14.3439551841274,5.82612423637384,1.00717454380462,1.31790010585369,1.10128051297009,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,4.11615097657515,3.43840127926508,9.7977697532714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0.511290967734173,1.29893002301434,1.06001872353102,0,2.56652954828636,0,7.11066703153331,4.5463118612355,2.02687892380079,5.56076889516262,0.68510327831436,0.258937883647172,0,0,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.718890747035522,0,0.381210681219194,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,0,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,1.39023624612799,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0.810676133875177,0.274561413188081,1.43768206527355,1.11642284300551,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0.975668239288994,0.472905432318573,1.10732344824387,0.318909537314974,0.327726629431476,0.518054945597687,0.723245292907558,4.52373851817817,2.17562273527484,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0.727067458955011,0,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0.65954501176592,1.29171541356724,1.08563264870681,1.67121281604391,0.984845398470368,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.69975726161829,0.276399947608848,0,0,0.406638934253697,1.40406943068342,0.836353184057875,0,1.21377911746339,0.909188012978695,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0.179427713218951,0.335769232728157,0.19318959403219,0.375364950902364,0.73260649706906,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.229741875822453,0,0.231768651889711,0.578727661391115,0.824171801606613,0,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,7.0320181007142,14.1351410872926,53.5290654108223,14.3439551841274,5.82612423637384,1.00717454380462,1.31790010585369,1.10128051297009,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,4.11615097657515,3.43840127926508,9.7977697532714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0.511290967734173,1.29893002301434,1.06001872353102,0,2.56652954828636,0,7.11066703153331,4.5463118612355,2.02687892380079,5.56076889516262,0.68510327831436,0.258937883647172,0,0,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.718890747035522,0,0.381210681219194,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,0,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,1.39023624612799,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0.810676133875177,0.274561413188081,1.43768206527355,1.11642284300551,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0.975668239288994,0.472905432318573,1.10732344824387,0.318909537314974,0.327726629431476,0.518054945597687,0.723245292907558,4.52373851817817,2.17562273527484,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0.727067458955011,0,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0.65954501176592,1.29171541356724,1.08563264870681,1.67121281604391,0.984845398470368,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.69975726161829,0.276399947608848,0,0,0.406638934253697,1.40406943068342,0.836353184057875,0,1.21377911746339,0.909188012978695,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0.179427713218951,0.335769232728157,0.19318959403219,0.375364950902364,0.73260649706906,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.229741875822453,0,0.231768651889711,0.578727661391115,0.824171801606613,0,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p@chr19:20460121..20460125,- | |||
}} | }} |
Latest revision as of 09:16, 6 August 2015
Short description: | p@chr19:20460121..20460125, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:20460121..20460125, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.07e-24 | 9 |
muscle precursor cell | 7.03e-16 | 6 |
muscle cell | 7.03e-16 | 6 |
myoblast | 7.03e-16 | 6 |
mesodermal cell | 1.59e-13 | 7 |
cardiocyte | 1.66e-09 | 3 |
striated muscle cell | 1.66e-09 | 3 |
cardiac muscle cell | 1.66e-09 | 3 |
cardiac muscle myoblast | 1.66e-09 | 3 |
duct epithelial cell | 2.45e-09 | 3 |
epithelial cell of tracheobronchial tree | 2.45e-09 | 3 |
branched duct epithelial cell | 2.45e-09 | 3 |
epithelial cell of lower respiratory tract | 2.45e-09 | 3 |
respiratory epithelial cell | 2.45e-09 | 3 |
tracheal epithelial cell | 2.45e-09 | 3 |
tracheoblast | 2.45e-09 | 3 |
smooth muscle cell | 4.96e-08 | 3 |
vascular associated smooth muscle cell | 4.96e-08 | 3 |
aortic smooth muscle cell | 4.96e-08 | 3 |
smooth muscle myoblast | 4.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.07e-24 | 9 |
striated muscle tissue | 3.07e-24 | 9 |
muscle tissue | 3.07e-24 | 9 |
multilaminar epithelium | 3.07e-24 | 9 |
epithelial vesicle | 3.07e-24 | 9 |
musculature | 3.07e-24 | 9 |
somite | 3.07e-24 | 9 |
myotome | 3.07e-24 | 9 |
presomitic mesoderm | 3.07e-24 | 9 |
presumptive segmental plate | 3.07e-24 | 9 |
dermomyotome | 3.07e-24 | 9 |
trunk paraxial mesoderm | 3.07e-24 | 9 |
musculature of body | 1.19e-21 | 10 |
dense mesenchyme tissue | 1.56e-19 | 11 |
paraxial mesoderm | 1.56e-19 | 11 |
presumptive paraxial mesoderm | 1.56e-19 | 11 |
trachea | 2.45e-09 | 3 |
respiratory airway | 2.45e-09 | 3 |
tracheobronchial tree | 2.45e-09 | 3 |
lower respiratory tract | 2.45e-09 | 3 |
musculoskeletal system | 1.23e-08 | 32 |
smooth muscle tissue | 4.96e-08 | 3 |
blood vessel smooth muscle | 4.96e-08 | 3 |
arterial system smooth muscle | 4.96e-08 | 3 |
artery smooth muscle tissue | 4.96e-08 | 3 |
aorta smooth muscle tissue | 4.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.81e-10 | 3 |
muscle cancer | 5.81e-10 | 3 |