FFCP PHASE1:Mm9::chr18:62112614..62112651,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:62112614..62112651,+ to FFCP PHASE1:Mm9::chr18:62112614..62112651,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225608 | |EntrezGene=225608 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=Q80VA5,Q3UPD8,Q6DFU9 | |UniProt=Q80VA5,Q3UPD8,Q6DFU9 | ||
|association_with_transcript=-77bp_to_ENSMUST00000051720,ENSMUST00000172152,NM_172628,uc008fcu.1,uc008fcv.1,uc012bdt.1_5end | |||
|cluster_id=chr18:62112614..62112651,+ | |||
|description=CAGE_peak_2_at_Sh3tc2_5end | |||
|id=chr18:62112614..62112651,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.64e-12!193;UBERON:0004120!2.64e-12!193;UBERON:0006603!2.64e-12!193;UBERON:0001048!1.69e-09!147;UBERON:0004872!1.70e-08!33;UBERON:0009569!2.23e-08!66;UBERON:0000466!4.60e-08!79;UBERON:0005177!1.32e-07!85;UBERON:0005172!3.88e-07!49;UBERON:0005173!3.88e-07!49;UBERON:0002417!3.88e-07!49;UBERON:0000916!3.88e-07!49;UBERON:0003104!5.39e-07!131;UBERON:0009142!5.39e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.97e-09,79;UBERON:0009569,2.07e-08,66;UBERON:0004872,6.74e-08,33;UBERON:0002100,9.89e-08,90;UBERON:0005172,1.35e-07,49;UBERON:0005173,1.35e-07,49;UBERON:0002417,1.35e-07,49;UBERON:0000916,1.35e-07,49;UBERON:0003914,4.09e-07,47;UBERON:0001048,8.13e-07,134 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,15.6561588053361,23.28465574983,27.9824751251259,0,0.137114433605739,1.27316895539409,1.27564935226605,0,0,0,0,0,0,0,0,0,0,5.71527606113668,7.38077745101484,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.771778308107841,2.29226751951005,3.6097046459421,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0.441737081903227,0.244981598429908,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.302904773332736,0.604572480854284,6.66688324013859,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,0.681721290312231,0,0,0.14084341977668,0,2.54805239706646,0,0,0,0,0.34255163915718,0.776813650941515,0.445326417194474,0.693941307064543,2.13125834818499,1.38369298353635,0.452167921657868,0.823120949949934,0.502666365318702,9.64060374164058,1.44599356919912,10.6153266233985,1.13236794963186,6.40440403535141,6.30337829075789,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0.162241263067758,1.12023300235348,3.85661608891288,0,0.631325567659422,0.520481771850815,0,0.360124259610698,0.60281927134286,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,1.19420560091096,0,0,0,1.44988040774851,0.938104239924385,1.08037236876609,1.65721314909647,0.983821158737019,0.925602677324269,0.697601834251224,1.87791380979733,0.467061369468678,2.30383789878873,1.97000956894914,1.70244500046297,1.16959989940266,1.3173006917463,1.47627060636409,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0.644337306610467,1.81515172161008,1.55664630691409,2.85338439168839,0,1.31759163779209,2.01068167040216,0.994782360205754,1.16978452271472,0.898819408654221,0,0.199141273254367,0.948339504765408,0.685491075658373,0,0.203651327845314,1.35766741017338,1.61312385747733,2.52946148497029,1.77132177575523,4.08196692387575,3.33172342588861,0,2.33583148002532,2.35870794135844,4.04751802292737,2.63718157805054,4.58236603529592,5.34714288740982,4.02774592431135,2.2698931748505,4.11842119782122,2.87536413054709,1.11642284300551,0.624075346229121,0,0.179397413521912,0,1.47802552133284,0.568474235311454,0.977789858652155,0.678980343100753,0.469380496577004,1.50755631697634,1.42826184531608,1.95133647857799,1.10344600874334,1.10732344824387,1.91345722388985,1.47476983244164,1.03610989119537,0.867894351489069,0,0,0,0,0.481651769963376,0.234423373184406,0,0.252470927204373,0,0.780877488593277,1.29254038639679,0,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,0,0.709700426041343,1.78065603667255,1.79175655288934,0.824850614862677,1.32745138339963,0.728341908464944,0,0.565815239267694,0.295301892880773,0.307435147943927,1.03371317267288,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,0.540183282093931,0.258717367565509,0,0,0.535106452806212,0.329098041204242,0,0.469343416127421,9.32061111800809,0,0.98931751764888,0.484393280087717,0.482503399425247,0.238744688006273,0.328281799490123,0.582961673259701,0.18542530201051,11.7900907750518,0.619160603889667,1.11116716421827,16.9531611304222,17.4968611482912,18.9885883761414,0,0,0,0,0.158167996790568,0.609958401380546,0.648032044930808,0.209088296014469,1.74690050996942,0.404593039154462,0.41326727862668,0.26175594198403,0,0,0,2.39226473670366,1.65458490457098,0.777804753376191,0.774958940866387,2.02747350588934,1.29092962510329,0.781226309063701,0.104859344425711,0.483168241652012,0.864090018773596,0,1.21635129174099,1.23253148597793,1.81889152168913,0.716106782669926,2.78153896693771,1.32214994471966,1.77227432609493,0.605798699688886,0.838274873204998,0.604957110821043,0.682205165178267,0.673482891482306,0.701261413089414,0.226730383615211,0,0,0,2.89784391048286,1.68914227906064,0.73260649706906,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0.798049746802062,0,1.45864030240976,0.628839487883947,0.735374033800057,1.33348036680969,0.206035057238894,0.962757628775446,0.758091635291392,1.2673964994512,1.88626341386076,1.591905626988,1.15245274328765,1.32101578597911,0.952587382566147,0.579421629724277,1.15745532278223,1.64834360321323,1.03039244094078,1.02860775715625,1.06485483695602,0.715308569841963,1.0174249164263,1.59985946706062,1.60767754994185,0.914639864363863,0.789209134313529,1.49384525230448,1.68342681497322,1.42362021749009,1.77308068276014,0.409231043169689,1.85924209423159,0.964533054905707,0.499621155875892,0.233931608445408,0.859484216193193,0,0.661774257358546,1.39120701372253 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,15.6561588053361,23.28465574983,27.9824751251259,0,0.137114433605739,1.27316895539409,1.27564935226605,0,0,0,0,0,0,0,0,0,0,5.71527606113668,7.38077745101484,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.771778308107841,2.29226751951005,3.6097046459421,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0.441737081903227,0.244981598429908,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.302904773332736,0.604572480854284,6.66688324013859,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,0.681721290312231,0,0,0.14084341977668,0,2.54805239706646,0,0,0,0,0.34255163915718,0.776813650941515,0.445326417194474,0.693941307064543,2.13125834818499,1.38369298353635,0.452167921657868,0.823120949949934,0.502666365318702,9.64060374164058,1.44599356919912,10.6153266233985,1.13236794963186,6.40440403535141,6.30337829075789,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0.162241263067758,1.12023300235348,3.85661608891288,0,0.631325567659422,0.520481771850815,0,0.360124259610698,0.60281927134286,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,1.19420560091096,0,0,0,1.44988040774851,0.938104239924385,1.08037236876609,1.65721314909647,0.983821158737019,0.925602677324269,0.697601834251224,1.87791380979733,0.467061369468678,2.30383789878873,1.97000956894914,1.70244500046297,1.16959989940266,1.3173006917463,1.47627060636409,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0.644337306610467,1.81515172161008,1.55664630691409,2.85338439168839,0,1.31759163779209,2.01068167040216,0.994782360205754,1.16978452271472,0.898819408654221,0,0.199141273254367,0.948339504765408,0.685491075658373,0,0.203651327845314,1.35766741017338,1.61312385747733,2.52946148497029,1.77132177575523,4.08196692387575,3.33172342588861,0,2.33583148002532,2.35870794135844,4.04751802292737,2.63718157805054,4.58236603529592,5.34714288740982,4.02774592431135,2.2698931748505,4.11842119782122,2.87536413054709,1.11642284300551,0.624075346229121,0,0.179397413521912,0,1.47802552133284,0.568474235311454,0.977789858652155,0.678980343100753,0.469380496577004,1.50755631697634,1.42826184531608,1.95133647857799,1.10344600874334,1.10732344824387,1.91345722388985,1.47476983244164,1.03610989119537,0.867894351489069,0,0,0,0,0.481651769963376,0.234423373184406,0,0.252470927204373,0,0.780877488593277,1.29254038639679,0,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,0,0.709700426041343,1.78065603667255,1.79175655288934,0.824850614862677,1.32745138339963,0.728341908464944,0,0.565815239267694,0.295301892880773,0.307435147943927,1.03371317267288,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,0.540183282093931,0.258717367565509,0,0,0.535106452806212,0.329098041204242,0,0.469343416127421,9.32061111800809,0,0.98931751764888,0.484393280087717,0.482503399425247,0.238744688006273,0.328281799490123,0.582961673259701,0.18542530201051,11.7900907750518,0.619160603889667,1.11116716421827,16.9531611304222,17.4968611482912,18.9885883761414,0,0,0,0,0.158167996790568,0.609958401380546,0.648032044930808,0.209088296014469,1.74690050996942,0.404593039154462,0.41326727862668,0.26175594198403,0,0,0,2.39226473670366,1.65458490457098,0.777804753376191,0.774958940866387,2.02747350588934,1.29092962510329,0.781226309063701,0.104859344425711,0.483168241652012,0.864090018773596,0,1.21635129174099,1.23253148597793,1.81889152168913,0.716106782669926,2.78153896693771,1.32214994471966,1.77227432609493,0.605798699688886,0.838274873204998,0.604957110821043,0.682205165178267,0.673482891482306,0.701261413089414,0.226730383615211,0,0,0,2.89784391048286,1.68914227906064,0.73260649706906,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0.798049746802062,0,1.45864030240976,0.628839487883947,0.735374033800057,1.33348036680969,0.206035057238894,0.962757628775446,0.758091635291392,1.2673964994512,1.88626341386076,1.591905626988,1.15245274328765,1.32101578597911,0.952587382566147,0.579421629724277,1.15745532278223,1.64834360321323,1.03039244094078,1.02860775715625,1.06485483695602,0.715308569841963,1.0174249164263,1.59985946706062,1.60767754994185,0.914639864363863,0.789209134313529,1.49384525230448,1.68342681497322,1.42362021749009,1.77308068276014,0.409231043169689,1.85924209423159,0.964533054905707,0.499621155875892,0.233931608445408,0.859484216193193,0,0.661774257358546,1.39120701372253 | ||
|short_description=p2@Sh3tc2 | |||
}} | }} |
Latest revision as of 14:27, 1 October 2015
Short description: | p2@Sh3tc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh3tc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -77bp_to_ENSMUST00000051720, ENSMUST00000172152, NM_172628, uc008fcu.1, uc008fcv.1, uc012bdt.1_5end |
EntrezGene: | Sh3tc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.97e-09 | 79 |
subdivision of trunk | 2.07e-08 | 66 |
splanchnic layer of lateral plate mesoderm | 6.74e-08 | 33 |
trunk | 9.89e-08 | 90 |
abdomen element | 1.35e-07 | 49 |
abdominal segment element | 1.35e-07 | 49 |
abdominal segment of trunk | 1.35e-07 | 49 |
abdomen | 1.35e-07 | 49 |
epithelial tube | 4.09e-07 | 47 |
primordium | 8.13e-07 | 134 |