FFCP PHASE1:Mm9::chr18:45719460..45719470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=140492 | |EntrezGene=140492 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3142 | |||
|TSSclassifier=NA | |||
|UniProt=Q80X11,B4YDY0,P58390,Q540U9 | |UniProt=Q80X11,B4YDY0,P58390,Q540U9 | ||
|association_with_transcript=-337bp_to_ENSMUST00000167895,ENSMUST00000169783,NM_080465_5end | |||
|cluster_id=chr18:45719460..45719470,+ | |||
|description=CAGE_peak_19_at_Kcnn2_5end | |||
|id=chr18:45719460..45719470,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.20e-08,5;CL:0000128,3.23e-07,6;CL:0000126,3.23e-07,6;CL:0000127,3.23e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.43e-21!50;UBERON:0006238!7.43e-21!50;UBERON:0001049!7.45e-21!52;UBERON:0005068!7.45e-21!52;UBERON:0006241!7.45e-21!52;UBERON:0007135!7.45e-21!52;UBERON:0002346!1.63e-20!71;UBERON:0003075!1.63e-20!71;UBERON:0007284!1.63e-20!71;UBERON:0002616!5.43e-20!49;UBERON:0000033!7.28e-20!63;UBERON:0001017!1.10e-18!73;UBERON:0005743!1.10e-18!73;UBERON:0004121!3.67e-18!102;UBERON:0000924!3.67e-18!102;UBERON:0006601!3.67e-18!102;UBERON:0000073!7.28e-18!75;UBERON:0001016!7.28e-18!75;UBERON:0002020!3.51e-15!34;UBERON:0003080!1.83e-14!40;UBERON:0002791!4.59e-14!29;UBERON:0003528!4.59e-14!29;UBERON:0001893!4.59e-14!29;UBERON:0002780!1.48e-13!39;UBERON:0001890!1.48e-13!39;UBERON:0006240!1.48e-13!39;UBERON:0004111!2.77e-13!122;UBERON:0000025!8.85e-13!114;UBERON:0007811!2.03e-12!86;UBERON:0003056!2.70e-12!49;UBERON:0000956!1.19e-11!21;UBERON:0001869!1.19e-11!21;UBERON:0000203!1.19e-11!21;UBERON:0002021!1.08e-10!10;UBERON:0000411!1.08e-10!10;UBERON:0001950!1.08e-10!10;UBERON:0000153!1.92e-10!94;UBERON:0000475!1.01e-09!200;UBERON:0002619!1.03e-09!17;UBERON:0000477!2.45e-08!154;UBERON:0000483!6.19e-08!181;UBERON:0000119!1.08e-07!183;UBERON:0003076!3.07e-07!12;UBERON:0003057!3.07e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.00e-12,21;UBERON:0001869,2.00e-12,21;UBERON:0000203,2.00e-12,21;UBERON:0002619,4.15e-12,17;UBERON:0002021,2.63e-11,10;UBERON:0000411,2.63e-11,10;UBERON:0001950,2.63e-11,10;UBERON:0003528,5.16e-11,29;UBERON:0002791,5.16e-11,29;UBERON:0001893,5.16e-11,29;UBERON:0002020,3.29e-09,34;UBERON:0002616,3.94e-08,46;UBERON:0000955,6.32e-08,47;UBERON:0006238,6.32e-08,47;UBERON:0002780,7.24e-08,39;UBERON:0001890,7.24e-08,39;UBERON:0006240,7.24e-08,39;UBERON:0003080,1.22e-07,40;UBERON:0001049,5.11e-07,52;UBERON:0005068,5.11e-07,52;UBERON:0006241,5.11e-07,52;UBERON:0007135,5.11e-07,52 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.09843091367236,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0,0,0,0.638436690425939,0.921639199537461,0,0.0914876436024097,0.52091337055676,0.837548997004143,0,0.916789486660861,0.589257170947335,0,0,0,0,0,0.860423876981386,2.03991400112325,1.07940638327563,0,1.79210754838934,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,3.26572705942614,0,0.304465478312141,0,0.301445281105245,0.23517741427141,1.88499886994513,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.748953197024114,1.37250180845588,0,1.04294592115366,1.27857728665165,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,1.77871576252289,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,1.71853182343688,0.685082519770642,0.755393897389701,0,1.80128481289688,3.62513927187364,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.09843091367236,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0,0,0,0.638436690425939,0.921639199537461,0,0.0914876436024097,0.52091337055676,0.837548997004143,0,0.916789486660861,0.589257170947335,0,0,0,0,0,0.860423876981386,2.03991400112325,1.07940638327563,0,1.79210754838934,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,3.26572705942614,0,0.304465478312141,0,0.301445281105245,0.23517741427141,1.88499886994513,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.748953197024114,1.37250180845588,0,1.04294592115366,1.27857728665165,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,1.77871576252289,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,1.71853182343688,0.685082519770642,0.755393897389701,0,1.80128481289688,3.62513927187364,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | ||
|short_description=p19@Kcnn2 | |||
}} | }} |
Latest revision as of 07:35, 27 September 2015
Short description: | p19@Kcnn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Kcnn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3142 |
Association with transcript: | -337bp_to_ENSMUST00000167895, ENSMUST00000169783, NM_080465_5end |
EntrezGene: | Kcnn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.20e-08 | 5 |
oligodendrocyte | 3.23e-07 | 6 |
macroglial cell | 3.23e-07 | 6 |
astrocyte | 3.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.00e-12 | 21 |
cerebral hemisphere | 2.00e-12 | 21 |
pallium | 2.00e-12 | 21 |
regional part of cerebral cortex | 4.15e-12 | 17 |
occipital lobe | 2.63e-11 | 10 |
visual cortex | 2.63e-11 | 10 |
neocortex | 2.63e-11 | 10 |
brain grey matter | 5.16e-11 | 29 |
regional part of telencephalon | 5.16e-11 | 29 |
telencephalon | 5.16e-11 | 29 |
gray matter | 3.29e-09 | 34 |
regional part of brain | 3.94e-08 | 46 |
brain | 6.32e-08 | 47 |
future brain | 6.32e-08 | 47 |
regional part of forebrain | 7.24e-08 | 39 |
forebrain | 7.24e-08 | 39 |
future forebrain | 7.24e-08 | 39 |
anterior neural tube | 1.22e-07 | 40 |
neural tube | 5.11e-07 | 52 |
neural rod | 5.11e-07 | 52 |
future spinal cord | 5.11e-07 | 52 |
neural keel | 5.11e-07 | 52 |