FFCP PHASE1:Mm9::chr17:46692970..46692977,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:46692970..46692977,- to FFCP PHASE1:Mm9::chr17:46692970..46692977,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20807 | |EntrezGene=20807 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9JM73 | |UniProt=Q9JM73 | ||
|association_with_transcript=133bp_to_ENSMUST00000015749,NM_020493,uc008ctg.1_5end | |||
|cluster_id=chr17:46692970..46692977,- | |||
|description=CAGE_peak_5_at_Srf_5end | |||
|id=chr17:46692970..46692977,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.01e-09!23;UBERON:0001009!1.01e-09!23;UBERON:0007100!3.50e-09!18;UBERON:0000948!3.50e-09!18;UBERON:0005498!3.50e-09!18;UBERON:0004140!3.50e-09!18;UBERON:0009881!3.50e-09!18;UBERON:0004141!3.50e-09!18;UBERON:0003084!3.50e-09!18;UBERON:0007005!3.50e-09!18;UBERON:0004139!3.50e-09!18;UBERON:0004291!3.50e-09!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.81e-17,23;UBERON:0001009,2.81e-17,23;UBERON:0007100,6.12e-17,18;UBERON:0000948,6.12e-17,18;UBERON:0005498,6.12e-17,18;UBERON:0004140,6.12e-17,18;UBERON:0009881,6.12e-17,18;UBERON:0004141,6.12e-17,18;UBERON:0003084,6.12e-17,18;UBERON:0007005,6.12e-17,18;UBERON:0004139,6.12e-17,18;UBERON:0004291,6.12e-17,18;UBERON:0004872,4.79e-11,33;UBERON:0003103,5.47e-08,43;UBERON:0003914,7.96e-07,47 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.16787927191189,1.40167584357315,0.645616617207881,0.281577444303333,0.70219357896598,0.171217968225505,0.319088635981346,0.171200729931206,0.174840804837995,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0.510259740906419,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,1.00812051903972,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,1.62203089951223,0.734187008646726,3.12956537739216,0.436050312760893,0.878744730937887,1.1665793944457,0.979904951377538,0,0.671130424230945,0.725362142011344,0,1.02903774414379,0,1.54701627683233,0.404632921719196,0.528990979272033,0.633831403506179,2.03306719241479,1.77858959222228,0,0,2.1314403448383,0.898800331555214,1.92109152660777,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.191690942036473,0,0,0.510749352340751,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0.61119299110724,0.294628585473668,0,0.186399445825301,0.454357159999104,0.604572480854284,0,0,0.679971333707751,0.539703191637817,0,0,1.40444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.502666365318702,0.494389935468748,0.86759614151947,0.884610551949874,1.45590164952668,0.883366073841574,0.969750506270444,0,0.292780797011547,0.209446706813455,0.510914110417183,0.359445373517761,0,0.254140454146129,0.599162557619291,0.915001205637253,0,0.695297280769106,0.767146371990992,0.83115217823824,0.486723789203273,0.407357455401265,0.497627882440372,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0.360124259610698,0,0.612328492361951,0.512454881139399,0.562210347358373,0,0.646703978798527,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0.568326998791185,1.24275463521301,0.703578179943289,0.900310307305074,1.18372367792605,0.983821158737019,1.07986979021165,0.930135779001631,0.804820204198858,2.21854150497622,2.63295759861569,1.97000956894914,1.94565142910054,4.09359964790931,5.92785311285837,4.69722465661301,0.210289948564127,0.411618449517138,0,0.528901133327089,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0.610953983535943,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0.312037673114561,0,0.538192240565737,0,0.554259570499814,0.189491411770485,0.325929952884052,0.848725428875941,0.469380496577004,0.167506257441816,0.476087281772027,0.975668239288994,1.10344600874334,0.221464689648775,1.11618338060241,0,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.963303539926752,0.234423373184406,1.14754461763673,3.28212205365685,0,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0.849229592366497,0,0,0.790575555893047,0.321321316421807,0.99358059645788,0.178065603667255,0.651547837414304,0.824850614862677,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,0,0.36012218806262,0.258717367565509,0.214337035031592,0.886701168211368,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0.482503399425247,0.238744688006273,0,0.582961673259701,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.683471138605126,0.228778173206523,0,0.279902904647316,0.552799895217695,0.954670618015114,0.790839983952838,0.609958401380546,0.324016022465404,0.418176592028937,0,0.539457385539283,0.991841468704031,1.30877970992015,0.777689839750757,0,0,0.448549638131936,0.496375471371293,0,0,0.168956125490778,0.58678619322877,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0,0.358053391334963,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.906921534460845,0.221985953374065,0.358855426437903,0,2.70465431645067,0.750729901804728,0.915758121336325,1.07184189539533,2.00628841614145,0,0,0.572895513439397,0,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.31136204275253,1.19707462020309,0.341467211508268,0.972426868273176,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,1.26348605881899,0,0.754505365544305,0.842773567228942,0.768301828858431,0.918967503289812,0,0.811190281613988,0.964546102318525,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0,0.470546902076653,0.6769168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| |phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.16787927191189,1.40167584357315,0.645616617207881,0.281577444303333,0.70219357896598,0.171217968225505,0.319088635981346,0.171200729931206,0.174840804837995,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0.510259740906419,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,1.00812051903972,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,1.62203089951223,0.734187008646726,3.12956537739216,0.436050312760893,0.878744730937887,1.1665793944457,0.979904951377538,0,0.671130424230945,0.725362142011344,0,1.02903774414379,0,1.54701627683233,0.404632921719196,0.528990979272033,0.633831403506179,2.03306719241479,1.77858959222228,0,0,2.1314403448383,0.898800331555214,1.92109152660777,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.191690942036473,0,0,0.510749352340751,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0.61119299110724,0.294628585473668,0,0.186399445825301,0.454357159999104,0.604572480854284,0,0,0.679971333707751,0.539703191637817,0,0,1.40444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.502666365318702,0.494389935468748,0.86759614151947,0.884610551949874,1.45590164952668,0.883366073841574,0.969750506270444,0,0.292780797011547,0.209446706813455,0.510914110417183,0.359445373517761,0,0.254140454146129,0.599162557619291,0.915001205637253,0,0.695297280769106,0.767146371990992,0.83115217823824,0.486723789203273,0.407357455401265,0.497627882440372,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0.360124259610698,0,0.612328492361951,0.512454881139399,0.562210347358373,0,0.646703978798527,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0.568326998791185,1.24275463521301,0.703578179943289,0.900310307305074,1.18372367792605,0.983821158737019,1.07986979021165,0.930135779001631,0.804820204198858,2.21854150497622,2.63295759861569,1.97000956894914,1.94565142910054,4.09359964790931,5.92785311285837,4.69722465661301,0.210289948564127,0.411618449517138,0,0.528901133327089,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0.610953983535943,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0.312037673114561,0,0.538192240565737,0,0.554259570499814,0.189491411770485,0.325929952884052,0.848725428875941,0.469380496577004,0.167506257441816,0.476087281772027,0.975668239288994,1.10344600874334,0.221464689648775,1.11618338060241,0,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.963303539926752,0.234423373184406,1.14754461763673,3.28212205365685,0,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0.849229592366497,0,0,0.790575555893047,0.321321316421807,0.99358059645788,0.178065603667255,0.651547837414304,0.824850614862677,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,0,0.36012218806262,0.258717367565509,0.214337035031592,0.886701168211368,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0.482503399425247,0.238744688006273,0,0.582961673259701,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.683471138605126,0.228778173206523,0,0.279902904647316,0.552799895217695,0.954670618015114,0.790839983952838,0.609958401380546,0.324016022465404,0.418176592028937,0,0.539457385539283,0.991841468704031,1.30877970992015,0.777689839750757,0,0,0.448549638131936,0.496375471371293,0,0,0.168956125490778,0.58678619322877,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0,0.358053391334963,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.906921534460845,0.221985953374065,0.358855426437903,0,2.70465431645067,0.750729901804728,0.915758121336325,1.07184189539533,2.00628841614145,0,0,0.572895513439397,0,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.31136204275253,1.19707462020309,0.341467211508268,0.972426868273176,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,1.26348605881899,0,0.754505365544305,0.842773567228942,0.768301828858431,0.918967503289812,0,0.811190281613988,0.964546102318525,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0,0.470546902076653,0.6769168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| ||
|short_description=p5@Srf | |||
}} | }} |
Latest revision as of 13:41, 26 September 2015
Short description: | p5@Srf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Srf_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENSMUST00000015749, NM_020493, uc008ctg.1_5end |
EntrezGene: | Srf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.81e-17 | 23 |
circulatory system | 2.81e-17 | 23 |
primary circulatory organ | 6.12e-17 | 18 |
heart | 6.12e-17 | 18 |
primitive heart tube | 6.12e-17 | 18 |
primary heart field | 6.12e-17 | 18 |
anterior lateral plate mesoderm | 6.12e-17 | 18 |
heart tube | 6.12e-17 | 18 |
heart primordium | 6.12e-17 | 18 |
cardiac mesoderm | 6.12e-17 | 18 |
cardiogenic plate | 6.12e-17 | 18 |
heart rudiment | 6.12e-17 | 18 |
splanchnic layer of lateral plate mesoderm | 4.79e-11 | 33 |
compound organ | 5.47e-08 | 43 |
epithelial tube | 7.96e-07 | 47 |