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FFCP PHASE1:Mm9::chr17:37183039..37183080,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:37183039..37183080,+
|DHSsupport=NA
|short_description=p3@Gabbr1
|DPIdataset=NA
|description=CAGE_peak_3_at_Gabbr1_5end
|association_with_transcript=-63bp_to_ENSMUST00000174826_5end
|EntrezGene=54393
|EntrezGene=54393
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-63bp_to_ENSMUST00000174826_5end
|cluster_id=chr17:37183039..37183080,+
|description=CAGE_peak_3_at_Gabbr1_5end
|id=chr17:37183039..37183080,+
|ontology_enrichment_celltype=CL:0000221!1.13e-13!44;CL:0000133!1.13e-13!44;CL:0000117!1.42e-13!23;CL:0000337!1.42e-13!23;CL:0002319!2.82e-13!43;CL:0000540!4.91e-11!33;CL:0000047!4.91e-11!33;CL:0000031!4.91e-11!33;CL:0000404!4.91e-11!33;CL:0000055!3.81e-10!50;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-18,23;CL:0000337,3.69e-18,23;CL:0000221,1.74e-16,44;CL:0000133,1.74e-16,44;CL:0002319,6.00e-16,43;CL:0000540,1.99e-14,33;CL:0000047,1.99e-14,33;CL:0000031,1.99e-14,33;CL:0000404,1.99e-14,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.11e-29!73;UBERON:0005743!1.11e-29!73;UBERON:0000073!2.26e-29!75;UBERON:0001016!2.26e-29!75;UBERON:0004121!6.12e-26!102;UBERON:0000924!6.12e-26!102;UBERON:0006601!6.12e-26!102;UBERON:0001049!1.47e-25!52;UBERON:0005068!1.47e-25!52;UBERON:0006241!1.47e-25!52;UBERON:0007135!1.47e-25!52;UBERON:0000955!6.38e-24!50;UBERON:0006238!6.38e-24!50;UBERON:0000033!1.41e-23!63;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0002616!3.18e-23!49;UBERON:0002020!5.13e-20!34;UBERON:0003056!2.81e-19!49;UBERON:0003080!5.52e-19!40;UBERON:0002780!2.12e-18!39;UBERON:0001890!2.12e-18!39;UBERON:0006240!2.12e-18!39;UBERON:0002791!1.61e-16!29;UBERON:0003528!1.61e-16!29;UBERON:0001893!1.61e-16!29;UBERON:0007811!2.04e-14!86;UBERON:0000153!2.25e-14!94;UBERON:0000956!1.70e-11!21;UBERON:0001869!1.70e-11!21;UBERON:0000203!1.70e-11!21;UBERON:0002619!7.75e-10!17;UBERON:0000025!2.78e-07!114;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12;UBERON:0002021!4.72e-07!10;UBERON:0000411!4.72e-07!10;UBERON:0001950!4.72e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.85e-37,73;UBERON:0001016,2.88e-35,75;UBERON:0000073,3.58e-33,54;UBERON:0001049,2.51e-31,52;UBERON:0005068,2.51e-31,52;UBERON:0006241,2.51e-31,52;UBERON:0007135,2.51e-31,52;UBERON:0004121,3.91e-30,95;UBERON:0000924,3.91e-30,95;UBERON:0006601,3.91e-30,95;UBERON:0002346,1.17e-29,64;UBERON:0003075,1.17e-29,64;UBERON:0007284,1.17e-29,64;UBERON:0002020,4.43e-27,34;UBERON:0000955,1.80e-26,47;UBERON:0006238,1.80e-26,47;UBERON:0010371,9.89e-26,73;UBERON:0002616,1.49e-25,46;UBERON:0003080,5.59e-23,40;UBERON:0003528,3.09e-22,29;UBERON:0002791,3.09e-22,29;UBERON:0001893,3.09e-22,29;UBERON:0002780,3.46e-22,39;UBERON:0001890,3.46e-22,39;UBERON:0006240,3.46e-22,39;UBERON:0003056,7.40e-22,49;UBERON:0010314,2.48e-17,92;UBERON:0000956,2.76e-15,21;UBERON:0001869,2.76e-15,21;UBERON:0000203,2.76e-15,21;UBERON:0002619,5.39e-13,17;UBERON:0002021,3.72e-09,10;UBERON:0000411,3.72e-09,10;UBERON:0001950,3.72e-09,10;UBERON:0003076,1.21e-08,12;UBERON:0003057,1.21e-08,12;UBERON:0002420,3.91e-08,8;UBERON:0007245,3.91e-08,8;UBERON:0010009,3.91e-08,8;UBERON:0010011,3.91e-08,8;UBERON:0000454,3.91e-08,8;UBERON:0000025,1.12e-07,114;UBERON:0004111,1.62e-07,122;UBERON:0002240,8.78e-07,6;UBERON:0005174,8.78e-07,6;UBERON:0001137,8.78e-07,6
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5893,10.3552062350364,0.518936737920883,0.399024873401031,1.53660245178721,2.91728060481953,0.419226325255965,1.47074806760011,2.00022055021454,2.06035057238894,0.962757628775446,2.02157769411038,1.77435509923168,1.32038438970253,2.80924522409647,2.30490548657529,2.23998328926892,2.38146845641537,2.20180219295225,3.27945674788299,1.64834360321323,1.76638704161277,2.40008476669791,1.06485483695602,1.1921809497366,1.74415699958794,1.69396884747595,1.77690676572521,1.28049581010941,1.8414879800649,1.35804113845862,0.561142271657738,2.01679530811096,2.26560309463796,1.63692417267876,2.16911577660352,1.92906610981141,1.99848462350357,2.33931608445408,3.00819475667618,2.10417165275728,0.441182838239031,0.695603506861264
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0.563154888606667,0.70219357896598,0.171217968225505,0.0797721589953364,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0,0.42438965179803,2.89147186513637,0.0992909512008853,0,0.319984845586813,0.45881856213434,1.72269589234506,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0.683045484958446,1.45653105909346,0.377690453926732,0.811015449756117,0.367093504323363,3.12956537739216,0.65407546914134,4.17403747195497,2.91644848611425,1.67983705950435,4.31257693094915,0.167782606057736,0,0.672187598284928,0.257259436035947,0.286533439938757,0.515672092277442,8.49729135610311,12.6957835025288,9.50747105259269,0.338844532069132,4.4464739805557,0,0,0,2.09720077362883,3.45796474789399,2.07379224616955,2.70011876663381,2.52389953621658,20.5668708770739,21.6451170132581,2.44981598429908,5.46319184803947,1.83843757322004,12.1127469099328,11.7472351038373,10.752457327937,9.75958529203434,14.1805847583735,11.4600941522487,9.49222196604695,18.5711661310454,14.9742282821274,14.142172102736,17.5117167382897,10.8111678578674,0.530083353332288,0.982430281388212,0.869593466105033,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,2.53518155598025,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.68510327831436,0.517875767294343,0.445326417194474,0.346970653532272,0.608930956624282,1.38369298353635,0.452167921657868,0.940709657085638,0.628332956648377,2.22475470960936,0.578397427679647,0.884610551949874,0.323533699894818,0.220841518460394,0,0,7.02673912827713,8.58731497935166,0.255457055208591,0.11981512450592,0,0,10.3355541189328,15.0975198930147,12.942398267625,15.1227158567281,16.1100738118108,10.8049783170971,10.058958310201,0.81471491080253,0.497627882440372,0.758168275301024,0.631325567659422,0.780722657776222,1.37941262660084,1.26043490863744,0.753524089178575,2.38127747029647,1.40925092313335,1.96773621575431,1.03481348295606,0.646703978798527,0.945530400839096,0.879755620819744,0.876782929710299,1.66828349535359,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,1.65721314909647,0.590292695242212,0.308534225774757,0.930135779001631,0.804820204198858,0.583826711835847,0.329119699826961,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,11.3556572224629,5.24813523134351,0,0.264450566663544,0.639864751605702,1.16118335930219,1.67527699718721,1.4117846723634,0.889512175379481,0.760902504450237,0,0.164698954724011,0.502670417600539,0.397912944082302,0.974820435595601,0.898819408654221,0.864552199498777,0.398282546508734,0.379335801906163,0.456994050438915,0,0,0.775809948670503,1.19230893813542,0.632365371242573,0.442830443938806,0.470996183524124,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0.369506380333209,1.32643988239339,0.651859905768103,0.509235257325564,0.704070744865506,1.34005005953453,0.952174563544055,1.95133647857799,0.630540576424764,2.43611158613652,1.75400245523236,0.491589944147214,0.863424909329478,1.3018415272336,0,0,0.491764273019036,0.827810238914197,8.0275294993896,7.85318300167761,0.491804836130026,0.252470927204373,0.315508219416257,1.17131623288992,1.29254038639679,0.238968797952552,0.222798674082394,2.26461224631066,0.404810701674894,1.16902343164525,0.790575555893047,12.8528526568723,1.41940085208269,0.35613120733451,0.81443479676788,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,1.36175842301515,0.900305470156551,0.905510786479282,0.857348140126369,1.41872186913819,1.42695054081656,2.30368628842969,3.34911444026059,0,0.21183207086382,0,0.8244312647074,0.484393280087717,0.603129249281559,0.238744688006273,0,0,11.3109434226411,0.170870880797853,0.619160603889667,0.740778109478847,0,0.27338845544205,0.228778173206523,0.849892149969277,0.419854356970974,0.552799895217695,0,0.632671987162271,1.62655573701479,0.972048067396211,1.04544148007234,0.655087691238533,0.404593039154462,1.32245529160537,0.26175594198403,0.388844919875379,0,0,0.448549638131936,0.496375471371293,0.777804753376191,0.387479470433193,0.844780627453891,1.05621514781179,1.3020438484395,0.314578033277133,0,0.288030006257865,0.632022241256357,0.608175645870493,0.308132871494482,0,0.179026695667481,0.79472541912506,0.600977247599844,0.147689527174577,0.201932899896295,0.685861259894999,0.604957110821043,0.487289403698762,0.865906574762965,0.818138315270983,0.453460767230423,0.443971906748129,0.538283139656854,0.503653849092235,1.35232715822533,0.563047426353546,0.36630324853453,0,0,11.8597886949584,7.82552902062201,10.3121192419091,9.28007184655913,10.2762377965596,14.3524840504043,16.2005400055633,11.2580300806055,11.7817026335893,10.3552062350364,0.518936737920883,0.399024873401031,1.53660245178721,2.91728060481953,0.419226325255965,1.47074806760011,2.00022055021454,2.06035057238894,0.962757628775446,2.02157769411038,1.77435509923168,1.32038438970253,2.80924522409647,2.30490548657529,2.23998328926892,2.38146845641537,2.20180219295225,3.27945674788299,1.64834360321323,1.76638704161277,2.40008476669791,1.06485483695602,1.1921809497366,1.74415699958794,1.69396884747595,1.77690676572521,1.28049581010941,1.8414879800649,1.35804113845862,0.561142271657738,2.01679530811096,2.26560309463796,1.63692417267876,2.16911577660352,1.92906610981141,1.99848462350357,2.33931608445408,3.00819475667618,2.10417165275728,0.441182838239031,0.695603506861264
|short_description=p3@Gabbr1
}}
}}

Latest revision as of 11:30, 26 September 2015

Short description:p3@Gabbr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gabbr1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -63bp_to_ENSMUST00000174826_5end
EntrezGene:Gabbr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gabbr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.81
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F112.94
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A37.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C911.31
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.69e-1823
neuroblast (sensu Vertebrata)3.69e-1823
ectodermal cell1.74e-1644
neurectodermal cell1.74e-1644
neural cell6.00e-1643
neuron1.99e-1433
neuronal stem cell1.99e-1433
neuroblast1.99e-1433
electrically signaling cell1.99e-1433
electrically responsive cell1.42e-1039
electrically active cell1.42e-1039

Uber anatomy
Ontology termp-valuen
central nervous system5.85e-3773
nervous system2.88e-3575
regional part of nervous system3.58e-3354
neural tube2.51e-3152
neural rod2.51e-3152
future spinal cord2.51e-3152
neural keel2.51e-3152
ectoderm-derived structure3.91e-3095
ectoderm3.91e-3095
presumptive ectoderm3.91e-3095
neurectoderm1.17e-2964
neural plate1.17e-2964
presumptive neural plate1.17e-2964
gray matter4.43e-2734
brain1.80e-2647
future brain1.80e-2647
ecto-epithelium9.89e-2673
regional part of brain1.49e-2546
anterior neural tube5.59e-2340
brain grey matter3.09e-2229
regional part of telencephalon3.09e-2229
telencephalon3.09e-2229
regional part of forebrain3.46e-2239
forebrain3.46e-2239
future forebrain3.46e-2239
pre-chordal neural plate7.40e-2249
structure with developmental contribution from neural crest2.48e-1792
cerebral cortex2.76e-1521
cerebral hemisphere2.76e-1521
pallium2.76e-1521
regional part of cerebral cortex5.39e-1317
occipital lobe3.72e-0910
visual cortex3.72e-0910
neocortex3.72e-0910
posterior neural tube1.21e-0812
chordal neural plate1.21e-0812
basal ganglion3.91e-088
nuclear complex of neuraxis3.91e-088
aggregate regional part of brain3.91e-088
collection of basal ganglia3.91e-088
cerebral subcortex3.91e-088
tube1.12e-07114
anatomical conduit1.62e-07122
spinal cord8.78e-076
dorsal region element8.78e-076
dorsum8.78e-076
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