FFCP PHASE1:Mm9::chr17:26389932..26389941,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:26389932..26389941,+ to FFCP PHASE1:Mm9::chr17:26389932..26389941,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66978 | |EntrezGene=66978 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D6RGP6 | |UniProt=D6RGP6 | ||
|association_with_transcript=-2bp_to_ENSMUST00000148894_5end | |||
|cluster_id=chr17:26389932..26389941,+ | |||
|description=CAGE_peak_2_at_Luc7l_5end | |||
|id=chr17:26389932..26389941,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.81e-09!23;CL:0000337!2.81e-09!23;CL:0000540!6.03e-09!33;CL:0000047!6.03e-09!33;CL:0000031!6.03e-09!33;CL:0000404!6.03e-09!33;CL:0000393!2.30e-07!39;CL:0000211!2.30e-07!39;CL:0000221!6.84e-07!44;CL:0000133!6.84e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.99e-13,23;CL:0000337,9.99e-13,23;CL:0000540,1.06e-11,33;CL:0000047,1.06e-11,33;CL:0000031,1.06e-11,33;CL:0000404,1.06e-11,33;CL:0000393,8.80e-10,39;CL:0000211,8.80e-10,39;CL:0000221,9.93e-09,44;CL:0000133,9.93e-09,44;CL:0002319,2.63e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.85e-12!73;UBERON:0005743!7.85e-12!73;UBERON:0000073!5.26e-11!75;UBERON:0001016!5.26e-11!75;UBERON:0004121!1.03e-10!102;UBERON:0000924!1.03e-10!102;UBERON:0006601!1.03e-10!102;UBERON:0000033!1.09e-10!63;UBERON:0000955!8.27e-09!50;UBERON:0006238!8.27e-09!50;UBERON:0001049!9.17e-09!52;UBERON:0005068!9.17e-09!52;UBERON:0006241!9.17e-09!52;UBERON:0007135!9.17e-09!52;UBERON:0002346!1.30e-08!71;UBERON:0003075!1.30e-08!71;UBERON:0007284!1.30e-08!71;UBERON:0002020!1.77e-08!34;UBERON:0002616!2.53e-08!49;UBERON:0003056!3.21e-08!49;UBERON:0003080!2.14e-07!40;UBERON:0002780!4.25e-07!39;UBERON:0001890!4.25e-07!39;UBERON:0006240!4.25e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.36e-12,73;UBERON:0001016,3.48e-11,75;UBERON:0004121,2.55e-10,95;UBERON:0000924,2.55e-10,95;UBERON:0006601,2.55e-10,95;UBERON:0000073,6.10e-10,54;UBERON:0002020,3.36e-09,34;UBERON:0002346,3.77e-08,64;UBERON:0003075,3.77e-08,64;UBERON:0007284,3.77e-08,64;UBERON:0001049,7.19e-08,52;UBERON:0005068,7.19e-08,52;UBERON:0006241,7.19e-08,52;UBERON:0007135,7.19e-08,52;UBERON:0010371,6.46e-07,73;UBERON:0003528,8.03e-07,29;UBERON:0002791,8.03e-07,29;UBERON:0001893,8.03e-07,29;UBERON:0003056,8.13e-07,49 | |||
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| ||
|short_description=p2@Luc7l | |||
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Latest revision as of 02:55, 26 September 2015
Short description: | p2@Luc7l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Luc7l_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENSMUST00000148894_5end |
EntrezGene: | Luc7l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.99e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.99e-13 | 23 |
neuron | 1.06e-11 | 33 |
neuronal stem cell | 1.06e-11 | 33 |
neuroblast | 1.06e-11 | 33 |
electrically signaling cell | 1.06e-11 | 33 |
electrically responsive cell | 8.80e-10 | 39 |
electrically active cell | 8.80e-10 | 39 |
ectodermal cell | 9.93e-09 | 44 |
neurectodermal cell | 9.93e-09 | 44 |
neural cell | 2.63e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.36e-12 | 73 |
nervous system | 3.48e-11 | 75 |
ectoderm-derived structure | 2.55e-10 | 95 |
ectoderm | 2.55e-10 | 95 |
presumptive ectoderm | 2.55e-10 | 95 |
regional part of nervous system | 6.10e-10 | 54 |
gray matter | 3.36e-09 | 34 |
neurectoderm | 3.77e-08 | 64 |
neural plate | 3.77e-08 | 64 |
presumptive neural plate | 3.77e-08 | 64 |
neural tube | 7.19e-08 | 52 |
neural rod | 7.19e-08 | 52 |
future spinal cord | 7.19e-08 | 52 |
neural keel | 7.19e-08 | 52 |
ecto-epithelium | 6.46e-07 | 73 |
brain grey matter | 8.03e-07 | 29 |
regional part of telencephalon | 8.03e-07 | 29 |
telencephalon | 8.03e-07 | 29 |
pre-chordal neural plate | 8.13e-07 | 49 |