FFCP PHASE1:Mm9::chr17:24826846..24826905,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:24826846..24826905,- to FFCP PHASE1:Mm9::chr17:24826846..24826905,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20974 | |EntrezGene=20974 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R191 | |UniProt=Q8R191 | ||
|association_with_transcript=0bp_to_ENSMUST00000007236,NM_011522,uc008axq.1_5end | |||
|cluster_id=chr17:24826846..24826905,- | |||
|description=CAGE_peak_1_at_Syngr3_5end | |||
|id=chr17:24826846..24826905,- | |||
|ontology_enrichment_celltype=CL:0000221!3.59e-16!44;CL:0000133!3.59e-16!44;CL:0002319!4.05e-16!43;CL:0000540!7.01e-16!33;CL:0000047!7.01e-16!33;CL:0000031!7.01e-16!33;CL:0000404!7.01e-16!33;CL:0000117!7.87e-14!23;CL:0000337!7.87e-14!23;CL:0000055!6.42e-12!50;CL:0000393!7.43e-12!39;CL:0000211!7.43e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.03e-18,33;CL:0000047,4.03e-18,33;CL:0000031,4.03e-18,33;CL:0000404,4.03e-18,33;CL:0000221,6.75e-18,44;CL:0000133,6.75e-18,44;CL:0002319,7.86e-18,43;CL:0000117,9.51e-16,23;CL:0000337,9.51e-16,23;CL:0000393,5.80e-13,39;CL:0000211,5.80e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.89e-32!75;UBERON:0001016!5.89e-32!75;UBERON:0001017!9.45e-32!73;UBERON:0005743!9.45e-32!73;UBERON:0004121!1.16e-30!102;UBERON:0000924!1.16e-30!102;UBERON:0006601!1.16e-30!102;UBERON:0002346!4.76e-27!71;UBERON:0003075!4.76e-27!71;UBERON:0007284!4.76e-27!71;UBERON:0001049!2.21e-23!52;UBERON:0005068!2.21e-23!52;UBERON:0006241!2.21e-23!52;UBERON:0007135!2.21e-23!52;UBERON:0000033!5.89e-23!63;UBERON:0000955!2.54e-22!50;UBERON:0006238!2.54e-22!50;UBERON:0002616!1.03e-21!49;UBERON:0002020!8.12e-20!34;UBERON:0003056!6.45e-19!49;UBERON:0003080!7.79e-18!40;UBERON:0002780!3.81e-17!39;UBERON:0001890!3.81e-17!39;UBERON:0006240!3.81e-17!39;UBERON:0002791!8.82e-17!29;UBERON:0003528!8.82e-17!29;UBERON:0001893!8.82e-17!29;UBERON:0000956!6.96e-12!21;UBERON:0001869!6.96e-12!21;UBERON:0000203!6.96e-12!21;UBERON:0002619!6.27e-10!17;UBERON:0007811!1.11e-09!86;UBERON:0000153!3.47e-09!94;UBERON:0002021!7.30e-08!10;UBERON:0000411!7.30e-08!10;UBERON:0001950!7.30e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.58e-35,75;UBERON:0001017,1.53e-34,73;UBERON:0004121,9.95e-29,95;UBERON:0000924,9.95e-29,95;UBERON:0006601,9.95e-29,95;UBERON:0002346,2.25e-27,64;UBERON:0003075,2.25e-27,64;UBERON:0007284,2.25e-27,64;UBERON:0000073,1.19e-26,54;UBERON:0001049,6.62e-25,52;UBERON:0005068,6.62e-25,52;UBERON:0006241,6.62e-25,52;UBERON:0007135,6.62e-25,52;UBERON:0002020,1.12e-22,34;UBERON:0010371,3.53e-22,73;UBERON:0000955,2.46e-21,47;UBERON:0006238,2.46e-21,47;UBERON:0002616,1.16e-20,46;UBERON:0003056,5.27e-20,49;UBERON:0003528,3.67e-19,29;UBERON:0002791,3.67e-19,29;UBERON:0001893,3.67e-19,29;UBERON:0003080,3.75e-19,40;UBERON:0002780,2.29e-18,39;UBERON:0001890,2.29e-18,39;UBERON:0006240,2.29e-18,39;UBERON:0010314,7.13e-17,92;UBERON:0000956,1.70e-13,21;UBERON:0001869,1.70e-13,21;UBERON:0000203,1.70e-13,21;UBERON:0002619,3.08e-11,17;UBERON:0002021,7.51e-09,10;UBERON:0000411,7.51e-09,10;UBERON:0001950,7.51e-09,10;UBERON:0002420,6.98e-07,8;UBERON:0007245,6.98e-07,8;UBERON:0010009,6.98e-07,8;UBERON:0010011,6.98e-07,8;UBERON:0000454,6.98e-07,8 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0,0,0,0,0,0,23.8971645324506,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,1.74420125104357,2.41654801007919,3.69416808241138,1.25987779462826,4.31257693094915,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,60.6949382578793,83.5805747249812,64.6508031576303,1.35537812827653,0.889294796111139,0,0.988866362566974,0,8.38880309451533,17.28982373947,18.456750990909,23.3560273313825,19.5602214056785,141.96853924869,122.140303146242,26.8254850280749,25.3990498198326,18.3843757322004,151.959915779156,127.176588732847,147.769484992506,70.2953913601933,76.5751576952169,52.091337055676,156.342479440773,164.889444739282,184.42748506661,112.548119650941,99.517804878573,65.9854038221564,1.66597625333005,8.23730005163962,0,0,0,0,0.649776417447669,0,7.3031098468511,0.170430322578058,0.259786004602869,0.35333957451034,3.66192891419369,0,0,0,0,0,0.505524445014783,2.96878087269556,0,3.26572705942614,5.03107447621794,8.52503339273995,7.37969591219387,9.04335843315735,5.76184664964954,1.25666591329675,0.247194967734374,2.02439099687876,0,0,0.220841518460394,0,3.72783522436244,45.3810235367898,51.9427832897369,0.766371165625774,0,0,0,151.138755159466,130.387671803309,94.492072788874,148.967442404781,139.876355159691,160.41237039998,122.654394879225,0,0,0.252722758433675,2.94618598241064,0.520481771850815,6.43725892413724,4.32149111532838,4.37043971723574,5.57899293040888,8.45550553880009,8.71426038405478,15.0047955028629,2.15567992932842,3.40390944302075,2.11141348996739,0.876782929710299,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,122.599040012886,59.5817705676057,0,1.32225283331772,0.853153002140936,2.09013004674395,2.96395161040815,2.42020229548011,1.77902435075896,2.09248188723815,3.79623249235609,3.78807595865225,5.27803938480566,3.38226002469956,3.8992817423824,3.59527763461689,2.16138049874694,1.1948476395262,0.379335801906163,1.25673363870702,1.1270773567308,0.610953983535943,0.775809948670503,0.49095073923223,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0,0,0.837531287209079,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,114.633121251283,98.6922401106351,0.491804836130026,0,9.78075480190396,10.9322848403059,18.9572590004863,3.58453196928828,5.12436950389506,4.81230102341015,8.50102473517278,15.1973046113882,16.602086673754,94.7897883444331,0,0.890328018336276,0.325773918707152,0,1.32745138339963,0,0,0.377210159511796,1.18120757152309,1.53717573971964,0.775284879504663,0.363533729477506,0.712994756769443,2.21225730555071,0,0,0.680879211507576,1.98067203434441,0.905510786479282,1.28602221018955,1.59606210278046,3.92411398724555,7.0756078858912,6.39376393140658,0,0,7.71849393192367,0.49465875882444,0.322928853391811,0.361877549568935,0.716234064018819,0.328281799490123,3.78925087618806,85.6664895288555,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.790839983952838,2.03319467126849,1.62008011232702,1.04544148007234,2.83871332870031,2.15782954215713,4.05001933054146,1.04702376793612,1.16653475962614,0.621339313086926,0,0,0,1.36115831840833,1.80823752868824,0.844780627453891,0.58678619322877,0.39061315453185,0.314578033277133,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,3.99574716073316,5.56225910978749,1.84673078000486,4.25017106870819,0,0,0.857473516316263,1.00314420807073,171.684560155588,170.780662744163,181.607877760289,128.546180393078,128.11043119711,117.086054095404,137.029567547057,132.394433747921,117.363883926909,159.987936331312,1.03787347584177,3.59122386060928,7.34154504742777,7.05009479498053,6.70762120409543,6.06683577885047,13.1125569402953,14.8345241212004,13.1576875932644,12.6348605881899,11.1530891951705,11.3175804831646,9.45779225445812,13.0611310905933,11.0276100394777,11.4310485907938,13.6743504614929,11.9603716687497,11.5384052224926,8.53753736779504,11.3146853287187,9.40621772644489,9.29901140794552,9.30217066446903,8.37573485696442,12.6075765758598,8.78054269789308,10.2597187460759,10.3211126522855,10.1005608898393,10.0839765405548,9.45643030805409,11.867700251921,9.60608415352989,8.10207766120794,36.4723443789401,12.3983752476066,12.6773921888496,5.7386499620653,9.70602244125868,6.95603506861264 | |phase1_expression=3.36312578920067,0,0,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0,0,0,0,0,0,23.8971645324506,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,1.74420125104357,2.41654801007919,3.69416808241138,1.25987779462826,4.31257693094915,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,60.6949382578793,83.5805747249812,64.6508031576303,1.35537812827653,0.889294796111139,0,0.988866362566974,0,8.38880309451533,17.28982373947,18.456750990909,23.3560273313825,19.5602214056785,141.96853924869,122.140303146242,26.8254850280749,25.3990498198326,18.3843757322004,151.959915779156,127.176588732847,147.769484992506,70.2953913601933,76.5751576952169,52.091337055676,156.342479440773,164.889444739282,184.42748506661,112.548119650941,99.517804878573,65.9854038221564,1.66597625333005,8.23730005163962,0,0,0,0,0.649776417447669,0,7.3031098468511,0.170430322578058,0.259786004602869,0.35333957451034,3.66192891419369,0,0,0,0,0,0.505524445014783,2.96878087269556,0,3.26572705942614,5.03107447621794,8.52503339273995,7.37969591219387,9.04335843315735,5.76184664964954,1.25666591329675,0.247194967734374,2.02439099687876,0,0,0.220841518460394,0,3.72783522436244,45.3810235367898,51.9427832897369,0.766371165625774,0,0,0,151.138755159466,130.387671803309,94.492072788874,148.967442404781,139.876355159691,160.41237039998,122.654394879225,0,0,0.252722758433675,2.94618598241064,0.520481771850815,6.43725892413724,4.32149111532838,4.37043971723574,5.57899293040888,8.45550553880009,8.71426038405478,15.0047955028629,2.15567992932842,3.40390944302075,2.11141348996739,0.876782929710299,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,122.599040012886,59.5817705676057,0,1.32225283331772,0.853153002140936,2.09013004674395,2.96395161040815,2.42020229548011,1.77902435075896,2.09248188723815,3.79623249235609,3.78807595865225,5.27803938480566,3.38226002469956,3.8992817423824,3.59527763461689,2.16138049874694,1.1948476395262,0.379335801906163,1.25673363870702,1.1270773567308,0.610953983535943,0.775809948670503,0.49095073923223,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0,0,0.837531287209079,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,114.633121251283,98.6922401106351,0.491804836130026,0,9.78075480190396,10.9322848403059,18.9572590004863,3.58453196928828,5.12436950389506,4.81230102341015,8.50102473517278,15.1973046113882,16.602086673754,94.7897883444331,0,0.890328018336276,0.325773918707152,0,1.32745138339963,0,0,0.377210159511796,1.18120757152309,1.53717573971964,0.775284879504663,0.363533729477506,0.712994756769443,2.21225730555071,0,0,0.680879211507576,1.98067203434441,0.905510786479282,1.28602221018955,1.59606210278046,3.92411398724555,7.0756078858912,6.39376393140658,0,0,7.71849393192367,0.49465875882444,0.322928853391811,0.361877549568935,0.716234064018819,0.328281799490123,3.78925087618806,85.6664895288555,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.790839983952838,2.03319467126849,1.62008011232702,1.04544148007234,2.83871332870031,2.15782954215713,4.05001933054146,1.04702376793612,1.16653475962614,0.621339313086926,0,0,0,1.36115831840833,1.80823752868824,0.844780627453891,0.58678619322877,0.39061315453185,0.314578033277133,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,3.99574716073316,5.56225910978749,1.84673078000486,4.25017106870819,0,0,0.857473516316263,1.00314420807073,171.684560155588,170.780662744163,181.607877760289,128.546180393078,128.11043119711,117.086054095404,137.029567547057,132.394433747921,117.363883926909,159.987936331312,1.03787347584177,3.59122386060928,7.34154504742777,7.05009479498053,6.70762120409543,6.06683577885047,13.1125569402953,14.8345241212004,13.1576875932644,12.6348605881899,11.1530891951705,11.3175804831646,9.45779225445812,13.0611310905933,11.0276100394777,11.4310485907938,13.6743504614929,11.9603716687497,11.5384052224926,8.53753736779504,11.3146853287187,9.40621772644489,9.29901140794552,9.30217066446903,8.37573485696442,12.6075765758598,8.78054269789308,10.2597187460759,10.3211126522855,10.1005608898393,10.0839765405548,9.45643030805409,11.867700251921,9.60608415352989,8.10207766120794,36.4723443789401,12.3983752476066,12.6773921888496,5.7386499620653,9.70602244125868,6.95603506861264 | ||
|short_description=p1@Syngr3 | |||
}} | }} |
Latest revision as of 01:43, 26 September 2015
Short description: | p1@Syngr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Syngr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000007236, NM_011522, uc008axq.1_5end |
EntrezGene: | Syngr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.03e-18 | 33 |
neuronal stem cell | 4.03e-18 | 33 |
neuroblast | 4.03e-18 | 33 |
electrically signaling cell | 4.03e-18 | 33 |
ectodermal cell | 6.75e-18 | 44 |
neurectodermal cell | 6.75e-18 | 44 |
neural cell | 7.86e-18 | 43 |
CNS neuron (sensu Vertebrata) | 9.51e-16 | 23 |
neuroblast (sensu Vertebrata) | 9.51e-16 | 23 |
electrically responsive cell | 5.80e-13 | 39 |
electrically active cell | 5.80e-13 | 39 |