FFCP PHASE1:Mm9::chr16:74412021..74412037,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:74412021..74412037,- to FFCP PHASE1:Mm9::chr16:74412021..74412037,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=268902 | |EntrezGene=268902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2159 | |||
|TSSclassifier=NA | |||
|UniProt=E9PYK2 | |UniProt=E9PYK2 | ||
|association_with_transcript=0bp_to_ENSMUST00000116586_5end | |||
|cluster_id=chr16:74412021..74412037,- | |||
|description=CAGE_peak_2_at_Robo2_5end | |||
|id=chr16:74412021..74412037,- | |||
|ontology_enrichment_celltype=CL:0000117!3.28e-10!23;CL:0000337!3.28e-10!23;CL:0000540!4.23e-09!33;CL:0000047!4.23e-09!33;CL:0000031!4.23e-09!33;CL:0000404!4.23e-09!33;CL:0000221!8.96e-07!44;CL:0000133!8.96e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-10,23;CL:0000337,1.35e-10,23;CL:0000540,1.96e-09,33;CL:0000047,1.96e-09,33;CL:0000031,1.96e-09,33;CL:0000404,1.96e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.40e-12!73;UBERON:0005743!1.40e-12!73;UBERON:0004121!1.49e-12!102;UBERON:0000924!1.49e-12!102;UBERON:0006601!1.49e-12!102;UBERON:0002020!2.43e-12!34;UBERON:0000073!3.32e-12!75;UBERON:0001016!3.32e-12!75;UBERON:0003056!7.36e-12!49;UBERON:0000468!7.97e-12!333;UBERON:0001049!1.28e-11!52;UBERON:0005068!1.28e-11!52;UBERON:0006241!1.28e-11!52;UBERON:0007135!1.28e-11!52;UBERON:0000033!1.29e-11!63;UBERON:0002346!3.55e-11!71;UBERON:0003075!3.55e-11!71;UBERON:0007284!3.55e-11!71;UBERON:0003080!8.67e-11!40;UBERON:0002780!1.12e-10!39;UBERON:0001890!1.12e-10!39;UBERON:0006240!1.12e-10!39;UBERON:0002791!5.18e-10!29;UBERON:0003528!5.18e-10!29;UBERON:0001893!5.18e-10!29;UBERON:0000955!5.85e-10!50;UBERON:0006238!5.85e-10!50;UBERON:0000922!1.84e-09!328;UBERON:0002616!2.05e-09!49;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0000479!3.68e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.02e-13,73;UBERON:0004121,4.45e-13,95;UBERON:0000924,4.45e-13,95;UBERON:0006601,4.45e-13,95;UBERON:0002020,1.01e-12,34;UBERON:0002346,1.65e-12,64;UBERON:0003075,1.65e-12,64;UBERON:0007284,1.65e-12,64;UBERON:0001017,1.82e-12,73;UBERON:0003056,5.25e-12,49;UBERON:0001016,5.85e-12,75;UBERON:0001049,1.15e-11,52;UBERON:0005068,1.15e-11,52;UBERON:0006241,1.15e-11,52;UBERON:0007135,1.15e-11,52;UBERON:0000073,1.30e-11,54;UBERON:0003080,4.10e-11,40;UBERON:0002780,5.37e-11,39;UBERON:0001890,5.37e-11,39;UBERON:0006240,5.37e-11,39;UBERON:0003528,2.70e-10,29;UBERON:0002791,2.70e-10,29;UBERON:0001893,2.70e-10,29;UBERON:0000955,7.10e-10,47;UBERON:0006238,7.10e-10,47;UBERON:0002616,2.61e-09,46;UBERON:0000922,6.51e-08,320;UBERON:0000956,7.00e-08,21;UBERON:0001869,7.00e-08,21;UBERON:0000203,7.00e-08,21;UBERON:0010314,8.61e-07,92 | |||
|phase1_expression=20.6592012765184,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,3.12956537739216,1.74420125104357,0.219686182734472,3.30530828426282,1.25987779462826,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,20.4339625468194,20.6306481916093,20.2826049121977,0.677689064138264,0,0,0,0,0.898800331555214,1.53687322128622,38.9872942279876,34.5615202129128,33.2313438935184,10.2834354385369,13.693849539,35.8898041699815,25.5907407618691,45.960939330501,4.40463523997555,4.08599481872601,5.37622866396852,22.9482140650537,17.1081893536506,19.7947080811569,3.62937898701795,5.06486349028512,5.50073691996516,26.8112012781038,23.2065839702538,22.5543329448614,0.37863096666592,4.38315048619356,1.15945795480671,5.16254326188832,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,9.57735254481427,0,0,0,0,0.506719730950197,0,1.1418387971906,3.10725460376606,1.63286352971307,3.29622120855658,1.82679286987285,1.15307748628029,2.11011696773672,1.76383060703557,0.628332956648377,0.494389935468748,0,0,2.58826959915855,1.76673214768315,0.969750506270444,1.86391761218122,0.292780797011547,0.628340120440365,1.02182822083437,0,0,0,6.5907881338122,11.8950156732843,28.9005009859588,9.21268897019065,10.2286182932132,3.94797284663164,6.65189178577806,4.3790926455636,2.36373244159177,0.252722758433675,0.631325567659422,3.77349284591841,6.43725892413724,10.803727788321,11.1521565198429,12.858898339601,11.0177799444971,15.554486276915,4.9153640440413,10.993967639575,22.1254113796349,18.1229657888867,10.9597866213787,20.019401944243,25.074155989596,24.0765099597294,6.76716507182877,0,0,0,4.97101854085205,7.27030785941398,2.70093092191522,2.60419209143731,2.16440654922144,1.69693824176116,0.697601834251224,0.804820204198858,0.467061369468678,0.658239399653922,0,0.324275238183423,0.146199987425332,0,0.268412837520744,5.88811855979556,7.20332286654991,0.330418782983798,0.528901133327089,5.54549451391608,4.64473343720877,6.18563814346048,5.64713868945359,4.44756087689741,3.04361001780095,1.89811624617805,2.9645811850322,2.5133520880027,3.18330355265841,3.50935356814416,1.79763881730844,0.864552199498777,0.995706366271836,7.96605184002943,14.9665551518745,29.3040112750009,16.0884548997798,12.0250542043928,9.74887896475428,7.08249215791682,4.13308414342886,4.70996183524124,3.33172342588861,0.296452627087149,5.6727335943472,2.94838492669805,1.34917267430912,1.62288097110802,1.68824011826692,2.5462585178142,3.16465751195892,0.972811360650212,1.64736847912849,4.31304619582064,3.34926852901653,1.24815069245824,1.01031551178845,0.538192240565737,0.964887042726734,3.51031061316549,4.54779388249163,10.5927234687317,12.7308814331391,11.0304416695596,16.0806007144143,11.4260947625287,4.68320754858717,15.7635144106191,16.3883870340093,17.0616602463511,5.40748938561935,7.7708241839653,4.05017364028232,0,0,0.491764273019036,0,4.97706828962155,2.93029216480508,0,0.252470927204373,2.52406575533005,1.95219372148319,5.81643173878557,3.58453196928828,2.89638276307112,4.52922449262132,1.61924280669958,3.79932615284705,3.95287777946523,31.4894890093371,4.11626247103979,3.91744328067962,6.8412522928502,5.27904393512113,3.98235415019888,1.21390318077491,0.906970670894253,0.943025398779491,2.06711325016541,1.53717573971964,2.84271122485043,2.18120237686503,0.356497378384721,0.632073515871632,0,0,11.234506989875,8.8229936075342,2.58717367565509,13.5032332069903,12.5911565886014,8.91844088010353,4.77192159746151,1.8267896946876,0.23467170806371,0,0.661585194164886,5.93590510589328,46.6632193151167,14.2338502830448,9.66915986425405,3.93938159388147,1.45740418314925,6.30446026835733,1.53783792718067,13.4151464176095,12.0376442790313,2.44878994106098,1.50363650493128,0.915112692826091,0,0,0,0.954670618015114,4.9032079005076,9.75933442208874,4.42821897369385,5.01811910434725,4.58561383866973,3.10187996685088,3.96736587481612,3.92633912976044,1.03691978633434,1.24267862617385,0,19.1381178936293,12.2439282938252,16.139448632556,9.42866711387437,7.26511339610346,7.27614879603675,0.39061315453185,0.629156066554265,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0,0.201652370273681,0,0.288635524920988,0.467507608726276,4.0811469050738,0,0,0,0.386379188064381,2.25218970541418,4.76194223094889,4.50173596066038,0.501572104035363,20.8958181768315,14.7304075682297,20.6242384838183,21.8253541576483,15.7568979547248,10.5755145634558,6.07520250208625,10.8077088773813,9.06284817968409,13.9795284172991,1.66059756134683,15.1629451892392,12.6342868258059,11.9122291363464,3.14419743941973,7.35374033800057,20.0022055021454,18.9552252659783,14.4413644316317,15.1618327058278,13.9413614939632,17.9195024316772,15.91905626988,14.8538353579297,14.8183509905482,14.7651044297753,16.6873429360592,14.2752823143142,15.2471783297223,16.1918812147837,17.48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| |phase1_expression=20.6592012765184,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,3.12956537739216,1.74420125104357,0.219686182734472,3.30530828426282,1.25987779462826,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,20.4339625468194,20.6306481916093,20.2826049121977,0.677689064138264,0,0,0,0,0.898800331555214,1.53687322128622,38.9872942279876,34.5615202129128,33.2313438935184,10.2834354385369,13.693849539,35.8898041699815,25.5907407618691,45.960939330501,4.40463523997555,4.08599481872601,5.37622866396852,22.9482140650537,17.1081893536506,19.7947080811569,3.62937898701795,5.06486349028512,5.50073691996516,26.8112012781038,23.2065839702538,22.5543329448614,0.37863096666592,4.38315048619356,1.15945795480671,5.16254326188832,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,9.57735254481427,0,0,0,0,0.506719730950197,0,1.1418387971906,3.10725460376606,1.63286352971307,3.29622120855658,1.82679286987285,1.15307748628029,2.11011696773672,1.76383060703557,0.628332956648377,0.494389935468748,0,0,2.58826959915855,1.76673214768315,0.969750506270444,1.86391761218122,0.292780797011547,0.628340120440365,1.02182822083437,0,0,0,6.5907881338122,11.8950156732843,28.9005009859588,9.21268897019065,10.2286182932132,3.94797284663164,6.65189178577806,4.3790926455636,2.36373244159177,0.252722758433675,0.631325567659422,3.77349284591841,6.43725892413724,10.803727788321,11.1521565198429,12.858898339601,11.0177799444971,15.554486276915,4.9153640440413,10.993967639575,22.1254113796349,18.1229657888867,10.9597866213787,20.019401944243,25.074155989596,24.0765099597294,6.76716507182877,0,0,0,4.97101854085205,7.27030785941398,2.70093092191522,2.60419209143731,2.16440654922144,1.69693824176116,0.697601834251224,0.804820204198858,0.467061369468678,0.658239399653922,0,0.324275238183423,0.146199987425332,0,0.268412837520744,5.88811855979556,7.20332286654991,0.330418782983798,0.528901133327089,5.54549451391608,4.64473343720877,6.18563814346048,5.64713868945359,4.44756087689741,3.04361001780095,1.89811624617805,2.9645811850322,2.5133520880027,3.18330355265841,3.50935356814416,1.79763881730844,0.864552199498777,0.995706366271836,7.96605184002943,14.9665551518745,29.3040112750009,16.0884548997798,12.0250542043928,9.74887896475428,7.08249215791682,4.13308414342886,4.70996183524124,3.33172342588861,0.296452627087149,5.6727335943472,2.94838492669805,1.34917267430912,1.62288097110802,1.68824011826692,2.5462585178142,3.16465751195892,0.972811360650212,1.64736847912849,4.31304619582064,3.34926852901653,1.24815069245824,1.01031551178845,0.538192240565737,0.964887042726734,3.51031061316549,4.54779388249163,10.5927234687317,12.7308814331391,11.0304416695596,16.0806007144143,11.4260947625287,4.68320754858717,15.7635144106191,16.3883870340093,17.0616602463511,5.40748938561935,7.7708241839653,4.05017364028232,0,0,0.491764273019036,0,4.97706828962155,2.93029216480508,0,0.252470927204373,2.52406575533005,1.95219372148319,5.81643173878557,3.58453196928828,2.89638276307112,4.52922449262132,1.61924280669958,3.79932615284705,3.95287777946523,31.4894890093371,4.11626247103979,3.91744328067962,6.8412522928502,5.27904393512113,3.98235415019888,1.21390318077491,0.906970670894253,0.943025398779491,2.06711325016541,1.53717573971964,2.84271122485043,2.18120237686503,0.356497378384721,0.632073515871632,0,0,11.234506989875,8.8229936075342,2.58717367565509,13.5032332069903,12.5911565886014,8.91844088010353,4.77192159746151,1.8267896946876,0.23467170806371,0,0.661585194164886,5.93590510589328,46.6632193151167,14.2338502830448,9.66915986425405,3.93938159388147,1.45740418314925,6.30446026835733,1.53783792718067,13.4151464176095,12.0376442790313,2.44878994106098,1.50363650493128,0.915112692826091,0,0,0,0.954670618015114,4.9032079005076,9.75933442208874,4.42821897369385,5.01811910434725,4.58561383866973,3.10187996685088,3.96736587481612,3.92633912976044,1.03691978633434,1.24267862617385,0,19.1381178936293,12.2439282938252,16.139448632556,9.42866711387437,7.26511339610346,7.27614879603675,0.39061315453185,0.629156066554265,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0,0.201652370273681,0,0.288635524920988,0.467507608726276,4.0811469050738,0,0,0,0.386379188064381,2.25218970541418,4.76194223094889,4.50173596066038,0.501572104035363,20.8958181768315,14.7304075682297,20.6242384838183,21.8253541576483,15.7568979547248,10.5755145634558,6.07520250208625,10.8077088773813,9.06284817968409,13.9795284172991,1.66059756134683,15.1629451892392,12.6342868258059,11.9122291363464,3.14419743941973,7.35374033800057,20.0022055021454,18.9552252659783,14.4413644316317,15.1618327058278,13.9413614939632,17.9195024316772,15.91905626988,14.8538353579297,14.8183509905482,14.7651044297753,16.6873429360592,14.2752823143142,15.2471783297223,16.1918812147837,17.48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| ||
|short_description=p2@Robo2 | |||
}} | }} |
Latest revision as of 17:57, 25 September 2015
Short description: | p2@Robo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Robo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2159 |
Association with transcript: | 0bp_to_ENSMUST00000116586_5end |
EntrezGene: | Robo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.35e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-10 | 23 |
neuron | 1.96e-09 | 33 |
neuronal stem cell | 1.96e-09 | 33 |
neuroblast | 1.96e-09 | 33 |
electrically signaling cell | 1.96e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.02e-13 | 73 |
ectoderm-derived structure | 4.45e-13 | 95 |
ectoderm | 4.45e-13 | 95 |
presumptive ectoderm | 4.45e-13 | 95 |
gray matter | 1.01e-12 | 34 |
neurectoderm | 1.65e-12 | 64 |
neural plate | 1.65e-12 | 64 |
presumptive neural plate | 1.65e-12 | 64 |
central nervous system | 1.82e-12 | 73 |
pre-chordal neural plate | 5.25e-12 | 49 |
nervous system | 5.85e-12 | 75 |
neural tube | 1.15e-11 | 52 |
neural rod | 1.15e-11 | 52 |
future spinal cord | 1.15e-11 | 52 |
neural keel | 1.15e-11 | 52 |
regional part of nervous system | 1.30e-11 | 54 |
anterior neural tube | 4.10e-11 | 40 |
regional part of forebrain | 5.37e-11 | 39 |
forebrain | 5.37e-11 | 39 |
future forebrain | 5.37e-11 | 39 |
brain grey matter | 2.70e-10 | 29 |
regional part of telencephalon | 2.70e-10 | 29 |
telencephalon | 2.70e-10 | 29 |
brain | 7.10e-10 | 47 |
future brain | 7.10e-10 | 47 |
regional part of brain | 2.61e-09 | 46 |
embryo | 6.51e-08 | 320 |
cerebral cortex | 7.00e-08 | 21 |
cerebral hemisphere | 7.00e-08 | 21 |
pallium | 7.00e-08 | 21 |
structure with developmental contribution from neural crest | 8.61e-07 | 92 |