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FFCP PHASE1:Mm9::chr16:5013653..5013662,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:5013653..5013662,-
|DHSsupport=NA
|short_description=p2@Rogdi
|DPIdataset=NA
|description=CAGE_peak_2_at_Rogdi_5end
|association_with_transcript=-7bp_to_NM_133185,uc007ybk.1_5end
|EntrezGene=66049
|EntrezGene=66049
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3TDK6
|UniProt=Q3TDK6
|association_with_transcript=-7bp_to_NM_133185,uc007ybk.1_5end
|cluster_id=chr16:5013653..5013662,-
|description=CAGE_peak_2_at_Rogdi_5end
|id=chr16:5013653..5013662,-
|ontology_enrichment_celltype=CL:0000117!7.89e-12!23;CL:0000337!7.89e-12!23;CL:0000221!4.42e-08!44;CL:0000133!4.42e-08!44;CL:0002319!4.72e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.83e-12,23;CL:0000337,4.83e-12,23;CL:0000221,8.95e-08,44;CL:0000133,8.95e-08,44;CL:0002319,9.66e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.63e-25!52;UBERON:0005068!5.63e-25!52;UBERON:0006241!5.63e-25!52;UBERON:0007135!5.63e-25!52;UBERON:0001017!1.90e-24!73;UBERON:0005743!1.90e-24!73;UBERON:0000955!8.17e-24!50;UBERON:0006238!8.17e-24!50;UBERON:0000073!2.26e-23!75;UBERON:0001016!2.26e-23!75;UBERON:0002616!3.67e-23!49;UBERON:0000033!1.17e-22!63;UBERON:0002346!1.69e-20!71;UBERON:0003075!1.69e-20!71;UBERON:0007284!1.69e-20!71;UBERON:0004121!3.25e-20!102;UBERON:0000924!3.25e-20!102;UBERON:0006601!3.25e-20!102;UBERON:0003080!3.56e-18!40;UBERON:0002020!3.93e-18!34;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0003056!2.38e-17!49;UBERON:0002791!2.37e-15!29;UBERON:0003528!2.37e-15!29;UBERON:0001893!2.37e-15!29;UBERON:0000025!2.14e-13!114;UBERON:0004111!3.56e-13!122;UBERON:0000956!2.23e-11!21;UBERON:0001869!2.23e-11!21;UBERON:0000203!2.23e-11!21;UBERON:0002619!1.49e-09!17;UBERON:0000153!2.98e-08!94;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10;UBERON:0007811!1.36e-07!86;UBERON:0003076!2.19e-07!12;UBERON:0003057!2.19e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-26,54;UBERON:0001049,1.83e-25,52;UBERON:0005068,1.83e-25,52;UBERON:0006241,1.83e-25,52;UBERON:0007135,1.83e-25,52;UBERON:0001017,1.61e-24,73;UBERON:0001016,3.53e-23,75;UBERON:0000955,1.93e-22,47;UBERON:0006238,1.93e-22,47;UBERON:0002346,2.47e-22,64;UBERON:0003075,2.47e-22,64;UBERON:0007284,2.47e-22,64;UBERON:0002616,8.70e-22,46;UBERON:0004121,1.04e-20,95;UBERON:0000924,1.04e-20,95;UBERON:0006601,1.04e-20,95;UBERON:0010371,9.95e-19,73;UBERON:0003080,1.61e-18,40;UBERON:0002020,1.78e-18,34;UBERON:0002780,8.88e-18,39;UBERON:0001890,8.88e-18,39;UBERON:0006240,8.88e-18,39;UBERON:0003056,1.12e-17,49;UBERON:0010314,1.84e-17,92;UBERON:0003528,1.23e-15,29;UBERON:0002791,1.23e-15,29;UBERON:0001893,1.23e-15,29;UBERON:0000025,3.58e-13,114;UBERON:0004111,7.10e-13,122;UBERON:0000956,1.39e-11,21;UBERON:0001869,1.39e-11,21;UBERON:0000203,1.39e-11,21;UBERON:0002619,1.02e-09,17;UBERON:0002021,9.49e-08,10;UBERON:0000411,9.49e-08,10;UBERON:0001950,9.49e-08,10;UBERON:0003076,1.65e-07,12;UBERON:0003057,1.65e-07,12
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|phase1_expression=1.92178616525753,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0.315462165358238,1.50825876966313,0.42438965179803,3.57181818634493,0.992909512008853,1.30599894569468,0.799962113967033,1.14704640533585,0,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,3.76678467663217,0,1.0470474879476,4.1176204162171,1.36609096991689,4.36959317728038,1.00717454380462,1.82478476195126,0.734187008646726,6.25913075478431,2.61630187656536,2.19686182734472,2.91644848611425,3.91961980551015,4.31257693094915,0.838913030288682,0,0,0.514518872071894,1.14613375975503,0.515672092277442,5.26022798234954,7.40587370980846,6.33831403506179,2.03306719241479,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,4.19440154725767,4.61061966385865,3.94020526772215,5.13022565660425,3.99617426567626,9.99778445413313,10.6016899656774,4.40966877173835,2.77951865952885,3.67687514644008,4.40463523997555,10.9811110753261,9.5236050618871,5.67111037239834,4.57438218012048,2.6045668527838,11.725685958058,9.56696437053856,7.48711414106369,6.48182888042069,5.55249555116501,5.21918448310842,0.984440513331393,1.51143120213571,1.15945795480671,1.72084775396277,2.03991400112325,2.69851595818909,3.89865850468601,4.92829575807069,1.68533304158102,1.02258193546835,0.779358013808606,0.70667914902068,2.11265129665021,0,0,0,0.865964164044856,0,0.505524445014783,1.25602267690966,2.84831672011889,2.22663208597237,1.90833859442749,2.43572382649713,1.61430848079241,1.50722640552623,1.17588707135705,1.25666591329675,2.71914464507811,2.31358971071859,0,0.808834249737046,0.662524555381181,1.45462575940567,3.72783522436244,11.1256702864388,7.54008144528438,0.510914110417183,0.239630249011841,2.39961092397363,0.381210681219194,17.6752954497691,16.0125210986519,4.64921102817598,11.6462294528825,8.95004100656157,13.714010940931,10.5456820994042,0.916554274652847,1.8661045591514,3.0326731012041,3.78795340595653,1.56144531555244,2.06911893990126,1.62055916824814,2.10986744970001,1.97305847538851,1.66547836370305,2.06143794031403,7.76110112217047,2.15567992932842,2.26927296201383,2.46331573829528,2.41115305670332,3.05851974148158,1.74126083261083,1.02891068203972,2.38841120182192,0.702213187313235,1.28673953557358,0.284163499395593,3.10688658803253,2.81431271977315,1.98068267607116,1.65721314909647,1.57411385397923,2.1597395804233,2.09280550275367,1.07309360559848,0.817357396570186,2.46839774870221,2.13417703302824,2.75633952455909,1.60819986167866,2.19550115291051,1.8788898626452,12.4071069652835,4.32199371992995,0,1.32225283331772,1.70630600428187,2.32236671860439,1.80414445850931,1.4117846723634,0.889512175379481,0.951128130562796,1.42358718463353,0.164698954724011,0.251335208800269,0.596869416123452,1.36474860983384,0,0.864552199498777,0.199141273254367,3.22435431620239,1.71372768914593,0,1.22190796707189,2.71533482034676,1.54298803758701,2.40298841072178,2.36176236767363,3.45397201251025,1.48076596706161,0,1.33476084572875,0.589676985339609,1.12431056192427,0.608580364165509,1.4470629585145,1.2731292589071,1.15078454980324,1.94562272130042,1.37280706594041,0,1.86070473834252,2.80833905803104,2.52578877947112,1.97337154874103,0,2.77129785249907,1.32643988239339,1.79261474086228,1.69745085775188,2.11221223459652,2.01007508930179,2.38043640886014,0.975668239288994,1.41871629695572,1.99318220683897,2.71073106717728,1.80249646187312,1.89953480052485,1.01254341007058,3.01582567878545,1.08781136763742,1.96705709207614,1.10374698521893,10.4357883492065,9.25972324078405,1.14754461763673,0.757412781613119,0.631016438832513,1.95219372148319,0.861693590931196,0.477937595905104,0.445597348164788,1.98153571552183,0,0.584511715822624,1.97643888973262,9.63963949265421,2.55492153374884,2.67098405500883,2.11753047159649,1.97964147567043,0,2.42780636154981,1.81394134178851,1.88605079755898,2.06711325016541,2.76691633149535,1.55056975900933,2.18120237686503,1.06949213515416,1.58018378967908,1.05418608574999,0,3.06395645178409,2.16073312837572,4.52755393239641,1.71469628025274,3.90148514013002,2.14042581122485,2.79733335023606,2.43571959291679,1.64270195644597,2.54198485036584,1.98475558249466,1.81374878235628,0.968786560175433,0.784068024066026,1.07435109602823,1.80554989719567,0.582961673259701,8.90041449650446,0.512612642393558,1.857481811669,1.48155621895769,0.565105371014073,0.410082683163076,0.686334519619568,0.169978429993855,0.419854356970974,0.138199973804424,2.86401185404534,3.16335993581135,1.62655573701479,1.94409613479242,1.25452977608681,2.18362563746178,2.83215127408124,1.23980183588004,1.83229159388821,0.259229946583586,3.10669656543463,7.89170114157866,2.8408143748356,1.48912641411388,3.30567020184881,2.45403664607689,2.53434188236167,2.11243029562357,1.3020438484395,3.04092098834561,3.14059357073808,6.91272015018877,1.26404448251271,1.41907650703115,1.33524244314275,0.649604114888975,0.716106782669926,0.198681354781265,0.240390899039938,0.443068581523732,0.403865799792591,0.457240839929999,0.403304740547362,0.38983152295901,0.481059208201647,0.116876902181569,1.58711268530648,1.99787358036658,1.79427713218951,1.00730769818447,1.54551675225752,0.93841237725591,1.09890974560359,0.643105137237198,2.00628841614145,12.4245405375755,12.889106622201,11.4579102687879,6.01486138202907,12.3314853558716,6.7985450765073,11.4753825039407,10.8077088773813,14.0474146785103,12.4262474820437,2.17953429926771,3.19219898720825,2.73173769206615,1.45864030240976,2.93458427679175,1.65459157605013,2.22246727801615,2.06035057238894,4.81378814387723,2.02157769411038,2.5347929989024,3.01802146217722,1.96647165686753,1.79270426733634,1.89537047553524,1.42888107384922,1.73826488917283,1.73618298417335,1.23625770240992,2.35518272215036,4.11443102862498,2.12970967391205,2.38436189947321,2.0348498328526,2.1645157495526,1.77690676572521,1.64635175585495,2.63069711437843,1.7654534799962,2.24456908663095,2.25406534435931,1.77308068276014,1.63692417267876,2.32405261778949,1.92906610981141,1.99848462350357,1.87145286756327,3.00819475667618,2.48674831689496,2.8676884485537,2.31867835620421
|short_description=p2@Rogdi
}}
}}

Latest revision as of 15:28, 25 September 2015

Short description:p2@Rogdi
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rogdi_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -7bp_to_NM_133185, uc007ybk.1_5end
EntrezGene:Rogdi
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rogdi

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A417.68
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C210.44
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.83e-1223
neuroblast (sensu Vertebrata)4.83e-1223
ectodermal cell8.95e-0844
neurectodermal cell8.95e-0844
neural cell9.66e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.06e-2654
neural tube1.83e-2552
neural rod1.83e-2552
future spinal cord1.83e-2552
neural keel1.83e-2552
central nervous system1.61e-2473
nervous system3.53e-2375
brain1.93e-2247
future brain1.93e-2247
neurectoderm2.47e-2264
neural plate2.47e-2264
presumptive neural plate2.47e-2264
regional part of brain8.70e-2246
ectoderm-derived structure1.04e-2095
ectoderm1.04e-2095
presumptive ectoderm1.04e-2095
ecto-epithelium9.95e-1973
anterior neural tube1.61e-1840
gray matter1.78e-1834
regional part of forebrain8.88e-1839
forebrain8.88e-1839
future forebrain8.88e-1839
pre-chordal neural plate1.12e-1749
structure with developmental contribution from neural crest1.84e-1792
brain grey matter1.23e-1529
regional part of telencephalon1.23e-1529
telencephalon1.23e-1529
tube3.58e-13114
anatomical conduit7.10e-13122
cerebral cortex1.39e-1121
cerebral hemisphere1.39e-1121
pallium1.39e-1121
regional part of cerebral cortex1.02e-0917
occipital lobe9.49e-0810
visual cortex9.49e-0810
neocortex9.49e-0810
posterior neural tube1.65e-0712
chordal neural plate1.65e-0712
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