FFCP PHASE1:Mm9::chr16:18343975..18344025,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:18343975..18344025,- to FFCP PHASE1:Mm9::chr16:18343975..18344025,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27883 | |EntrezGene=27883 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BTN3,D3Z2V8 | |UniProt=Q8BTN3,D3Z2V8 | ||
|association_with_transcript=0bp_to_ENSMUST00000115628,ENSMUST00000130752,NM_138583,uc007ynj.1,uc007ynk.2_5end | |||
|cluster_id=chr16:18343975..18344025,- | |||
|description=CAGE_peak_1_at_D16H22S680E_5end | |||
|id=chr16:18343975..18344025,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.22e-11!114;UBERON:0004111!2.27e-10!122;UBERON:0000477!1.32e-09!154;UBERON:0002020!2.18e-09!34;UBERON:0001049!2.84e-09!52;UBERON:0005068!2.84e-09!52;UBERON:0006241!2.84e-09!52;UBERON:0007135!2.84e-09!52;UBERON:0002616!1.42e-08!49;UBERON:0000955!3.66e-08!50;UBERON:0006238!3.66e-08!50;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29;UBERON:0001017!3.34e-07!73;UBERON:0005743!3.34e-07!73;UBERON:0000073!5.98e-07!75;UBERON:0001016!5.98e-07!75;UBERON:0002021!8.06e-07!10;UBERON:0000411!8.06e-07!10;UBERON:0001950!8.06e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.22e-11,114;UBERON:0000073,2.08e-10,54;UBERON:0004111,2.32e-10,122;UBERON:0011216,1.12e-09,194;UBERON:0002020,2.18e-09,34;UBERON:0001049,2.84e-09,52;UBERON:0005068,2.84e-09,52;UBERON:0006241,2.84e-09,52;UBERON:0007135,2.84e-09,52;UBERON:0003528,1.70e-07,29;UBERON:0002791,1.70e-07,29;UBERON:0001893,1.70e-07,29;UBERON:0001017,3.34e-07,73;UBERON:0002616,4.34e-07,46;UBERON:0001016,5.98e-07,75;UBERON:0002021,8.06e-07,10;UBERON:0000411,8.06e-07,10;UBERON:0001950,8.06e-07,10 | |||
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|phase1_expression=1.76163731815273,17.7977457896074,18.654968814971,18.1478526784098,17.0304548181758,5.37213670118047,5.13947809310157,4.00282302668886,0.703943610758334,0.70219357896598,0.68487187290202,0.638177271962691,2.39681021903688,4.37102012094987,9.32707333083856,5.26435695213547,8.39474253753776,3.62781490161973,3.70208970735495,2.97072756258621,5.86798702042381,1.58865521921416,2.08959831311148,7.51964387129011,6.8822784320151,14.9300310669905,9.04600191934057,11.8509177977239,7.22088993934221,4.78857246543868,5.09980174507201,2.54012269383853,1.84519436275371,15.8481681015439,3.75507105676657,2.65975432573588,3.26670970019791,4.60384793810598,3.906676722619,5.75876118371178,7.05877785637217,2.04913645487534,3.88408282424923,3.39921408534059,3.14268486780495,3.67093504323363,2.34717403304412,5.23260375313072,4.17403747195497,4.6663175777828,3.77963338388479,1.43752564364972,3.85899993932794,5.80289713609076,4.03312558970957,4.3734104126111,6.87680255853016,10.8291139378263,4.85559506063035,5.81890077199236,8.23980824558033,4.40497891689872,4.4464739805557,6.74924787961049,0.988866362566974,6.3943210345149,2.39680088414724,2.30530983192933,5.80661828927475,2.97013064329719,4.20649922702764,12.5686433137674,14.3564551618549,4.28717797252339,4.69642807989358,3.67687514644008,16.5173821499083,16.7270412891596,18.5863905240055,5.80299666012853,5.58074625974699,3.64639359389732,18.9844439320939,19.1339287410771,18.3357897332172,9.1334861496837,9.11178757114259,5.21918448310842,2.80186915332781,4.00529268565963,1.44932244350839,2.58127163094416,4.75979933595425,9.71465744948071,5.84798775702902,4.92829575807069,5.05599912474307,5.45377032249785,4.1565760736459,5.3000936176551,0.845060518660083,3.84979432242953,15.2883143823987,7.11066703153331,2.81438353314578,1.77351905832569,1.51657333504435,6.50848114398642,5.69663344023778,4.75014845007439,3.64319186208885,3.65358573974569,2.99800146432876,4.22023393547343,3.41007250693544,4.52399728786832,13.5957232253906,2.89198713839823,6.19227386364912,3.558870698843,4.85851340612866,4.84875253135222,5.59175283654366,4.9772735491963,5.65506108396329,4.59822699375465,1.1981512450592,3.59941638596045,1.52484272487678,15.1288545798871,4.57500602818627,2.63874139437015,13.3844726548053,12.2743419518559,11.2205544062162,10.2211995732687,2.85150218780886,4.85187185379363,2.0217820674694,2.10441855886474,1.56144531555244,2.29902104433473,2.70093194708024,3.61691562805716,3.60593445502038,3.33095672740609,3.93547243150861,2.58703370739016,1.29340795759705,0.756424320671277,1.75951124163949,1.97276159184817,3.05851974148158,2.78601733217733,2.88094990971121,1.99034266818493,2.1066395619397,1.54408744268829,1.42081749697796,2.48550927042602,2.34526059981096,3.96136535214233,4.02466050494857,3.34499193970586,4.62801338662135,4.18561100550734,5.633741429392,5.95503246072564,5.75959474697182,6.7308660272429,8.26901857367728,12.1345989563026,7.90380415047782,12.2127841071938,8.20130799400096,5.45394445610208,8.59088835757875,6.08236303326152,2.98603550749328,1.39342003116263,2.96395161040815,2.42020229548011,3.55804870151792,5.1360919050391,9.49058123089023,6.25856027951241,9.55073793441024,7.16243299348143,7.79856348476481,6.29173586057955,9.07779809473716,8.16479220342906,1.70701110857774,1.14248512609729,0,1.62921062276251,1.55161989734101,2.45475369616115,5.6280518040589,5.75679577120448,8.16393384775149,6.91024117962083,9.78293669387591,6.34011401721157,4.91397487783007,6.74586337154561,4.86864291332407,7.71766911207734,6.62027214631691,6.61701116136864,12.9708181420028,7.96228098245436,11.5014565221884,5.20997326735905,4.36852742360385,10.6083128737787,6.45830688678884,7.23665282045051,4.43407656399851,1.89491411770485,1.30371981153621,1.69745085775188,1.64283173801951,3.1826188913945,3.80869825417622,6.43941037930736,2.67979744980525,2.6575762757853,4.62418829106713,5.07976275618788,5.00786447411097,6.50920763616802,7.53956419696361,3.26343410291226,1.96705709207614,0.827810238914197,15.5734072288158,15.4719426301708,0.819674726883377,9.3414243065618,2.2085575359138,1.95219372148319,2.15423397732799,5.25731355495614,6.46116154838943,3.67999490025482,2.83367491172426,4.38383786866968,2.76701444562566,2.57057053137446,2.98074178937364,2.49291845134157,2.76907830901079,3.46437258242324,0,2.18502572539483,3.02323556964751,0.943025398779491,2.36241514304618,0.922305443831782,4.39328098385976,2.54473610634254,4.27796854061666,3.79244109522979,0,3.09406629744561,6.46835250932197,2.16073312837572,2.06973894052407,2.35770738534752,1.95074257006501,2.85390108163313,3.9491764944509,4.26250928760439,3.05073220482823,2.75381692122966,5.51320995137405,2.4732937941222,3.71368181400583,1.74907482291652,2.50681922406587,0.656563598980245,6.99554007911642,12.4234952347041,5.63873906632914,2.06386867963222,6.2966139305702,9.41842285023455,8.06495943554049,9.37990510146743,1.5298058699447,2.6590775941495,1.65839968565309,1.90934123603023,1.58167996790568,2.84647253977588,2.4841228389014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| ||
|short_description=p1@D16H22S680E | |||
}} | }} |
Latest revision as of 17:04, 1 October 2015
Short description: | p1@D16H22S680E |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D16H22S680E_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000115628, ENSMUST00000130752, NM_138583, uc007ynj.1, uc007ynk.2_5end |
EntrezGene: | D16H22S680E |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 1.22e-11 | 114 |
regional part of nervous system | 2.08e-10 | 54 |
anatomical conduit | 2.32e-10 | 122 |
organ system subdivision | 1.12e-09 | 194 |
gray matter | 2.18e-09 | 34 |
neural tube | 2.84e-09 | 52 |
neural rod | 2.84e-09 | 52 |
future spinal cord | 2.84e-09 | 52 |
neural keel | 2.84e-09 | 52 |
brain grey matter | 1.70e-07 | 29 |
regional part of telencephalon | 1.70e-07 | 29 |
telencephalon | 1.70e-07 | 29 |
central nervous system | 3.34e-07 | 73 |
regional part of brain | 4.34e-07 | 46 |
nervous system | 5.98e-07 | 75 |
occipital lobe | 8.06e-07 | 10 |
visual cortex | 8.06e-07 | 10 |
neocortex | 8.06e-07 | 10 |