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FFCP PHASE1:Mm9::chr15:89041953..89042037,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:89041953..89042037,+
|DHSsupport=NA
|short_description=p1@Ppp6r2
|DPIdataset=NA
|description=CAGE_peak_1_at_Ppp6r2_5end
|association_with_transcript=0bp_to_NM_026813,NM_027805,uc007xfu.1,uc007xfv.1,uc007xfw.1,uc011zxt.1_5end
|EntrezGene=71474
|EntrezGene=71474
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=G3X9K4,Q3V4C5,Q8C3X1,Q8C400,Q8R3Q2
|UniProt=G3X9K4,Q3V4C5,Q8C3X1,Q8C400,Q8R3Q2
|association_with_transcript=0bp_to_NM_026813,NM_027805,uc007xfu.1,uc007xfv.1,uc007xfw.1,uc011zxt.1_5end
|cluster_id=chr15:89041953..89042037,+
|description=CAGE_peak_1_at_Ppp6r2_5end
|id=chr15:89041953..89042037,+
|ontology_enrichment_celltype=CL:0000117!8.35e-13!23;CL:0000337!8.35e-13!23;CL:0000540!3.31e-10!33;CL:0000047!3.31e-10!33;CL:0000031!3.31e-10!33;CL:0000404!3.31e-10!33;CL:0000393!2.46e-09!39;CL:0000211!2.46e-09!39;CL:0002319!7.40e-09!43;CL:0000055!1.98e-08!50;CL:0000221!2.57e-08!44;CL:0000133!2.57e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,8.35e-13,23;CL:0000337,8.35e-13,23;CL:0000540,3.31e-10,33;CL:0000047,3.31e-10,33;CL:0000031,3.31e-10,33;CL:0000404,3.31e-10,33;CL:0000393,2.46e-09,39;CL:0000211,2.46e-09,39;CL:0002319,7.40e-09,43;CL:0000221,2.57e-08,44;CL:0000133,2.57e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.08e-22!73;UBERON:0005743!2.08e-22!73;UBERON:0000073!1.22e-20!75;UBERON:0001016!1.22e-20!75;UBERON:0001049!2.30e-20!52;UBERON:0005068!2.30e-20!52;UBERON:0006241!2.30e-20!52;UBERON:0007135!2.30e-20!52;UBERON:0000955!6.85e-20!50;UBERON:0006238!6.85e-20!50;UBERON:0002616!3.50e-19!49;UBERON:0002020!3.27e-18!34;UBERON:0000033!4.86e-18!63;UBERON:0002791!7.20e-16!29;UBERON:0003528!7.20e-16!29;UBERON:0001893!7.20e-16!29;UBERON:0004121!1.02e-15!102;UBERON:0000924!1.02e-15!102;UBERON:0006601!1.02e-15!102;UBERON:0002346!3.62e-15!71;UBERON:0003075!3.62e-15!71;UBERON:0007284!3.62e-15!71;UBERON:0003080!1.30e-14!40;UBERON:0002780!3.83e-14!39;UBERON:0001890!3.83e-14!39;UBERON:0006240!3.83e-14!39;UBERON:0007811!6.56e-14!86;UBERON:0003056!8.50e-14!49;UBERON:0000025!3.26e-13!114;UBERON:0000153!6.23e-13!94;UBERON:0000956!5.79e-12!21;UBERON:0001869!5.79e-12!21;UBERON:0000203!5.79e-12!21;UBERON:0004111!6.45e-12!122;UBERON:0000477!1.97e-11!154;UBERON:0002619!1.30e-09!17;UBERON:0000475!7.61e-09!200;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10;UBERON:0000064!1.59e-07!99;UBERON:0000483!3.46e-07!181;UBERON:0000119!5.71e-07!183
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.08e-22,73;UBERON:0000073,1.09e-21,54;UBERON:0001016,1.22e-20,75;UBERON:0001049,2.30e-20,52;UBERON:0005068,2.30e-20,52;UBERON:0006241,2.30e-20,52;UBERON:0007135,2.30e-20,52;UBERON:0002346,1.49e-19,64;UBERON:0003075,1.49e-19,64;UBERON:0007284,1.49e-19,64;UBERON:0004121,3.57e-19,95;UBERON:0000924,3.57e-19,95;UBERON:0006601,3.57e-19,95;UBERON:0002020,3.27e-18,34;UBERON:0000955,4.10e-18,47;UBERON:0006238,4.10e-18,47;UBERON:0010371,6.01e-18,73;UBERON:0002616,2.02e-17,46;UBERON:0003528,7.20e-16,29;UBERON:0002791,7.20e-16,29;UBERON:0001893,7.20e-16,29;UBERON:0003080,1.30e-14,40;UBERON:0002780,3.83e-14,39;UBERON:0001890,3.83e-14,39;UBERON:0006240,3.83e-14,39;UBERON:0003056,8.50e-14,49;UBERON:0000025,3.26e-13,114;UBERON:0010314,1.59e-12,92;UBERON:0000956,5.79e-12,21;UBERON:0001869,5.79e-12,21;UBERON:0000203,5.79e-12,21;UBERON:0004111,6.45e-12,122;UBERON:0002619,1.30e-09,17;UBERON:0000483,9.37e-09,174;UBERON:0000119,1.67e-08,176;UBERON:0002021,1.43e-07,10;UBERON:0000411,1.43e-07,10;UBERON:0001950,1.43e-07,10
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25742895,17.6048705539536,17.5634168652154,14.1935666435015,20.2296519577231,21.3245915771367,17.0141362289619,22.6826203260638,21.7468759580424,12.9649375897364,14.054555328134,9.26567546559747,16.9172533859321,13.5617814651618,13.1785777882807,20.4201595243612,21.2233147295639,21.0767282295679,25.1247485659046,20.1621004380506,22.1207784439725,10.9471616256689,14.7903778317351,12.7322406518239,16.4704560014083,21.0602236068141,23.5583081059139,22.7441871848849,23.7271157378147,28.9585865288999,32.9701625397469,34.8899213048314,29.7294590668618,43.2444538071805,35.5966702275882,2.66383144048878,3.6782681209885,2.3503846290971,15.6483571166074,10.6979011007174,13.3700685715104,16.291996810009,18.5581678493084,63.8169582157285,58.0009797999043,73.3306257202428,167.900559149783,78.7844897736239,76.2947836363598,62.1020700213261,66.6475380771846,63.8930796667728,60.5779564749629,15.4643147900423,22.3453929104577,20.317299084742,24.5537784238977,18.2363451486345,22.7965950478018,14.8905307627082,20.6035057238894,20.859748623468,27.7966932940177,23.5735748897923,26.7849404768228,31.7444710322901,27.2747149244743,29.9813147948301,38.1034953026459,31.4046523310558,28.5505646286283,25.549325849805,20.6078488188156,16.4577241144999,23.0718548007139,27.6585980338892,28.778590493201,28.1387047441839,29.7843419778701,22.8659966090966,22.0978557607788,28.2472556799393,17.3954104213899,28.7096743860501,33.6885329724427,33.9661765830842,31.916989284309,23.3416999287181,23.9818154820428,23.1592292360954,22.346589621023,24.8674831689496,22.7209161693101,25.0417262470055
|phase1_expression=20.0186058880992,20.2405736430829,36.3999391511629,31.7587421872172,33.5600139064053,18.9703577260435,12.6150825921584,18.8520052224701,3.09735188733667,3.5109678948299,3.76679530096111,3.74929147278081,22.0848941611255,18.0960233007325,37.3082933233542,47.1767373018294,68.5570640565584,24.2905867325843,28.3826877563879,24.6145998042858,28.9997619415148,10.7234227296956,6.26879493933445,17.5991665072747,12.6175104586944,21.2465826722557,20.2458138194765,17.0222273821852,16.7220609121609,19.1542898617547,10.4213340007993,20.9560122241678,22.1423323530445,0,8.95440021228951,8.47796691328311,6.12508068787107,9.20769587621197,9.37602413428561,9.42342739152837,11.7646297606203,14.3439551841274,7.2826552954673,29.9634426781874,29.9061947097568,28.266199832899,36.7723931843578,25.9449936092731,23.0670491871195,25.2758868796568,20.4380175573029,21.5628846547457,13.2548258785612,12.3311564141929,13.779845764841,13.6347501099052,18.9112070359579,19.5955395065428,60.6949382578793,49.7251520515711,74.7921056137291,18.9752937958714,17.7858959222228,12.1486461832989,13.8441290759376,11.3676818391376,23.3688086204356,28.0479362884735,61.9026985481612,65.2078682142066,60.3632639078466,53.4167340835113,42.848496944613,54.1409332530097,41.5969344219146,72.6182841421917,60.5637345496638,69.3342245802569,50.9973690410728,60.2720334926986,43.6396059983494,63.5514312079247,42.4358158482099,42.7699583624077,50.729018261901,42.7211448936818,41.9996458357354,61.5118171223492,6.73963120665338,14.9631689011435,31.3053647797812,24.9522924324602,4.75979933595425,25.9057531986152,30.5394916200404,37.6342585161762,23.0328849016073,16.3613109674935,15.846946280775,16.9602995764963,14.7885590765515,23.0987659345772,63.7013099266614,63.9960032837998,11.2575341325831,13.6814327356553,13.1436355703844,26.3764762151029,31.5904218049549,20.7818994690755,12.6644288539279,13.0920155674221,14.5287763271317,14.1679282119465,14.9337658062345,17.0906564208359,14.3373081285937,26.0278842455841,22.1152637987469,33.4857379391137,40.413997878252,40.7295212633587,18.6391761218122,98.0815669988683,108.912287542997,14.3055950916811,5.99075622529601,0.599902730993408,4.57452817463033,49.2811203641867,55.8150735438724,60.3140890141749,67.270011914411,70.3217507658409,49.4535546051753,61.9761624918834,25.6635196902797,32.3458123586242,24.0086620511991,31.987162094744,14.053007839972,14.7137346837423,16.5657159420921,20.9479696791644,35.6511255552958,32.412771232067,43.196495022035,35.4423617912451,15.089759505299,21.7471992192992,22.6976950171494,16.001288467213,20.5754964426942,20.5468778248078,22.0186885956499,12.5391588095651,1.40442637462647,2.31613116403244,5.96743348730745,10.3562886267751,11.9608290590359,15.4853372856473,17.992599904476,15.5443743080449,15.5809784016252,20.6955210827863,24.9494263301646,25.9219060055116,23.6966183875412,30.2068133905535,41.2640240588406,36.2575968814824,36.0062189077323,52.0720904790242,59.7223453922121,54.8481583981586,23.1293148088659,15.8670339998127,15.5700422890721,16.953277045812,15.9795652039396,15.1262643467507,12.4531704553127,13.1255682017666,15.6594590309689,17.1286912912971,18.0961350336194,15.5186048192098,17.3518037536017,20.6728463990471,18.1555961894743,16.1304431336037,11.3800740571849,19.1937501184344,25.9227792048085,16.9030602111611,16.0980564349129,20.479659407973,20.5518745653836,16.9751670176542,20.4098346193787,17.3990001129739,19.5658733877518,18.8534969459186,17.6903095601883,19.1132795527126,20.8945925030158,20.0177042594506,14.0044218479781,22.727994858614,27.8872590053061,16.1991233780968,8.62609239164127,20.0956111740992,19.6583734062173,26.2682033064996,21.3482922091076,24.1221760681684,28.2672380954905,13.4538902357044,14.6668478797823,19.0114496068211,18.5405296147917,20.4357634079015,11.9021820443007,23.2209040950781,23.0147310395039,26.1328333785554,29.0207678956627,23.9240439484977,23.8305274974936,26.0368305446721,18.0949540727127,18.4927932498361,8.35999264132362,16.0043312856745,45.1147157865695,56.1443978776653,13.7705354116407,60.0880806746408,21.1390507008892,26.9402733564681,27.5741949097983,19.1175038362042,16.2643032080148,22.3630459323178,22.2645885921192,21.0424217696145,27.2748566783101,78.7237225233427,15.4714692877013,19.9433476107326,25.2474786998043,20.951205617512,21.2392221343941,18.4513283477786,17.8370898609203,13.013750503157,13.2885851796348,19.0609791725235,18.3484088149437,16.3590178264877,20.3203505679291,22.7546465713787,10.5418608574999,31.9720184069379,29.2778060948258,16.7456817449118,18.2395744133684,17.1469628025274,21.1034878034306,29.9659613571479,19.087686389846,24.3571959291679,6.8054795338476,9.95610733059955,18.5243854366168,36.6047481530086,34.5533873129238,25.6933060193944,24.2325858326367,26.5908257586999,19.5292160542,44.1312218785013,26.8267282852629,21.4642342681751,21.4825651748866,41.2526920840273,43.468764415286,34.5455041541849,8.49892149969276,9.6566502103324,7.60099855924331,12.4107180341965,13.4442797271983,18.0954325742895,17.6048705539536,17.5634168652154,14.1935666435015,20.2296519577231,21.3245915771367,17.0141362289619,22.6826203260638,21.7468759580424,12.9649375897364,14.054555328134,9.26567546559747,16.9172533859321,13.5617814651618,13.1785777882807,20.4201595243612,21.2233147295639,21.0767282295679,25.1247485659046,20.1621004380506,22.1207784439725,10.9471616256689,14.7903778317351,12.7322406518239,16.4704560014083,21.0602236068141,23.5583081059139,22.7441871848849,23.7271157378147,28.9585865288999,32.9701625397469,34.8899213048314,29.7294590668618,43.2444538071805,35.5966702275882,2.66383144048878,3.6782681209885,2.3503846290971,15.6483571166074,10.6979011007174,13.3700685715104,16.291996810009,18.5581678493084,63.8169582157285,58.0009797999043,73.3306257202428,167.900559149783,78.7844897736239,76.2947836363598,62.1020700213261,66.6475380771846,63.8930796667728,60.5779564749629,15.4643147900423,22.3453929104577,20.317299084742,24.5537784238977,18.2363451486345,22.7965950478018,14.8905307627082,20.6035057238894,20.859748623468,27.7966932940177,23.5735748897923,26.7849404768228,31.7444710322901,27.2747149244743,29.9813147948301,38.1034953026459,31.4046523310558,28.5505646286283,25.549325849805,20.6078488188156,16.4577241144999,23.0718548007139,27.6585980338892,28.778590493201,28.1387047441839,29.7843419778701,22.8659966090966,22.0978557607788,28.2472556799393,17.3954104213899,28.7096743860501,33.6885329724427,33.9661765830842,31.916989284309,23.3416999287181,23.9818154820428,23.1592292360954,22.346589621023,24.8674831689496,22.7209161693101,25.0417262470055
|short_description=p1@Ppp6r2
}}
}}

Latest revision as of 07:17, 27 September 2015

Short description:p1@Ppp6r2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ppp6r2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_NM_026813, NM_027805, uc007xfu.1, uc007xfv.1, uc007xfw.1, uc011zxt.1_5end
EntrezGene:Ppp6r2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ppp6r2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.76
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.97
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A137.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A347.18
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A568.56
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.29
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H921.25
GP2+ M cell, pool2.CNhs13231.11846-124I120.25
GP2+ M cell, pool3.CNhs13240.11847-124I217.02
Ileum epithelium, pool1.CNhs13199.10252-104B916.72
Ileum epithelium, pool2.CNhs13232.10253-104C119.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D929.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B328.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B736.77
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.07
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.60
Mouse Granule cells, donor1.CNhs12131.11713-123C360.69
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C774.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C823.37
Mouse Microglia, donor2.CNhs12634.11736-123E828.05
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D561.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F565.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D960.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F153.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D542.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D254.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F241.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D672.62
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D360.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F369.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D460.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F443.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D863.55
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.44
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I650.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F642.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E161.51
Mouse Schwann, donor1.CNhs12507.11728-123D96.74
Mouse Schwann, donor2.CNhs12573.11746-123F914.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.31
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.91
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F637.63
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.96
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I863.70
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.38
accessory axillary lymph node, adult.CNhs10475.1063-29H931.59
adrenal gland, adult.CNhs10508.49-24D720.78
adrenal gland, embryo E14.CNhs11038.406-44C512.66
adrenal gland, embryo E16.CNhs11004.1254-43D613.09
adrenal gland, embryo E17.CNhs11043.1263-45I114.53
adrenal gland, embryo E18.CNhs11026.1262-18F514.17
adrenal gland, neonate N00.CNhs11191.1311-23C114.93
adrenal gland, neonate N25.CNhs11223.1377-27I317.09
amnion, adult pregnant day17.5.CNhs10488.583-22A814.34
aorta, adult.CNhs10498.46-23H126.03
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F533.49
bone (os femoris), neonate N16.CNhs11225.1525-43A640.41
bone (os femoris), neonate N20.CNhs11195.1350-25C340.73
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B298.08
cerebellum, neonate N30.CNhs11135.1395-42I2108.91
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A449.28
corpus striatum, adult.CNhs10487.19-21D855.82
corpus striatum, neonate N00.CNhs11226.630-43F160.31
cortex, adult.CNhs10473.12-14D567.27
cortex, neonate N30.CNhs11107.1392-42F270.32
diencephalon, adult.CNhs10482.20-12F249.45
diencephalon, neonate N30.CNhs11201.1388-42B261.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.35
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G431.99
eyeball, embryo E12.CNhs11016.345-16C614.05
eyeball, embryo E14.CNhs10521.399-16E214.71
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D420.95
eyeball, neonate N00.CNhs11207.633-15C635.65
eyeball, neonate N01.CNhs11140.1532-43E732.41
eyeball, neonate N02.CNhs11205.1551-44G843.20
eyeball, neonate N16.CNhs11188.777-19A235.44
forelimb, embryo E11.CNhs10596.335-25E215.09
forelimb, embryo E12.CNhs10600.359-14H221.75
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A816.00
forelimb, embryo E15.CNhs11007.437-20E720.58
forelimb, embryo E17.CNhs10598.1517-43C420.55
forelimb, embryo E18.CNhs11008.1520-43B522.02
gonad, embryo E13.CNhs11044.1564-45I612.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F511.96
heart, embryo E13.CNhs11013.376-3I915.49
heart, embryo E14.CNhs10597.403-26D417.99
heart, embryo E15.CNhs11017.431-16C815.54
heart, embryo E16.CNhs11021.457-17C615.58
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G324.95
heart, neonate N00.CNhs11213.639-21E325.92
heart, neonate N03.CNhs11221.1349-25I223.70
heart, neonate N10.CNhs11118.749-24G130.21
heart, neonate N16.CNhs11209.782-15G141.26
heart, neonate N20.CNhs11127.821-26I636.26
heart, neonate N25.CNhs11196.1351-25D336.01
heart, neonate N30.CNhs11202.1390-42D252.07
hippocampus, adult.CNhs10478.13-16E859.72
hippocampus, neonate N00.CNhs11228.627-43G154.85
intestinal mucosa, adult.CNhs10506.860-29I323.13
intestine, adult.CNhs10496.178-9A315.87
intestine, embryo E12.CNhs11019.1251-16I515.57
intestine, embryo E13.CNhs11010.381-16D516.95
intestine, embryo E15.CNhs10602.976-16D815.98
intestine, embryo E16.CNhs10585.463-22H415.13
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E917.13
intestine, neonate N06.CNhs11102.688-20B818.10
intestine, neonate N07.CNhs11095.720-20F215.52
intestine, neonate N10.CNhs11098.755-23A517.35
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E318.16
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I911.38
kidney, embryo E15.CNhs10997.434-16F819.19
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I216.90
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G720.48
kidney, neonate N10.CNhs11206.758-6D520.55
kidney, neonate N20.CNhs11113.832-19I116.98
kidney, neonate N25.CNhs11122.1353-25F320.41
kidney, neonate N30.CNhs11203.1385-42H117.40
liver, adult pregnant day01.CNhs10466.508-5B219.57
liver, embryo E12.CNhs10601.355-15F818.85
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E119.11
liver, embryo E15.CNhs10520.433-16D720.89
liver, embryo E16.CNhs10523.462-17F520.02
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G422.73
liver, neonate N00.CNhs11117.641-24F427.89
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H220.10
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A326.27
liver, neonate N25.CNhs11198.1368-26H121.35
liver, neonate N30.CNhs11106.1382-42D124.12
lung, adult.CNhs10474.28-22B128.27
lung, embryo E12.CNhs10522.354-16G213.45
lung, embryo E14.CNhs10604.404-26F814.67
lung, embryo E15.CNhs11020.432-17C519.01
lung, embryo E16.CNhs10998.458-17B618.54
lung, embryo E17.CNhs10605.480-44A620.44
lung, embryo E18.CNhs10583.1287-20I611.90
lung, neonate N00.CNhs11224.640-42C623.22
lung, neonate N06.CNhs11212.683-20E523.01
lung, neonate N07.CNhs11111.715-19A326.13
lung, neonate N10.CNhs11219.750-23E629.02
lung, neonate N20.CNhs11109.822-18A423.92
lung, neonate N25.CNhs11119.1359-25C723.83
lung, neonate N30.CNhs11133.1394-42H226.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A118.49
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C245.11
medulla oblongata, neonate N30.CNhs11200.1396-42A356.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C260.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.94
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E327.57
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.27
olfactory brain, adult.CNhs10489.18-22I978.72
ovary, adult.CNhs10507.91-2I715.47
ovary, embryo E18.CNhs11040.505-44H719.94
ovary, neonate N00.CNhs11217.1299-22I425.25
oviduct, adult pregnant day01.CNhs10500.988-6G620.95
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F418.45
pancreas, embryo E15.CNhs11042.1556-45F217.84
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D820.32
pancreas, neonate N16.CNhs11136.787-43B622.75
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H531.97
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E616.75
pituitary gland, embryo E13.CNhs11009.370-44C718.24
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B921.10
pituitary gland, embryo E16.CNhs11036.449-43F629.97
pituitary gland, embryo E17.CNhs11039.1265-44F519.09
pituitary gland, neonate N00.CNhs11190.1308-22E924.36
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G39.96
prostate, adult.CNhs10470.859-1F818.52
skin, adult.CNhs10492.30-1C336.60
skin, neonate N00.CNhs11124.650-25G434.55
skin, neonate N03.CNhs11215.662-22H325.69
skin, neonate N06.CNhs11097.693-20I524.23
skin, neonate N10.CNhs11108.762-6C426.59
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C944.13
spleen, adult.CNhs10465.25-2G226.83
spleen, embryo E16.CNhs11035.461-43C121.46
spleen, embryo E18.CNhs11011.1271-21F221.48
spleen, neonate N10.CNhs11116.752-24D141.25
spleen, neonate N20.CNhs11112.824-19H143.47
spleen, neonate N25.CNhs11099.1354-25G334.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.60
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E313.44
stomach, embryo E15.CNhs10603.1252-16G818.10
stomach, embryo E16.CNhs11022.459-17D417.60
stomach, embryo E17.CNhs11006.1035-18D517.56
stomach, embryo E18.CNhs10999.1286-20C614.19
stomach, neonate N03.CNhs11193.1340-24B820.23
stomach, neonate N07.CNhs11210.718-18A921.32
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I122.68
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F514.05
testis, embryo E15.CNhs11034.443-27C59.27
testis, embryo E16.CNhs11033.470-26G516.92
testis, embryo E17.CNhs11029.486-18I513.56
testis, embryo E18.CNhs11027.503-18G513.18
testis, neonate N00.CNhs11189.1300-22B720.42
testis, neonate N07.CNhs11222.726-26I421.22
testis, neonate N10.CNhs11204.763-44D921.08
testis, neonate N20.CNhs11110.839-18H325.12
testis, neonate N30.CNhs11130.1391-42E220.16
thymus, adult.CNhs10471.38-12B522.12
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I214.79
thymus, embryo E16.CNhs11002.456-26C512.73
thymus, embryo E17.CNhs10581.478-18C116.47
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F823.56
thymus, neonate N03.CNhs11137.2104-43C722.74
thymus, neonate N06.CNhs11197.681-26C423.73
thymus, neonate N07.CNhs11211.713-19D328.96
thymus, neonate N10.CNhs11194.748-24E432.97
thymus, neonate N20.CNhs11186.820-7A234.89
thymus, neonate N25.CNhs11125.1362-25G729.73
thymus, neonate N30.CNhs11132.1393-42G243.24
tongue, adult.CNhs10499.32-1B435.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E415.65
uterus, adult pregnant day19.CNhs10497.590-15F510.70
uterus, adult.CNhs10509.92-27E513.37
vagina, adult.CNhs10502.89-27D516.29
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A163.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7167.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A478.78
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A576.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A766.65
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A960.58
whole body, embryo E11.CNhs11014.324-5I815.46
whole body, embryo E12.CNhs10587.857-27C922.35
whole body, embryo E13.CNhs10512.372-23H220.32
whole body, embryo E14.5.CNhs10578.420-27D224.55
whole body, embryo E14.CNhs10519.395-14B118.24
whole body, embryo E16.CNhs10514.453-14F222.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.55
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.66
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G528.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G533.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G533.97
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.92
whole body, embryo E17.5.CNhs10513.490-9F923.34
whole body, embryo E17.CNhs10517.475-3I523.98
whole body, embryo E18.CNhs10516.493-3B323.16
whole body, neonate N00.CNhs10525.657-19C222.35
whole body, neonate N01.CNhs10576.659-23C624.87
whole body, neonate N06.CNhs10515.692-21D122.72
whole body, neonate N10.CNhs10518.761-6B425.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.35e-1323
neuroblast (sensu Vertebrata)8.35e-1323
neuron3.31e-1033
neuronal stem cell3.31e-1033
neuroblast3.31e-1033
electrically signaling cell3.31e-1033
electrically responsive cell2.46e-0939
electrically active cell2.46e-0939
neural cell7.40e-0943
ectodermal cell2.57e-0844
neurectodermal cell2.57e-0844

Uber anatomy
Ontology termp-valuen
central nervous system2.08e-2273
regional part of nervous system1.09e-2154
nervous system1.22e-2075
neural tube2.30e-2052
neural rod2.30e-2052
future spinal cord2.30e-2052
neural keel2.30e-2052
neurectoderm1.49e-1964
neural plate1.49e-1964
presumptive neural plate1.49e-1964
ectoderm-derived structure3.57e-1995
ectoderm3.57e-1995
presumptive ectoderm3.57e-1995
gray matter3.27e-1834
brain4.10e-1847
future brain4.10e-1847
ecto-epithelium6.01e-1873
regional part of brain2.02e-1746
brain grey matter7.20e-1629
regional part of telencephalon7.20e-1629
telencephalon7.20e-1629
anterior neural tube1.30e-1440
regional part of forebrain3.83e-1439
forebrain3.83e-1439
future forebrain3.83e-1439
pre-chordal neural plate8.50e-1449
tube3.26e-13114
structure with developmental contribution from neural crest1.59e-1292
cerebral cortex5.79e-1221
cerebral hemisphere5.79e-1221
pallium5.79e-1221
anatomical conduit6.45e-12122
regional part of cerebral cortex1.30e-0917
epithelium9.37e-09174
cell layer1.67e-08176
occipital lobe1.43e-0710
visual cortex1.43e-0710
neocortex1.43e-0710
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