FFCP PHASE1:Mm9::chr15:53734027..53734070,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:53734027..53734070,- to FFCP PHASE1:Mm9::chr15:53734027..53734070,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=320679 | |EntrezGene=320679 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q0VE29 | |UniProt=Q0VE29 | ||
|association_with_transcript=14bp_to_ENSMUST00000078673_5end | |||
|cluster_id=chr15:53734027..53734070,- | |||
|description=CAGE_peak_2_at_Samd12_5end | |||
|id=chr15:53734027..53734070,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.89e-14!71;UBERON:0003075!7.89e-14!71;UBERON:0007284!7.89e-14!71;UBERON:0004121!8.97e-14!102;UBERON:0000924!8.97e-14!102;UBERON:0006601!8.97e-14!102;UBERON:0001017!1.68e-13!73;UBERON:0005743!1.68e-13!73;UBERON:0000073!9.23e-13!75;UBERON:0001016!9.23e-13!75;UBERON:0000033!9.97e-13!63;UBERON:0001049!4.20e-12!52;UBERON:0005068!4.20e-12!52;UBERON:0006241!4.20e-12!52;UBERON:0007135!4.20e-12!52;UBERON:0000955!7.52e-12!50;UBERON:0006238!7.52e-12!50;UBERON:0002616!2.97e-11!49;UBERON:0002020!1.22e-10!34;UBERON:0003056!5.85e-10!49;UBERON:0003080!5.00e-09!40;UBERON:0002791!6.00e-09!29;UBERON:0003528!6.00e-09!29;UBERON:0001893!6.00e-09!29;UBERON:0002780!1.59e-08!39;UBERON:0001890!1.59e-08!39;UBERON:0006240!1.59e-08!39;UBERON:0007023!2.40e-08!51;UBERON:0002021!6.51e-07!10;UBERON:0000411!6.51e-07!10;UBERON:0001950!6.51e-07!10;UBERON:0002619!6.97e-07!17;UBERON:0000956!9.10e-07!21;UBERON:0001869!9.10e-07!21;UBERON:0000203!9.10e-07!21;UBERON:0004111!9.43e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.32e-14,64;UBERON:0003075,8.32e-14,64;UBERON:0007284,8.32e-14,64;UBERON:0000073,1.87e-13,54;UBERON:0001017,2.85e-13,73;UBERON:0004121,1.37e-12,95;UBERON:0000924,1.37e-12,95;UBERON:0006601,1.37e-12,95;UBERON:0001049,2.04e-12,52;UBERON:0005068,2.04e-12,52;UBERON:0006241,2.04e-12,52;UBERON:0007135,2.04e-12,52;UBERON:0001016,2.23e-12,75;UBERON:0010371,3.29e-12,73;UBERON:0002020,3.16e-11,34;UBERON:0000955,1.44e-10,47;UBERON:0006238,1.44e-10,47;UBERON:0002616,6.46e-10,46;UBERON:0003528,3.20e-09,29;UBERON:0002791,3.20e-09,29;UBERON:0001893,3.20e-09,29;UBERON:0003056,3.34e-09,49;UBERON:0007023,4.49e-09,51;UBERON:0010314,6.42e-09,92;UBERON:0003080,1.21e-08,40;UBERON:0004111,3.84e-08,122;UBERON:0002780,4.37e-08,39;UBERON:0001890,4.37e-08,39;UBERON:0006240,4.37e-08,39;UBERON:0002021,4.69e-08,10;UBERON:0000411,4.69e-08,10;UBERON:0001950,4.69e-08,10;UBERON:0002619,2.45e-07,17 | |||
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| ||
|short_description=p2@Samd12 | |||
}} | }} |
Latest revision as of 19:57, 26 September 2015
Short description: | p2@Samd12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Samd12_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 14bp_to_ENSMUST00000078673_5end |
EntrezGene: | Samd12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.32e-14 | 64 |
neural plate | 8.32e-14 | 64 |
presumptive neural plate | 8.32e-14 | 64 |
regional part of nervous system | 1.87e-13 | 54 |
central nervous system | 2.85e-13 | 73 |
ectoderm-derived structure | 1.37e-12 | 95 |
ectoderm | 1.37e-12 | 95 |
presumptive ectoderm | 1.37e-12 | 95 |
neural tube | 2.04e-12 | 52 |
neural rod | 2.04e-12 | 52 |
future spinal cord | 2.04e-12 | 52 |
neural keel | 2.04e-12 | 52 |
nervous system | 2.23e-12 | 75 |
ecto-epithelium | 3.29e-12 | 73 |
gray matter | 3.16e-11 | 34 |
brain | 1.44e-10 | 47 |
future brain | 1.44e-10 | 47 |
regional part of brain | 6.46e-10 | 46 |
brain grey matter | 3.20e-09 | 29 |
regional part of telencephalon | 3.20e-09 | 29 |
telencephalon | 3.20e-09 | 29 |
pre-chordal neural plate | 3.34e-09 | 49 |
adult organism | 4.49e-09 | 51 |
structure with developmental contribution from neural crest | 6.42e-09 | 92 |
anterior neural tube | 1.21e-08 | 40 |
anatomical conduit | 3.84e-08 | 122 |
regional part of forebrain | 4.37e-08 | 39 |
forebrain | 4.37e-08 | 39 |
future forebrain | 4.37e-08 | 39 |
occipital lobe | 4.69e-08 | 10 |
visual cortex | 4.69e-08 | 10 |
neocortex | 4.69e-08 | 10 |
regional part of cerebral cortex | 2.45e-07 | 17 |