FFCP PHASE1:Mm9::chr15:100299512..100299557,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:100299512..100299557,+ to FFCP PHASE1:Mm9::chr15:100299512..100299557,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68614 | |EntrezGene=68614 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=43 | |||
|TSSclassifier=NA | |||
|UniProt=Q924L1 | |UniProt=Q924L1 | ||
|association_with_transcript=46bp_to_uc007xrg.2,uc007xrh.2_5end | |||
|cluster_id=chr15:100299512..100299557,+ | |||
|description=CAGE_peak_1_at_Letmd1_5end | |||
|id=chr15:100299512..100299557,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-10!73;UBERON:0005743!1.10e-10!73;UBERON:0000073!2.82e-10!75;UBERON:0001016!2.82e-10!75;UBERON:0002346!1.03e-08!71;UBERON:0003075!1.03e-08!71;UBERON:0007284!1.03e-08!71;UBERON:0001049!1.23e-08!52;UBERON:0005068!1.23e-08!52;UBERON:0006241!1.23e-08!52;UBERON:0007135!1.23e-08!52;UBERON:0004121!4.57e-08!102;UBERON:0000924!4.57e-08!102;UBERON:0006601!4.57e-08!102;UBERON:0000955!1.36e-07!50;UBERON:0006238!1.36e-07!50;UBERON:0000479!2.46e-07!349;UBERON:0002616!2.92e-07!49;UBERON:0002020!4.97e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0001049,1.23e-08,52;UBERON:0005068,1.23e-08,52;UBERON:0006241,1.23e-08,52;UBERON:0007135,1.23e-08,52;UBERON:0000073,1.60e-08,54;UBERON:0000955,1.84e-07,47;UBERON:0006238,1.84e-07,47;UBERON:0000479,2.46e-07,349;UBERON:0002616,3.96e-07,46;UBERON:0002346,4.32e-07,64;UBERON:0003075,4.32e-07,64;UBERON:0007284,4.32e-07,64;UBERON:0002020,4.97e-07,34 | |||
|phase1_expression=21.4599455120424,9.42233600626275,12.2849794635175,15.4256747766483,14.0250804384977,12.7588246653036,16.5864974822823,36.2836538870829,19.851209823385,13.8098070529976,37.4967350413856,50.8946374390246,48.6210073004624,50.8786742078565,23.3176833270964,27.1316858302367,18.88817070946,49.3698288785642,45.7962208243167,44.9853030905912,35.6331385732982,49.8440575028444,49.3667601472588,21.5989770771099,20.6468352960453,7.46501553349526,8.61523992318149,15.9448712187558,23.9429508515031,18.3981994724749,10.4213340007993,35.5617177137393,38.1340168302433,31.6963362030877,25.1300909183609,26.4313086120003,28.3795405204693,3.34825304589526,3.906676722619,3.14114246384279,4.70585190424811,6.14740936462601,4.36959317728038,17.2478640626541,16.4230628575614,20.0065959856233,43.8139152834902,64.9714966013731,45.2553536433012,44.7188767870852,37.7963338388479,58.9385513896383,27.348564787411,47.1485392307374,47.7253194782299,31.1283917603496,43.8396163106298,26.2992767061496,53.2092292060742,65.5948814297321,65.2846345611365,16.2645375393183,24.0109594950008,85.4904731417329,118.663963508037,90.9414547131008,54.8268202248681,72.2330414004523,40.0241903510724,47.7921021694185,35.3345935070322,66.2710283816824,65.5979566626292,45.444086508748,43.0346164871881,54.2339084099912,52.8556228797066,47.7550644438602,36.8655679814984,53.0182876675379,44.8289453651807,43.2358097562111,45.5068288372251,39.3933827022176,38.8107549353098,49.7922309450498,54.3859820652573,61.3254176765239,32.0321797799369,39.3727828156353,32.4648227345879,23.2314446784974,35.358509352803,50.7321000139548,42.2354671340985,51.0750651290963,41.7119927791303,28.1210032253795,25.1992424464783,29.6805242588686,26.3377194982393,26.9485602570067,35.6727335589304,49.7746692207332,8.22665955842614,4.56047757855178,2.52762222507392,34.3693477954371,73.5383589557968,82.9791557372371,40.0751104829774,58.152906357619,50.7354093963329,50.3413619445759,63.9682566818234,152.559241874226,53.8885029660935,652.721497136481,36.2690326299448,34.779872738693,32.4637032136779,32.4866419600599,37.2783522436244,66.7540217186328,52.7805701169907,24.5238773000248,32.4698987411044,24.5960119707297,34.1818910826544,61.4141621559773,62.6775825861518,61.8219412395293,70.0512010374874,79.5275072297328,52.7781633181283,56.1354770214441,39.615512537773,28.9868241521517,37.6556910066175,18.5188833180097,41.8987826339906,28.9676651586176,34.031742533211,35.2649273735573,52.1839948490685,42.4056414142853,38.7925139677277,36.7358786449402,20.6945273215529,35.1737309112144,35.5421270811177,38.140057442398,38.9266148915837,30.9944428204728,30.2499740519677,40.8020246977911,25.2796747432765,34.7419674604865,32.9629659298887,23.4052122965117,29.0812314376559,23.4080679899319,28.17262353464,27.1534639811417,24.2199367233184,23.7184623645416,22.8032391189676,23.4698338158011,26.8232555358973,45.1460526217512,52.7757950143521,30.1171974096185,36.4453191383144,40.6645448843926,77.596991020163,55.1568722352965,27.0943402046714,36.4941781995691,48.2031446209629,42.4993109504602,42.6551296976129,49.6141470573423,43.5860965935946,35.381966456936,18.9811624617805,24.7048432086016,29.4062194296315,28.8486884459669,31.9741102875357,30.5598598942435,26.8011181844621,28.0789195288658,31.8642073601177,28.7906251776517,32.6852433451933,28.511185898344,37.4328300233518,37.3122561816495,44.6449952097256,59.1916693398205,58.4035267569914,68.1152344848339,51.5827571131639,36.3722330461085,42.6533019395651,36.6525243187312,33.471920029103,42.6883572761778,46.3419050242184,82.8564875858335,72.4744463684408,59.8543880750018,31.629005436018,94.8959416554684,73.6408908550363,37.1290950582254,45.9257378616095,77.6734069395021,38.9829231251536,31.4555743539005,25.5855013013981,26.4802333809293,27.9281395463317,35.5113265776649,35.4685024920161,35.5143239101194,45.8718269349016,36.0987444127503,41.6176946196041,44.7346849173965,46.27957514006,36.4515627625409,55.7927750575307,38.0733978673097,22.1293922858566,36.6995872585294,46.0780193264963,46.0641928307358,21.1476079535911,42.667586697539,41.6470849629459,46.8526493155966,42.6538327510942,43.2533524294119,42.1089494015725,57.464535750133,46.9580413942877,47.9299606974552,47.4345333535828,70.6906896127976,61.8858771508051,44.8725321241483,41.6990615945155,52.7904393512113,37.1686387351896,40.7871468740369,38.9997388484529,38.0982261106914,33.9597176812889,24.9022469834581,29.4608254211772,31.2639007350655,27.4502981356235,28.1272714562876,21.0837217149998,35.0660847043835,39.8314338731932,45.1953346018589,55.7535927103672,42.4387329362553,44.8670791114952,32.9982312563831,44.5927845831748,42.3206279269293,24.4058576386259,45.3320631648575,29.5508053393649,36.2749756471256,49.7310434223389,31.0611563380003,24.2325858326367,26.5908257586999,30.0225261728746,57.110993019237,35.5411432059534,25.5919716274396,29.4459298517842,23.7344255825911,28.2957051382522,28.3684934776088,27.5365056590046,33.0285427483833,36.6229930581723,20.0480829783174,38.75115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| |phase1_expression=21.4599455120424,9.42233600626275,12.2849794635175,15.4256747766483,14.0250804384977,12.7588246653036,16.5864974822823,36.2836538870829,19.851209823385,13.8098070529976,37.4967350413856,50.8946374390246,48.6210073004624,50.8786742078565,23.3176833270964,27.1316858302367,18.88817070946,49.3698288785642,45.7962208243167,44.9853030905912,35.6331385732982,49.8440575028444,49.3667601472588,21.5989770771099,20.6468352960453,7.46501553349526,8.61523992318149,15.9448712187558,23.9429508515031,18.3981994724749,10.4213340007993,35.5617177137393,38.1340168302433,31.6963362030877,25.1300909183609,26.4313086120003,28.3795405204693,3.34825304589526,3.906676722619,3.14114246384279,4.70585190424811,6.14740936462601,4.36959317728038,17.2478640626541,16.4230628575614,20.0065959856233,43.8139152834902,64.9714966013731,45.2553536433012,44.7188767870852,37.7963338388479,58.9385513896383,27.348564787411,47.1485392307374,47.7253194782299,31.1283917603496,43.8396163106298,26.2992767061496,53.2092292060742,65.5948814297321,65.2846345611365,16.2645375393183,24.0109594950008,85.4904731417329,118.663963508037,90.9414547131008,54.8268202248681,72.2330414004523,40.0241903510724,47.7921021694185,35.3345935070322,66.2710283816824,65.5979566626292,45.444086508748,43.0346164871881,54.2339084099912,52.8556228797066,47.7550644438602,36.8655679814984,53.0182876675379,44.8289453651807,43.2358097562111,45.5068288372251,39.3933827022176,38.8107549353098,49.7922309450498,54.3859820652573,61.3254176765239,32.0321797799369,39.3727828156353,32.4648227345879,23.2314446784974,35.358509352803,50.7321000139548,42.2354671340985,51.0750651290963,41.7119927791303,28.1210032253795,25.1992424464783,29.6805242588686,26.3377194982393,26.9485602570067,35.6727335589304,49.7746692207332,8.22665955842614,4.56047757855178,2.52762222507392,34.3693477954371,73.5383589557968,82.9791557372371,40.0751104829774,58.152906357619,50.7354093963329,50.3413619445759,63.9682566818234,152.559241874226,53.8885029660935,652.721497136481,36.2690326299448,34.779872738693,32.4637032136779,32.4866419600599,37.2783522436244,66.7540217186328,52.7805701169907,24.5238773000248,32.4698987411044,24.5960119707297,34.1818910826544,61.4141621559773,62.6775825861518,61.8219412395293,70.0512010374874,79.5275072297328,52.7781633181283,56.1354770214441,39.615512537773,28.9868241521517,37.6556910066175,18.5188833180097,41.8987826339906,28.9676651586176,34.031742533211,35.2649273735573,52.1839948490685,42.4056414142853,38.7925139677277,36.7358786449402,20.6945273215529,35.1737309112144,35.5421270811177,38.140057442398,38.9266148915837,30.9944428204728,30.2499740519677,40.8020246977911,25.2796747432765,34.7419674604865,32.9629659298887,23.4052122965117,29.0812314376559,23.4080679899319,28.17262353464,27.1534639811417,24.2199367233184,23.7184623645416,22.8032391189676,23.4698338158011,26.8232555358973,45.1460526217512,52.7757950143521,30.1171974096185,36.4453191383144,40.6645448843926,77.596991020163,55.1568722352965,27.0943402046714,36.4941781995691,48.2031446209629,42.4993109504602,42.6551296976129,49.6141470573423,43.5860965935946,35.381966456936,18.9811624617805,24.7048432086016,29.4062194296315,28.8486884459669,31.9741102875357,30.5598598942435,26.8011181844621,28.0789195288658,31.8642073601177,28.7906251776517,32.6852433451933,28.511185898344,37.4328300233518,37.3122561816495,44.6449952097256,59.1916693398205,58.4035267569914,68.1152344848339,51.5827571131639,36.3722330461085,42.6533019395651,36.6525243187312,33.471920029103,42.6883572761778,46.3419050242184,82.8564875858335,72.4744463684408,59.8543880750018,31.629005436018,94.8959416554684,73.6408908550363,37.1290950582254,45.9257378616095,77.6734069395021,38.9829231251536,31.4555743539005,25.5855013013981,26.4802333809293,27.9281395463317,35.5113265776649,35.4685024920161,35.5143239101194,45.8718269349016,36.0987444127503,41.6176946196041,44.7346849173965,46.27957514006,36.4515627625409,55.7927750575307,38.0733978673097,22.1293922858566,36.6995872585294,46.0780193264963,46.0641928307358,21.1476079535911,42.667586697539,41.6470849629459,46.8526493155966,42.6538327510942,43.2533524294119,42.1089494015725,57.464535750133,46.9580413942877,47.9299606974552,47.4345333535828,70.6906896127976,61.8858771508051,44.8725321241483,41.6990615945155,52.7904393512113,37.1686387351896,40.7871468740369,38.9997388484529,38.0982261106914,33.9597176812889,24.9022469834581,29.4608254211772,31.2639007350655,27.4502981356235,28.1272714562876,21.0837217149998,35.0660847043835,39.8314338731932,45.1953346018589,55.7535927103672,42.4387329362553,44.8670791114952,32.9982312563831,44.5927845831748,42.3206279269293,24.4058576386259,45.3320631648575,29.5508053393649,36.2749756471256,49.7310434223389,31.0611563380003,24.2325858326367,26.5908257586999,30.0225261728746,57.110993019237,35.5411432059534,25.5919716274396,29.4459298517842,23.7344255825911,28.2957051382522,28.3684934776088,27.5365056590046,33.0285427483833,36.6229930581723,20.0480829783174,38.75115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| ||
|short_description=p1@Letmd1 | |||
}} | }} |
Latest revision as of 12:12, 26 September 2015
Short description: | p1@Letmd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Letmd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:43 |
Association with transcript: | 46bp_to_uc007xrg.2, uc007xrh.2_5end |
EntrezGene: | Letmd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.10e-10 | 73 |
nervous system | 2.82e-10 | 75 |
neural tube | 1.23e-08 | 52 |
neural rod | 1.23e-08 | 52 |
future spinal cord | 1.23e-08 | 52 |
neural keel | 1.23e-08 | 52 |
regional part of nervous system | 1.60e-08 | 54 |
brain | 1.84e-07 | 47 |
future brain | 1.84e-07 | 47 |
tissue | 2.46e-07 | 349 |
regional part of brain | 3.96e-07 | 46 |
neurectoderm | 4.32e-07 | 64 |
neural plate | 4.32e-07 | 64 |
presumptive neural plate | 4.32e-07 | 64 |
gray matter | 4.97e-07 | 34 |